BLASTX nr result

ID: Coptis23_contig00013994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013994
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39849.3| unnamed protein product [Vitis vinifera]              213   3e-53
ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-...   213   3e-53
emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]   212   4e-53
ref|XP_003528822.1| PREDICTED: sufE-like protein, chloroplastic-...   210   2e-52
ref|XP_002519627.1| UV-induced protein uvi31, putative [Ricinus ...   209   2e-52

>emb|CBI39849.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  213 bits (541), Expect = 3e-53
 Identities = 109/163 (66%), Positives = 130/163 (79%)
 Frame = +3

Query: 69  EDLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLMPLDPKFKTKENKVQGCVSQVWVRAY 248
           EDLPPKLQEIV LFQ+V++ KAKYQQL+FYG+NL PLD ++KT ENKVQGCVSQVWVRAY
Sbjct: 148 EDLPPKLQEIVKLFQAVEEPKAKYQQLLFYGKNLTPLDAQYKTTENKVQGCVSQVWVRAY 207

Query: 249 LDADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKISTVSKDFIMSLGLQQSLTASRNN 428
           LD+D+NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++ LGLQQSLT SRNN
Sbjct: 208 LDSDKNVVFEADSDSVLTKGLAALLVQGLSGRPVEEVVRVSPDFVVLLGLQQSLTPSRNN 267

Query: 429 GFVNMLDLMKRKARQLSESGGVENNGAMVGNEAGAVNSEGTSE 557
           GF+NML LM++KA +L      + +  + G E   V   GT E
Sbjct: 268 GFLNMLKLMQKKALELYIE--AKRSSELTGVEDPKVGVAGTGE 308


>ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-like [Vitis vinifera]
          Length = 378

 Score =  213 bits (541), Expect = 3e-53
 Identities = 109/163 (66%), Positives = 130/163 (79%)
 Frame = +3

Query: 69  EDLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLMPLDPKFKTKENKVQGCVSQVWVRAY 248
           EDLPPKLQEIV LFQ+V++ KAKYQQL+FYG+NL PLD ++KT ENKVQGCVSQVWVRAY
Sbjct: 74  EDLPPKLQEIVKLFQAVEEPKAKYQQLLFYGKNLTPLDAQYKTTENKVQGCVSQVWVRAY 133

Query: 249 LDADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKISTVSKDFIMSLGLQQSLTASRNN 428
           LD+D+NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++ LGLQQSLT SRNN
Sbjct: 134 LDSDKNVVFEADSDSVLTKGLAALLVQGLSGRPVEEVVRVSPDFVVLLGLQQSLTPSRNN 193

Query: 429 GFVNMLDLMKRKARQLSESGGVENNGAMVGNEAGAVNSEGTSE 557
           GF+NML LM++KA +L      + +  + G E   V   GT E
Sbjct: 194 GFLNMLKLMQKKALELYIE--AKRSSELTGVEDPKVGVAGTGE 234


>emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]
          Length = 378

 Score =  212 bits (540), Expect = 4e-53
 Identities = 109/163 (66%), Positives = 130/163 (79%)
 Frame = +3

Query: 69  EDLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLMPLDPKFKTKENKVQGCVSQVWVRAY 248
           EDLPPKLQEIV LFQ+V++ KAKYQQL+FYG+NL PLD ++KT ENKVQGCVSQVWVRAY
Sbjct: 74  EDLPPKLQEIVKLFQAVEEPKAKYQQLLFYGKNLTPLDAQYKTTENKVQGCVSQVWVRAY 133

Query: 249 LDADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKISTVSKDFIMSLGLQQSLTASRNN 428
           LD+D++V FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF++ LGLQQSLT SRNN
Sbjct: 134 LDSDKSVVFEADSDSVLTKGLAALLVQGLSGRPVEEVVRVSPDFVVLLGLQQSLTPSRNN 193

Query: 429 GFVNMLDLMKRKARQLSESGGVENNGAMVGNEAGAVNSEGTSE 557
           GF+NML LM++KA +L      E +  + G E   V   GT E
Sbjct: 194 GFLNMLKLMQKKALELYIE--AERSSELTGVEDPKVGVAGTGE 234


>ref|XP_003528822.1| PREDICTED: sufE-like protein, chloroplastic-like [Glycine max]
          Length = 379

 Score =  210 bits (534), Expect = 2e-52
 Identities = 115/173 (66%), Positives = 134/173 (77%), Gaps = 9/173 (5%)
 Frame = +3

Query: 69  EDLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLMPLDPKFKTKENKVQGCVSQVWVRAY 248
           EDLPPKLQEIV+LFQSV + KAKY+QL+FYG+NL PL+P+FKT +NKVQGCVSQVWVRAY
Sbjct: 74  EDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPQFKTNDNKVQGCVSQVWVRAY 133

Query: 249 LDADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKISTVSKDFIMSLGLQQSLTASRNN 428
           LD ++NV +EADSDS LTKGLAALLVQGLSG+PV++I  V+ DF   LGLQQSLT SRNN
Sbjct: 134 LDPNRNVVYEADSDSGLTKGLAALLVQGLSGRPVNEIIRVTPDFATLLGLQQSLTPSRNN 193

Query: 429 GFVNMLDLMKRKARQL---SESGGVENNG---AMVGNEAGAVNSE---GTSEI 560
           GF+NML LM+RKA  L   +E GG E N     +V N A    S    G SEI
Sbjct: 194 GFLNMLKLMQRKALLLYVEAEKGGGEFNSETDVIVENSASGGESSDLGGDSEI 246


>ref|XP_002519627.1| UV-induced protein uvi31, putative [Ricinus communis]
           gi|223541217|gb|EEF42772.1| UV-induced protein uvi31,
           putative [Ricinus communis]
          Length = 304

 Score =  209 bits (533), Expect = 2e-52
 Identities = 109/182 (59%), Positives = 138/182 (75%)
 Frame = +3

Query: 69  EDLPPKLQEIVNLFQSVDDNKAKYQQLMFYGRNLMPLDPKFKTKENKVQGCVSQVWVRAY 248
           E+LPPKL+EIV LFQSV + KAKY+QL+FYG+NL PLD +FKT+ENKV+GCVSQVWVRAY
Sbjct: 7   EELPPKLREIVKLFQSVQEPKAKYEQLLFYGKNLTPLDTQFKTRENKVEGCVSQVWVRAY 66

Query: 249 LDADQNVYFEADSDSALTKGLAALLVQGLSGQPVSKISTVSKDFIMSLGLQQSLTASRNN 428
           LD ++NV FEADSDS LTKGLAALLVQGLSG+PV ++  VS DF + LGLQQSLT SRNN
Sbjct: 67  LDKEKNVVFEADSDSVLTKGLAALLVQGLSGRPVDEVLKVSPDFAVLLGLQQSLTPSRNN 126

Query: 429 GFVNMLDLMKRKARQLSESGGVENNGAMVGNEAGAVNSEGTSEIVDDLTTETSEIQESKF 608
           GF+NML LM++KA +L   G  +  G+  GN+  +  +E  S  +     + S I  ++ 
Sbjct: 127 GFLNMLKLMQKKALEL-YVGAEKGTGSGSGNKIDSTQNEVNSSNLGKGGDQNSSIGSNED 185

Query: 609 IG 614
           +G
Sbjct: 186 LG 187


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