BLASTX nr result

ID: Coptis23_contig00013983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013983
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318264.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_002270630.2| PREDICTED: alpha-L-fucosidase 1-like [Vitis ...   385   e-105
ref|XP_002322431.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_003592377.1| Alpha-L-fucosidase [Medicago truncatula] gi|...   374   e-101
ref|XP_003536497.1| PREDICTED: alpha-L-fucosidase 1-like [Glycin...   367   2e-99

>ref|XP_002318264.1| predicted protein [Populus trichocarpa] gi|222858937|gb|EEE96484.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  387 bits (994), Expect = e-105
 Identities = 183/265 (69%), Positives = 218/265 (82%), Gaps = 1/265 (0%)
 Frame = -2

Query: 836  INIFSDAGLDVRWVGNEKGYAGSTCWSTINRTLLTIG-GNMEDYLNKGDPRGTDWLPAEC 660
            INIFSDAG DVRWVGNE G+AGSTCWSTINRT L+IG G++ DYLN GD +GTDWLPAEC
Sbjct: 219  INIFSDAGPDVRWVGNEMGFAGSTCWSTINRTSLSIGNGSIVDYLNTGDSKGTDWLPAEC 278

Query: 659  DVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMGLLSANDVLRLREFH 480
            DVSIR GWFWHK+++ K LS LL+I+YKSVGRNCVLL NVPPNT GL+S NDV RL+EF 
Sbjct: 279  DVSIRKGWFWHKSESPKRLSELLDIYYKSVGRNCVLLFNVPPNTTGLISENDVQRLKEFR 338

Query: 479  EAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWAPGDEANDEHWIEFV 300
             AIDTIF+ N AE   ++ASSQRG    +FG E V+D DHLW+YWAP DE ++++WIEF 
Sbjct: 339  GAIDTIFSTNLAESCFVRASSQRGGKDGDFGPENVLDGDHLWTYWAPKDEESEDNWIEFK 398

Query: 299  GNGKILKFNVVRIQEAIGLGQRIKHHEVYADGKLIAKSTTIGYKRLHRLDEGVIYAHRVR 120
               K L+FNV+RIQEAIGLGQRIK HEVY DG+ +AK TT+G+KRLHRL++GV+  H V 
Sbjct: 399  CIDK-LRFNVIRIQEAIGLGQRIKQHEVYVDGRKVAKGTTVGHKRLHRLEKGVVKGHIVS 457

Query: 119  IVIKESRGLPLISSIGLHFDPFWHP 45
            I I +SR +PL+SSIGLH+DPFWHP
Sbjct: 458  IKILKSRAVPLMSSIGLHYDPFWHP 482


>ref|XP_002270630.2| PREDICTED: alpha-L-fucosidase 1-like [Vitis vinifera]
          Length = 493

 Score =  385 bits (988), Expect = e-105
 Identities = 181/265 (68%), Positives = 213/265 (80%), Gaps = 1/265 (0%)
 Frame = -2

Query: 836  INIFSDAGLDVRWVGNEKGYAGSTCWSTINRTLLTIGG-NMEDYLNKGDPRGTDWLPAEC 660
            INIFSDAG DVRWVGNEKG+AGSTCWSTINRT L+IG  ++ DY+N GDP+GTDWLP EC
Sbjct: 219  INIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNASIVDYINTGDPKGTDWLPPEC 278

Query: 659  DVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMGLLSANDVLRLREFH 480
            DVSIR GWFWHK+Q  K LS LL I+Y SVGRNCVLL NVPPNT GL+S  DV RLREF 
Sbjct: 279  DVSIRPGWFWHKSQKPKKLSKLLEIYYNSVGRNCVLLFNVPPNTTGLISETDVQRLREFR 338

Query: 479  EAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWAPGDEANDEHWIEFV 300
             A+DTIF+ N  E   IKASS+RG    +FG E V+D DHLW++WAP +E +DEHW+E  
Sbjct: 339  NAVDTIFSTNLVENGAIKASSRRGGKDSDFGPENVLDSDHLWTFWAPREE-DDEHWLEIK 397

Query: 299  GNGKILKFNVVRIQEAIGLGQRIKHHEVYADGKLIAKSTTIGYKRLHRLDEGVIYAHRVR 120
               + L+FNVVRIQEAIGLGQRIK HE+YADGKL+ K TT+G+KRLHRL  GV++A  ++
Sbjct: 398  AANEGLRFNVVRIQEAIGLGQRIKRHEIYADGKLVGKGTTVGHKRLHRLG-GVVHARSLK 456

Query: 119  IVIKESRGLPLISSIGLHFDPFWHP 45
            + I ESRG+PL+SS GLHFDPFWHP
Sbjct: 457  VRILESRGVPLVSSFGLHFDPFWHP 481


>ref|XP_002322431.1| predicted protein [Populus trichocarpa] gi|222869427|gb|EEF06558.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  376 bits (965), Expect = e-102
 Identities = 178/265 (67%), Positives = 212/265 (80%), Gaps = 1/265 (0%)
 Frame = -2

Query: 836  INIFSDAGLDVRWVGNEKGYAGSTCWSTINRTLLTIG-GNMEDYLNKGDPRGTDWLPAEC 660
            INIFSDAG DVRWVGNE G+AG +CWSTINRT L+IG G++ DYLN GDP GTDWLPAEC
Sbjct: 220  INIFSDAGPDVRWVGNENGFAGDSCWSTINRTSLSIGNGSIVDYLNTGDPEGTDWLPAEC 279

Query: 659  DVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMGLLSANDVLRLREFH 480
            DVSIR GWFWHK+++ K LS LL+I+YKSVGRNCVLL NVPPN+ GL+S +D  RLREF 
Sbjct: 280  DVSIRRGWFWHKSESPKKLSMLLDIYYKSVGRNCVLLFNVPPNSTGLVSEDDAQRLREFR 339

Query: 479  EAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWAPGDEANDEHWIEFV 300
             AIDTIF+ N A+    KASSQRG    +FG + V+D DHLW+YWAP DE   ++WIE  
Sbjct: 340  GAIDTIFSTNLADKCLTKASSQRGDQDSDFGPQNVLDSDHLWTYWAPKDEEFKDNWIEIK 399

Query: 299  GNGKILKFNVVRIQEAIGLGQRIKHHEVYADGKLIAKSTTIGYKRLHRLDEGVIYAHRVR 120
               + L+FNV+RIQEAIGLGQRIK HEVY DGK +AK TT+G+KRLHR++EGV+    VR
Sbjct: 400  CIDE-LRFNVIRIQEAIGLGQRIKQHEVYVDGKKVAKGTTVGHKRLHRIEEGVVKGRTVR 458

Query: 119  IVIKESRGLPLISSIGLHFDPFWHP 45
            I I +SR +PLISS+GLH+DPFWHP
Sbjct: 459  IQILKSRAVPLISSVGLHYDPFWHP 483


>ref|XP_003592377.1| Alpha-L-fucosidase [Medicago truncatula] gi|355481425|gb|AES62628.1|
            Alpha-L-fucosidase [Medicago truncatula]
          Length = 490

 Score =  374 bits (960), Expect = e-101
 Identities = 180/267 (67%), Positives = 208/267 (77%), Gaps = 2/267 (0%)
 Frame = -2

Query: 836  INIFSDAGLDVRWVGNEKGYAGSTCWSTINRTLLTIGG-NMEDYLNKGDPRGTDWLPAEC 660
            INIFSDAG DVRWVG+E G AG TCWSTINRT L+IG  N+  YLN GDP+GTDWLPAEC
Sbjct: 220  INIFSDAGPDVRWVGDETGTAGDTCWSTINRTSLSIGASNITQYLNTGDPKGTDWLPAEC 279

Query: 659  DVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMGLLSANDVLRLREFH 480
            DVSIR GWFWHK+++ K LS LL+I+YKSVGRNCVLLLNVPPNT GL+S ND  RL+EF 
Sbjct: 280  DVSIRPGWFWHKSESPKKLSDLLDIYYKSVGRNCVLLLNVPPNTTGLISENDAHRLKEFR 339

Query: 479  EAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWAP-GDEANDEHWIEF 303
             AIDTIF  N AE   +K SSQRG     FG E ++D DHLWSYW P  D+   +HWIE 
Sbjct: 340  SAIDTIFHKNIAENRYVKVSSQRGGKEGGFGPENMLDSDHLWSYWTPREDDKEKDHWIEI 399

Query: 302  VGNGKILKFNVVRIQEAIGLGQRIKHHEVYADGKLIAKSTTIGYKRLHRLDEGVIYAHRV 123
             GN   L+FNV+RIQEAIGLGQRI+ +E+Y DGK I + TTIGYKRLHRLD  V++A  V
Sbjct: 400  WGNDGSLRFNVIRIQEAIGLGQRIERYEIYVDGKSIIQGTTIGYKRLHRLDGDVVHARVV 459

Query: 122  RIVIKESRGLPLISSIGLHFDPFWHPK 42
            RI   ++RG+PLISSIGLHFDPFWH +
Sbjct: 460  RIRFIKARGVPLISSIGLHFDPFWHSR 486


>ref|XP_003536497.1| PREDICTED: alpha-L-fucosidase 1-like [Glycine max]
          Length = 487

 Score =  367 bits (941), Expect = 2e-99
 Identities = 178/267 (66%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
 Frame = -2

Query: 836  INIFSDAGLDVRWVGNEKGYAGSTCWSTINRTLLTIGG-NMEDYLNKGDPRGTDWLPAEC 660
            INIFSDAG DVRWVG+E G AG TCWSTINRT L+IG  ++  Y+N GDP+GTDWLPAEC
Sbjct: 221  INIFSDAGPDVRWVGDETGSAGYTCWSTINRTSLSIGSPDIIQYINTGDPKGTDWLPAEC 280

Query: 659  DVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMGLLSANDVLRLREFH 480
            DVSIR GWFWHK+++ K LS LL+I+Y SVGRNCVLLLNVPPNT GL++  D  RL+EF 
Sbjct: 281  DVSIRKGWFWHKSESPKKLSELLDIYYNSVGRNCVLLLNVPPNTSGLITEVDANRLKEFR 340

Query: 479  EAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWAPGDEAND-EHWIEF 303
             AI TIF  N AE   +K SSQRG     FG EK++D DHLWSYWAP D+ ++ +HW+E 
Sbjct: 341  SAIKTIFHQNLAEDCFVKVSSQRG----GFGPEKMLDSDHLWSYWAPRDDDDEKDHWVEI 396

Query: 302  VGNGKILKFNVVRIQEAIGLGQRIKHHEVYADGKLIAKSTTIGYKRLHRLDEGVIYAHRV 123
                  L+FNVVRIQEAIGLGQRIK HE+Y DGKLI K+TT+GYKRLHRLD G ++A  V
Sbjct: 397  WAKEGRLRFNVVRIQEAIGLGQRIKRHEIYVDGKLIIKATTVGYKRLHRLDGGEVHARGV 456

Query: 122  RIVIKESRGLPLISSIGLHFDPFWHPK 42
            RI I+++RG+PLISSIGLH+DPFWH K
Sbjct: 457  RIRIRKARGVPLISSIGLHYDPFWHSK 483


Top