BLASTX nr result

ID: Coptis23_contig00013932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013932
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription...   196   2e-47
ref|XP_002304640.1| AP2/ERF domain-containing transcription fact...   172   2e-40
emb|CAN81030.1| hypothetical protein VITISV_011003 [Vitis vinifera]   161   4e-37
ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, puta...   151   3e-34
ref|XP_002297877.1| AP2/ERF domain-containing transcription fact...   147   8e-33

>ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription factor ERF114-like
            [Vitis vinifera]
          Length = 315

 Score =  196 bits (497), Expect = 2e-47
 Identities = 123/286 (43%), Positives = 149/286 (52%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1281 KAFKVDRRHGKRPLPSDASEEKAEENNLSFPSYPSLRSDQDMTAMVSALARIIDTGQDNP 1102
            +A+KVDRRHGKRPLPSD +EEK +++++ FP Y S RS QDM+AMVSAL ++I     NP
Sbjct: 31   EAYKVDRRHGKRPLPSDEAEEKEDQDHI-FPVY-SARSQQDMSAMVSALTQVIGNTDKNP 88

Query: 1101 SNAQGDVVPAPEPASR--EIDPSHLVQDQGXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQ 928
             +  G+  P    ++      PS L+QDQG                              
Sbjct: 89   LHDLGNPSPISHHSATTPHDQPSQLLQDQGNQLR-------------------------- 122

Query: 927  TRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALXXXXXXXXXXX 748
             RRHYRGVRQRPWGKWAAEIRDP KAARVWLGTFDT                        
Sbjct: 123  -RRHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAL------------------ 163

Query: 747  XXXXXXXXXXXXXXXAYDEAALRFKGTKAKLNFPERVQGRSELSYYLGRQD-TNTVVERV 571
                           AYDEAALRFKG KAKLNFPERVQGRSEL Y   RQD      +++
Sbjct: 164  ---------------AYDEAALRFKGNKAKLNFPERVQGRSELGYLTNRQDFLLPQQQQL 208

Query: 570  PDSVI---PQPPFSHDAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQ 442
            P+  +   P P     +YP L  YAQLL     D+ +   + Y  +
Sbjct: 209  PNPAVPPLPHPSLPRPSYPNLHHYAQLLPGGGGDLNHAMSSLYGRE 254


>ref|XP_002304640.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222842072|gb|EEE79619.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 234

 Score =  172 bits (436), Expect = 2e-40
 Identities = 107/249 (42%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
 Frame = -3

Query: 1158 MTAMVSALARIIDTGQDNPSNAQGDVVPAPEPASR-EIDPSHLVQDQGXXXXXXXXXXXX 982
            M+AMVSAL +++ T  +NP++ Q       +   + E D S  VQDQ             
Sbjct: 1    MSAMVSALTQVMGTTDNNPTSVQSTPYALDQSVVKDEPDQSQPVQDQE------------ 48

Query: 981  XXXXXXXXXXXXXXXGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXX 802
                               RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT      
Sbjct: 49   ----------------NTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAV 92

Query: 801  XXXXXALXXXXXXXXXXXXXXXXXXXXXXXXXXAYDEAALRFKGTKAKLNFPERVQGRSE 622
                                             AYD+AAL+FKGTKAKLNFPERVQGR+E
Sbjct: 93   ---------------------------------AYDKAALKFKGTKAKLNFPERVQGRTE 119

Query: 621  LSYYLGR-QDTNTVVERVPDSVIPQPP--------FSHDAYPGLLQYAQLLSSRDEDVQY 469
              YY+G    TN + E+ P  V P PP        F+ D YP LLQYAQ+LSS D +  Y
Sbjct: 120  FGYYMGSGTSTNVLTEQSPRPVAPPPPPPPPPPSSFAPDTYPDLLQYAQILSSNDANFPY 179

Query: 468  VTPNFYNNQ 442
             T N +N Q
Sbjct: 180  YTSNLFNQQ 188


>emb|CAN81030.1| hypothetical protein VITISV_011003 [Vitis vinifera]
          Length = 409

 Score =  161 bits (407), Expect = 4e-37
 Identities = 117/302 (38%), Positives = 142/302 (47%), Gaps = 25/302 (8%)
 Frame = -3

Query: 1272 KVDRRHGKRPLPSDASEEKAEENNLSFPSYPSLRSDQDMTAMVSALARIIDTGQ-DNPS- 1099
            KVD +HGKR +PS ASEEK E+    FP YP+ +S +D +AM+SA A   D G  DN   
Sbjct: 43   KVDHKHGKRSVPSGASEEKEEDP--IFPVYPAAQSQRDTSAMISAFADHQDIGSWDNRLA 100

Query: 1098 ---NAQGDVVPAPEPASREIDPSHLVQDQGXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQ 928
               + QG ++ A   + R+   S   QD+G                           G+ 
Sbjct: 101  HGYHGQGSLLAASVSSMRQHGLSQPPQDRGLNPGFLSLTLCFNQQILNYVNWPGRE-GSA 159

Query: 927  TRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALXXXXXXXXXXX 748
             +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT                        
Sbjct: 160  RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT------------------------ 195

Query: 747  XXXXXXXXXXXXXXXAYDEAALRFKGTKAKLNFPERVQGRSELSYYLGRQDTNTVVERV- 571
                           AYD AAL FKGTKAKLNFPERVQG S    +       +    V 
Sbjct: 196  ---------AEAAAAAYDAAALNFKGTKAKLNFPERVQGGSHSHSHSPSPSHYSRPITVP 246

Query: 570  -------------PDSVIPQPPFS-----HDAYPGLLQYAQLL-SSRDEDVQYVTPNFYN 448
                         P    P PPF+      + +P LLQYAQLL S+ D+D+   T   Y+
Sbjct: 247  PPSPPPPPPPPPPPQPYSPSPPFAPPFPVQEEFPNLLQYAQLLCSNTDDDLSNATSALYD 306

Query: 447  NQ 442
             Q
Sbjct: 307  QQ 308


>ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
            gi|223548630|gb|EEF50121.1| AP2 domain transcription
            factor RAP2.3, putative [Ricinus communis]
          Length = 249

 Score =  151 bits (382), Expect = 3e-34
 Identities = 100/255 (39%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
 Frame = -3

Query: 1158 MTAMVSALARIIDTGQDN--PSNAQGDVVPAPEP-ASREIDPSHLVQDQGXXXXXXXXXX 988
            M+AMVSAL+++I T  D+  P+  Q   +   +     E+D S   QDQ           
Sbjct: 1    MSAMVSALSQVIATSADDNKPTVVQSAPLAVEQSLVKEELDQSQPTQDQE---------- 50

Query: 987  XXXXXXXXXXXXXXXXXGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXX 808
                                 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT    
Sbjct: 51   ------------------NTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDA 92

Query: 807  XXXXXXXALXXXXXXXXXXXXXXXXXXXXXXXXXXAYDEAALRFKGTKAKLNFPERVQGR 628
                                               AYD+AAL+FKGTKAKLNFPERVQG+
Sbjct: 93   AL---------------------------------AYDKAALKFKGTKAKLNFPERVQGK 119

Query: 627  SELSYYLGRQDTNT----------VVERVPDSVIPQPP---FSHDAYPGLLQYAQLLSSR 487
             E SY++     ++          ++     S +P PP   F  + YP LLQYAQ+LSS 
Sbjct: 120  PEFSYFMTTSGDSSSSISPGQNPMLMAPPASSYLPPPPPPSFPQETYPDLLQYAQILSST 179

Query: 486  DEDVQYVTPNFYNNQ 442
            D    Y T N +N Q
Sbjct: 180  DASFPYYTSNLFNQQ 194


>ref|XP_002297877.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222845135|gb|EEE82682.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 231

 Score =  147 bits (370), Expect = 8e-33
 Identities = 98/245 (40%), Positives = 117/245 (47%), Gaps = 6/245 (2%)
 Frame = -3

Query: 1158 MTAMVSALARIIDTGQDNPSNAQGDVVPAPEPASR-EIDPSHLVQDQGXXXXXXXXXXXX 982
            M++MVSAL + + T  +N    Q       +   + E D S  VQDQ             
Sbjct: 1    MSSMVSALTQAMGTTDNNVPTVQSTPFALHQSVVKGEPDQSQPVQDQE------------ 48

Query: 981  XXXXXXXXXXXXXXXGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXX 802
                               RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT      
Sbjct: 49   ----------------NTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAV 92

Query: 801  XXXXXALXXXXXXXXXXXXXXXXXXXXXXXXXXAYDEAALRFKGTKAKLNFPERVQGRSE 622
                                             AYD+AAL+FKG+KAKLNFPERV    E
Sbjct: 93   ---------------------------------AYDKAALKFKGSKAKLNFPERVH---E 116

Query: 621  LSYYLGR-QDTNTVVERVPDSVIPQPP----FSHDAYPGLLQYAQLLSSRDEDVQYVTPN 457
              Y++     +N + E+ P  V P PP    F+ D YP LLQYAQ+LSS D +  Y T N
Sbjct: 117  FGYFMSSGASSNVMTEQNPRPVAPPPPPPSSFAPDTYPDLLQYAQILSSNDANFPYYTSN 176

Query: 456  FYNNQ 442
             +N Q
Sbjct: 177  LFNQQ 181


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