BLASTX nr result

ID: Coptis23_contig00013993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013993
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-...   174   2e-41
emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]   172   7e-41
ref|XP_004139770.1| PREDICTED: sufE-like protein, chloroplastic-...   169   4e-40
ref|XP_003636896.1| SufE-like protein [Medicago truncatula] gi|3...   168   1e-39
ref|XP_002299058.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39

>ref|XP_002263467.1| PREDICTED: sufE-like protein, chloroplastic-like [Vitis vinifera]
          Length = 378

 Score =  174 bits (441), Expect = 2e-41
 Identities = 111/212 (52%), Positives = 134/212 (63%), Gaps = 21/212 (9%)
 Frame = -1

Query: 745 VSKISTVSKDFIMSLGLQQSLTASRNNGFVNMLDLMKRKARQL-------SESGGVENNG 587
           V ++  VS DF++ LGLQQSLT SRNNGF+NML LM++KA +L       SE  GVE+  
Sbjct: 167 VEEVVRVSPDFVVLLGLQQSLTPSRNNGFLNMLKLMQKKALELYIEAKRSSELTGVEDPK 226

Query: 586 AMVGNEAES-LNPTQAGAVNSEGTSE----IVDDLTTETSEI--QESKFIG-------LG 449
             V    E+ LN      V +   S     I D +   +SE+  ++S   G       LG
Sbjct: 227 VGVAGTGETGLNSNVEKPVRTSNLSSKIGGIEDSVVRLSSEVSGRDSNLGGGATSETALG 286

Query: 448 SRGERIKDLLVREFSPIELEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKR 269
           SRG RIK++L R  SPIEL VEDIS+Q            ETHFN+K+VS+ FEGKSLVKR
Sbjct: 287 SRGGRIKEILERALSPIELLVEDISYQHAGHAGVRGSDGETHFNLKVVSEEFEGKSLVKR 346

Query: 268 HRLVYDLLQNELQTGLHALSIVAKTPSEVSGR 173
           HR+VYDLLQ ELQ GLHALSIVAKTPSEVSGR
Sbjct: 347 HRVVYDLLQEELQNGLHALSIVAKTPSEVSGR 378


>emb|CAN70939.1| hypothetical protein VITISV_001965 [Vitis vinifera]
          Length = 378

 Score =  172 bits (436), Expect = 7e-41
 Identities = 111/212 (52%), Positives = 133/212 (62%), Gaps = 21/212 (9%)
 Frame = -1

Query: 745 VSKISTVSKDFIMSLGLQQSLTASRNNGFVNMLDLMKRKARQL-------SESGGVENNG 587
           V ++  VS DF++ LGLQQSLT SRNNGF+NML LM++KA +L       SE  GVE+  
Sbjct: 167 VEEVVRVSPDFVVLLGLQQSLTPSRNNGFLNMLKLMQKKALELYIEAERSSELTGVEDPK 226

Query: 586 AMVGNEAES-LNPTQAGAVNSEGTSE----IVDDLTTETSEI--QESKFIG-------LG 449
             V    E+ LN      V     S     I D +   +SE+  ++S   G       LG
Sbjct: 227 VGVAGTGETGLNSNVEKPVRXLNLSSKIGGIEDSVVRLSSEVSGRDSNLGGGATSETALG 286

Query: 448 SRGERIKDLLVREFSPIELEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKR 269
           SRG RIK++L R  SPIEL VEDIS+Q            ETHFN+K+VS+ FEGKSLVKR
Sbjct: 287 SRGGRIKEILERALSPIELLVEDISYQHAGHAGVRGSDGETHFNLKVVSEEFEGKSLVKR 346

Query: 268 HRLVYDLLQNELQTGLHALSIVAKTPSEVSGR 173
           HR+VYDLLQ ELQ GLHALSIVAKTPSEVSGR
Sbjct: 347 HRVVYDLLQEELQNGLHALSIVAKTPSEVSGR 378


>ref|XP_004139770.1| PREDICTED: sufE-like protein, chloroplastic-like [Cucumis sativus]
           gi|449482614|ref|XP_004156349.1| PREDICTED: sufE-like
           protein, chloroplastic-like [Cucumis sativus]
          Length = 342

 Score =  169 bits (429), Expect = 4e-40
 Identities = 101/195 (51%), Positives = 132/195 (67%), Gaps = 7/195 (3%)
 Frame = -1

Query: 745 VSKISTVSKDFIMSLGLQQSLTASRNNGFVNMLDLMKRKARQL---SESG-GVENNGAMV 578
           V +I  VS DF++ LGLQQSLT SRNNGF+NML LM++KA  L   SE G G   + +  
Sbjct: 160 VDEILRVSPDFVVLLGLQQSLTPSRNNGFLNMLKLMQKKALALLVESEKGNGSAVSSSQT 219

Query: 577 GNEAESLNP---TQAGAVNSEGTSEIVDDLTTETSEIQESKFIGLGSRGERIKDLLVREF 407
            + AE + P   T+   V+S+     + D  +++S++       LGSRG+RIK++L RE 
Sbjct: 220 DDSAEKVKPESNTEKSVVDSK-----LGDKGSQSSDV-------LGSRGKRIKEILEREL 267

Query: 406 SPIELEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQT 227
           +P+EL VEDIS+Q            ETHFN+K+VSK FEGKSLVKRHRLVY+LLQ+ELQ+
Sbjct: 268 NPVELYVEDISYQHAGHAGVRGNDGETHFNLKVVSKEFEGKSLVKRHRLVYNLLQDELQS 327

Query: 226 GLHALSIVAKTPSEV 182
           GLHALSI AKTP E+
Sbjct: 328 GLHALSISAKTPDEI 342


>ref|XP_003636896.1| SufE-like protein [Medicago truncatula] gi|355502831|gb|AES84034.1|
           SufE-like protein [Medicago truncatula]
          Length = 328

 Score =  168 bits (426), Expect = 1e-39
 Identities = 100/191 (52%), Positives = 126/191 (65%), Gaps = 3/191 (1%)
 Frame = -1

Query: 745 VSKISTVSKDFIMSLGLQQSLTASRNNGFVNMLDLMKRKARQL---SESGGVENNGAMVG 575
           V++I  V+ DF+M LGLQQSLT SRNNGF+NML LM++KA  L   +E G  E++   +G
Sbjct: 141 VNEIIRVTPDFVMHLGLQQSLTPSRNNGFLNMLKLMQKKALMLYVEAEKGTSESDS--IG 198

Query: 574 NEAESLNPTQAGAVNSEGTSEIVDDLTTETSEIQESKFIGLGSRGERIKDLLVREFSPIE 395
           N   S     +   NS G S +   L  +     + + + LG RG+RIK  L +E  PIE
Sbjct: 199 N---SDLKNDSFVENSSGPS-VTPSLGVDFGSEVDDENVELGGRGKRIKKKLEKELQPIE 254

Query: 394 LEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKRHRLVYDLLQNELQTGLHA 215
           LEVED+S+Q            ETHFNVK+VSK F+GKSLVKRHRL+Y LLQ+EL +GLHA
Sbjct: 255 LEVEDVSYQHAGHAGVRGSDGETHFNVKVVSKEFQGKSLVKRHRLIYSLLQDELDSGLHA 314

Query: 214 LSIVAKTPSEV 182
           LSIVAKTPSEV
Sbjct: 315 LSIVAKTPSEV 325


>ref|XP_002299058.1| predicted protein [Populus trichocarpa] gi|222846316|gb|EEE83863.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  167 bits (424), Expect = 2e-39
 Identities = 104/211 (49%), Positives = 132/211 (62%), Gaps = 21/211 (9%)
 Frame = -1

Query: 745 VSKISTVSKDFIMSLGLQQSLTASRNNGFVNMLDLMKRKARQL-----SESGGVENNGAM 581
           V ++  VS DF++SLGLQQSLT SRNNGF+NML LM++K  +L       SG VE++   
Sbjct: 100 VEEVLRVSPDFVVSLGLQQSLTPSRNNGFLNMLKLMQKKTLELYMEAEKGSGAVESSKLR 159

Query: 580 VGN-----EAESLNPTQAGAVNSEGTSEIV-----------DDLTTETSEIQESKFIGLG 449
            G+     + E+L       V S G + +            + L  E SE + S    LG
Sbjct: 160 DGSGENEGKIENLGSNGDVGVESSGDNSVKGLSFDAKIDGGEGLGPEGSE-KGSNSKALG 218

Query: 448 SRGERIKDLLVREFSPIELEVEDISHQXXXXXXXXXXXVETHFNVKIVSKVFEGKSLVKR 269
           SRG R+++ L RE SP+ELEVEDIS+Q            ETHFNVK+VSK F+GKSLVKR
Sbjct: 219 SRGIRVREKLERELSPVELEVEDISYQHAGHAGVRGSNGETHFNVKVVSKEFDGKSLVKR 278

Query: 268 HRLVYDLLQNELQTGLHALSIVAKTPSEVSG 176
           HRL+Y+LLQ+ELQ+GLHALSIVAKT  EV G
Sbjct: 279 HRLIYNLLQDELQSGLHALSIVAKTLDEVDG 309


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