BLASTX nr result
ID: Coptis23_contig00013998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013998
(1109 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003615114.1| Aquaporin NIP1-1 [Medicago truncatula] gi|12... 81 4e-29
ref|XP_003544208.1| PREDICTED: nodulin-26-like [Glycine max] 76 7e-28
emb|CBI33542.3| unnamed protein product [Vitis vinifera] 73 1e-21
ref|XP_003633704.1| PREDICTED: probable aquaporin NIP-type-like ... 72 2e-21
ref|NP_198598.1| putative aquaporin NIP4-2 [Arabidopsis thaliana... 65 4e-20
>ref|XP_003615114.1| Aquaporin NIP1-1 [Medicago truncatula] gi|124361191|gb|ABN09163.1|
Major intrinsic protein [Medicago truncatula]
gi|355516449|gb|AES98072.1| Aquaporin NIP1-1 [Medicago
truncatula]
Length = 262
Score = 81.3 bits (199), Expect(2) = 4e-29
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -2
Query: 1102 VPSYIGAQLLGSILATTTLHVLYNHKVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFTV 923
VP Y+ QL+G+ LAT TL VLY+ KV++ + +S T+ LEAL+WE IITF+L+ T+
Sbjct: 112 VPVYVVCQLMGATLATLTLKVLYHDKVEIGVALTQFSNPTSYLEALVWESIITFILVLTI 171
Query: 922 CGVATDHR 899
CGVATDHR
Sbjct: 172 CGVATDHR 179
Score = 74.3 bits (181), Expect(2) = 4e-29
Identities = 41/115 (35%), Positives = 58/115 (50%)
Frame = -3
Query: 783 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQDPTFIRYSFAICR 604
+L+GVA+G +VL N+I+AG
Sbjct: 183 DLAGVAIGISVLINIIIAG----------------------------------------- 201
Query: 603 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATLVYGLVRVRAPDKSE 439
P TGASMNPARS+GPA+VS + N+W+YI+ P +GA AT++Y +RV P + E
Sbjct: 202 PTTGASMNPARSLGPAIVSGNYKNIWVYIIGPTIGAVFATVLYTFLRVTKPAQPE 256
>ref|XP_003544208.1| PREDICTED: nodulin-26-like [Glycine max]
Length = 270
Score = 76.3 bits (186), Expect(2) = 7e-28
Identities = 42/115 (36%), Positives = 60/115 (52%)
Frame = -3
Query: 783 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQDPTFIRYSFAICR 604
+L+GVA+G +VL NVI+AG
Sbjct: 183 DLTGVAIGISVLINVIIAG----------------------------------------- 201
Query: 603 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATLVYGLVRVRAPDKSE 439
P+TGASMNPARS+GPA+VS + N+W+YI++P+LGA +A+ +Y + V P K E
Sbjct: 202 PITGASMNPARSLGPAIVSGDYKNIWVYIISPILGAVSASTLYKFLEVNKPVKPE 256
Score = 75.1 bits (183), Expect(2) = 7e-28
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = -2
Query: 1102 VPSYIGAQLLGSILATTTLHVLYNHKVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFTV 923
VP Y+ Q++G+ LA TL VLY+ K D+ V Y ST+ LEA++WEFI T +LM T+
Sbjct: 112 VPIYVLCQMMGATLAPLTLKVLYHDKADIGVTVTKYLSSTSDLEAIVWEFITTSILMLTI 171
Query: 922 CGVATDHR 899
GVATDHR
Sbjct: 172 RGVATDHR 179
>emb|CBI33542.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 73.2 bits (178), Expect(2) = 1e-21
Identities = 50/143 (34%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Frame = -3
Query: 783 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQDPTFIRYSFAICR 604
EL+G+AVG T++ NV VAG
Sbjct: 188 ELAGIAVGMTIMLNVFVAG----------------------------------------- 206
Query: 603 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATLVYGLVRVRAPDKSEDTIKS 424
PV+GASMNPARSIGPALV + LW+Y++ P++GA A L Y L+R SE T S
Sbjct: 207 PVSGASMNPARSIGPALVKHVYKGLWVYVIGPIIGAIAGGLTYNLIRFTEKPLSELTKTS 266
Query: 423 ----V*NNRVLWKLLRAEMLNLY 367
+ V K L EM+ Y
Sbjct: 267 SLLRTISKSVPRKQLLVEMIGTY 289
Score = 57.0 bits (136), Expect(2) = 1e-21
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = -2
Query: 1105 QVPSYIGAQLLGSILATTTLHVLYNHKVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFT 926
QVP YI QL+GSILA+ TL ++N +D + G ++L+ E IITF+LMF
Sbjct: 119 QVPLYIIGQLMGSILASGTLSFMFN--IDREAYFGTVPAGSHG-QSLVLEIIITFLLMFV 175
Query: 925 VCGVATDHRA 896
+ GVATD RA
Sbjct: 176 ISGVATDSRA 185
>ref|XP_003633704.1| PREDICTED: probable aquaporin NIP-type-like [Vitis vinifera]
Length = 281
Score = 72.4 bits (176), Expect(2) = 2e-21
Identities = 43/117 (36%), Positives = 55/117 (47%)
Frame = -3
Query: 783 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQDPTFIRYSFAICR 604
EL+G+AVG T++ NV VAG
Sbjct: 188 ELAGIAVGMTIMLNVFVAG----------------------------------------- 206
Query: 603 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATLVYGLVRVRAPDKSEDT 433
PV+GASMNPARSIGPALV + LW+Y++ P++GA A L Y L+R SE T
Sbjct: 207 PVSGASMNPARSIGPALVKHVYKGLWVYVIGPIIGAIAGGLTYNLIRFTEKPLSELT 263
Score = 57.0 bits (136), Expect(2) = 2e-21
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = -2
Query: 1105 QVPSYIGAQLLGSILATTTLHVLYNHKVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFT 926
QVP YI QL+GSILA+ TL ++N +D + G ++L+ E IITF+LMF
Sbjct: 119 QVPLYIIGQLMGSILASGTLSFMFN--IDREAYFGTVPAGSHG-QSLVLEIIITFLLMFV 175
Query: 925 VCGVATDHRA 896
+ GVATD RA
Sbjct: 176 ISGVATDSRA 185
>ref|NP_198598.1| putative aquaporin NIP4-2 [Arabidopsis thaliana]
gi|32363363|sp|Q8W036.2|NIP42_ARATH RecName:
Full=Probable aquaporin NIP4-2; AltName: Full=NOD26-like
intrinsic protein 4-2; Short=AtNIP4;2; AltName:
Full=Nodulin-26-like major intrinsic protein 5;
Short=NodLikeMip5; Short=Protein NLM5
gi|10177172|dbj|BAB10361.1| pollen-specific membrane
integral protein [Arabidopsis thaliana]
gi|332006853|gb|AED94236.1| putative aquaporin NIP4-2
[Arabidopsis thaliana]
Length = 283
Score = 65.1 bits (157), Expect(2) = 4e-20
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Frame = -3
Query: 783 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQDPTFIRYSFAICR 604
EL+G+AVG T++ NV VAG
Sbjct: 188 ELAGIAVGMTIILNVFVAG----------------------------------------- 206
Query: 603 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATLVYGLVR-----VRAPDKSE 439
P++GASMNPARS+GPA+V ++ +W+YIV P +G A VY +R +R KS
Sbjct: 207 PISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNFMRFTDKPLRELTKSA 266
Query: 438 DTIKSV 421
++SV
Sbjct: 267 SFLRSV 272
Score = 60.1 bits (144), Expect(2) = 4e-20
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = -2
Query: 1105 QVPSYIGAQLLGSILATTTLHVLYNHKVDLTKIVNAYSGST---TGLEALIWEFIITFML 935
QVP YIGAQL GS+LA+ TL +++N A+ G+T + +AL+ E II+F+L
Sbjct: 119 QVPLYIGAQLTGSLLASLTLRLMFN------VTPKAFFGTTPTDSSGQALVAEIIISFLL 172
Query: 934 MFTVCGVATDHRA 896
MF + GVATD RA
Sbjct: 173 MFVISGVATDSRA 185