BLASTX nr result

ID: Coptis23_contig00013942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013942
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arab...    84   3e-14
emb|CBI16413.3| unnamed protein product [Vitis vinifera]               81   2e-13
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...    81   2e-13
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] ...    80   5e-13

>ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp.
           lyrata] gi|297317373|gb|EFH47795.1| hypothetical protein
           ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 42/75 (56%), Positives = 51/75 (68%)
 Frame = +1

Query: 454 MNSFIYFTLISLFLNGFYLHALAKECTNIPTVLSSKTFRSELLASKNDSWREEMFAHYPH 633
           M S +  T++ L    F L  +AKECTN PT LSS TFRSELL SKN++ + E+F+HY H
Sbjct: 1   MKSGLIITIVLLLYTSFVLVCVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-H 59

Query: 634 LTHTDDETWSDLFPR 678
           LT TDD  WS L PR
Sbjct: 60  LTPTDDAAWSTLLPR 74


>emb|CBI16413.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = +1

Query: 517 LAKECTNIPTVLSSKTFRSELLASKNDSWREEMFAHYPHLTHTDDETWSDLFPR 678
           L KECTN+PT LSS +FR ELLAS N+SW+ EMF HY HL HTDD  WS+L PR
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPR 75


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = +1

Query: 517 LAKECTNIPTVLSSKTFRSELLASKNDSWREEMFAHYPHLTHTDDETWSDLFPR 678
           L KECTN+PT LSS +FR ELLAS N+SW+ EMF HY HL HTDD  WS+L PR
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPR 75


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 38/75 (50%), Positives = 51/75 (68%)
 Frame = +1

Query: 454 MNSFIYFTLISLFLNGFYLHALAKECTNIPTVLSSKTFRSELLASKNDSWREEMFAHYPH 633
           MN  +   ++S+  +      ++KECTNIPT LSS +FR ELL+S+N++W+EEMF HY H
Sbjct: 1   MNGLLVLAMVSMLCS----FGISKECTNIPTQLSSHSFRYELLSSQNETWKEEMFEHY-H 55

Query: 634 LTHTDDETWSDLFPR 678
           L  TDD  WS L PR
Sbjct: 56  LIPTDDSAWSSLLPR 70


>ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis
           thaliana] gi|26451123|dbj|BAC42665.1| unknown protein
           [Arabidopsis thaliana] gi|332004451|gb|AED91834.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 861

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = +1

Query: 454 MNSFIYFTL-ISLFLNGFYLHALAKECTNIPTVLSSKTFRSELLASKNDSWREEMFAHYP 630
           M S +  T+ + L+ + F L ++AKECTN PT LSS TFRSELL SKN++ + E+F+HY 
Sbjct: 1   MKSGLIITIALLLYTSSFVLVSVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY- 59

Query: 631 HLTHTDDETWSDLFPR 678
           HLT  DD  WS L PR
Sbjct: 60  HLTPADDSAWSSLLPR 75


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