BLASTX nr result

ID: Coptis23_contig00013955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013955
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284668.1| PREDICTED: NAC domain-containing protein 72 ...   144   3e-32
emb|CAN62145.1| hypothetical protein VITISV_007842 [Vitis vinifera]   144   3e-32
gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum] gi|2...   142   1e-31
ref|XP_002316917.1| NAC domain protein, IPR003441 [Populus trich...   141   2e-31
ref|XP_002329109.1| NAC domain protein, IPR003441 [Populus trich...   137   3e-30

>ref|XP_002284668.1| PREDICTED: NAC domain-containing protein 72 [Vitis vinifera]
           gi|302143055|emb|CBI20350.3| unnamed protein product
           [Vitis vinifera]
          Length = 333

 Score =  144 bits (363), Expect = 3e-32
 Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 17/197 (8%)
 Frame = -2

Query: 850 WIMHEYRLSESTRKSGSSRLDEWVLCRIYKKSSGAQKTISSRVTGEVXXXXXXXXXXXXS 671
           WIMHEYRL E++RK+GSS+LD+WVLCRIYKK+S + K I++ +  +             S
Sbjct: 132 WIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSNSSKPIAAVLPSKA--HSNGSSSSSSS 189

Query: 670 YFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNTANMNSLQN--- 512
           + DDVLESLPE++DR F   R+NSL+  Q DEK+NF N   G F+W   A ++SLQ    
Sbjct: 190 HLDDVLESLPEIDDRFFSPNRMNSLRVSQPDEKVNFHNLGSGNFDWATLAGVSSLQELVS 249

Query: 511 --YSQIQRP-----GNDSYYSSVPKTCHVEEEVESGFGLKSFD---NSGLTQQSSFGLAR 362
              S  Q P      N+ Y  S+P     EEEV+SG   +  D   N G   Q+S   ++
Sbjct: 250 GVQSHAQPPAAVNNSNEMYVPSLPPLIQAEEEVQSGLRTQRVDPVMNQGFFPQNSNAFSQ 309

Query: 361 TFSDAFDPFGLRYMANP 311
           +FS++ DPFG RY   P
Sbjct: 310 SFSNSLDPFGFRYPTQP 326


>emb|CAN62145.1| hypothetical protein VITISV_007842 [Vitis vinifera]
          Length = 333

 Score =  144 bits (363), Expect = 3e-32
 Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 17/197 (8%)
 Frame = -2

Query: 850 WIMHEYRLSESTRKSGSSRLDEWVLCRIYKKSSGAQKTISSRVTGEVXXXXXXXXXXXXS 671
           WIMHEYRL E++RK+GSS+LD+WVLCRIYKK+S + K I++ +  +             S
Sbjct: 132 WIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSNSSKPIAAVLPSKA--HSNGSSSSSSS 189

Query: 670 YFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNTANMNSLQN--- 512
           + DDVLESLPE++DR F   R+NSL+  Q DEK+NF N   G F+W   A ++SLQ    
Sbjct: 190 HLDDVLESLPEIDDRFFSPNRMNSLRVSQPDEKVNFHNLGSGNFDWATLAGVSSLQELVS 249

Query: 511 --YSQIQRP-----GNDSYYSSVPKTCHVEEEVESGFGLKSFD---NSGLTQQSSFGLAR 362
              S  Q P      N+ Y  S+P     EEEV+SG   +  D   N G   Q+S   ++
Sbjct: 250 GVQSHAQPPAAVNNSNEMYVPSLPPLIQAEEEVQSGLRTQRVDPVMNQGFFPQNSNAFSQ 309

Query: 361 TFSDAFDPFGLRYMANP 311
           +FS++ DPFG RY   P
Sbjct: 310 SFSNSLDPFGFRYPTQP 326


>gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum]
           gi|206584355|gb|ACI15350.1| NAC domain protein NAC4
           [Gossypium hirsutum]
          Length = 346

 Score =  142 bits (358), Expect = 1e-31
 Identities = 96/219 (43%), Positives = 124/219 (56%), Gaps = 30/219 (13%)
 Frame = -2

Query: 850 WIMHEYRLSESTRKSGSSRLDEWVLCRIYKKSSGAQKTISSRVTGEVXXXXXXXXXXXXS 671
           WIMHEYRL E++RKSGSS+LD+WVLCRIYKK+S  QK +SS  + E             S
Sbjct: 132 WIMHEYRLIETSRKSGSSKLDDWVLCRIYKKNSSGQKPLSSVSSRE--QSTNGSSSSSSS 189

Query: 670 YFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNTANMNSL----- 518
             DD+LESLPEL+DR F LPRVNS KT Q D KL FQ+   G  +W +   ++S+     
Sbjct: 190 QLDDMLESLPELDDRFFALPRVNSFKTLQNDVKLGFQSLGIGNLDWGSLGGLSSVPELVP 249

Query: 517 --QNYSQIQRPG------NDSYYSSVPKTC------------HVEEEVESGFGLKSFDNS 398
             Q  +Q Q  G      ++ Y S++P T              VEEEV+SG   +  DNS
Sbjct: 250 SGQTQTQTQSQGITSYGNSNVYVSTMPPTLCQMDVSTNKIGNSVEEEVQSGLRTQRADNS 309

Query: 397 GLTQQSSFGL-ARTFSDAFDPFGLRYMANPVSGRFEFGQ 284
           G+ QQ+S  L +  FS++ DP+G R      SG F F Q
Sbjct: 310 GIFQQNSNVLNSHNFSNSIDPYGFRCPTQ--SGGFGFRQ 346


>ref|XP_002316917.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222859982|gb|EEE97529.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 342

 Score =  141 bits (356), Expect = 2e-31
 Identities = 97/209 (46%), Positives = 119/209 (56%), Gaps = 26/209 (12%)
 Frame = -2

Query: 850 WIMHEYRLSESTRKSGSSRLDEWVLCRIYKK-SSGAQKTISSRVTGEVXXXXXXXXXXXX 674
           WIMHEYRL ES+RKSGS++LDEWVLCRIYKK SS AQK++SS  + E             
Sbjct: 132 WIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSMSSVSSKE--YSTNGSCSSSS 189

Query: 673 SYFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNTANMNSLQNYS 506
           S+ +DVL+SL E++DR F LPR NSLK  Q +EK+N  N   G F+W   A +NSL    
Sbjct: 190 SHLEDVLDSLTEIDDRLFALPRTNSLKQMQHEEKINLANLGSGSFDWATLAGLNSLPELL 249

Query: 505 QIQRPG--------NDSYYSSVPKTCH-----------VEEEVESGFGLKSFD-NSGLTQ 386
           Q Q PG        N  +  S+P  CH           VEEEV+SG   +  D NSG  Q
Sbjct: 250 QTQ-PGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTSVEEEVQSGVRTQLRDGNSGAFQ 308

Query: 385 QSSFGLARTFSDA-FDPFGLRYMANPVSG 302
           Q+S  +   FS    DP+ LRY   P SG
Sbjct: 309 QNSGVMTPNFSSTLLDPYELRYSTQPGSG 337


>ref|XP_002329109.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222869778|gb|EEF06909.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 343

 Score =  137 bits (345), Expect = 3e-30
 Identities = 90/213 (42%), Positives = 117/213 (54%), Gaps = 24/213 (11%)
 Frame = -2

Query: 850 WIMHEYRLSESTRKSGSSRLDEWVLCRIYKKSSGAQKTISSRVTGEVXXXXXXXXXXXXS 671
           WIMHEYRL ES+RK GS++LDEWVLCRIYKK S A +   S V+ +              
Sbjct: 132 WIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSGVSSKEPSTNSPSSSFSSH 191

Query: 670 YFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQ---NGKFEWNNTANMNSLQNYSQ 503
           + DDVL+ LPE++DR   LPR NSLK  Q +EK+N     +G F+W   A +NS+    Q
Sbjct: 192 FDDDVLDPLPEIDDRFLDLPRTNSLKPRQHEEKINLATLGSGSFDWATLAGLNSVPQLVQ 251

Query: 502 IQ-------RPGNDSYYSSVPKTCH-----------VEEEVESGF--GLKSFDNSGLTQQ 383
            Q          +D Y  S+ + CH           VEEEV+SG    L S  N    QQ
Sbjct: 252 TQPCVSYSNSNVHDVYVPSMSQLCHMDTSAERMENLVEEEVQSGVRTRLDSVGNPVFFQQ 311

Query: 382 SSFGLARTFSDAFDPFGLRYMANPVSGRFEFGQ 284
           +S    ++FS++FDP+GLR+   P SG F F Q
Sbjct: 312 NSSVRPQSFSNSFDPYGLRHSIQPGSG-FGFNQ 343


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