BLASTX nr result

ID: Coptis23_contig00013931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013931
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [S...   169   1e-39
ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [S...   165   1e-38
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...   165   2e-38
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...   162   9e-38
gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japo...   159   1e-36

>ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
            gi|241939151|gb|EES12296.1| hypothetical protein
            SORBIDRAFT_06g019043 [Sorghum bicolor]
          Length = 678

 Score =  169 bits (428), Expect = 1e-39
 Identities = 90/327 (27%), Positives = 164/327 (50%), Gaps = 3/327 (0%)
 Frame = +3

Query: 45   WYFTGAYASTKLTIRNLQWNVLMGLQPNTDEAWICMGDFNNVMSQDEKWGRCPATRTSIL 224
            W FTG Y   +   R+  W ++  L   +D  W+C GDFN ++  +E++G        + 
Sbjct: 356  WRFTGFYGEARKENRHRSWELMHFLSVQSDAPWLCAGDFNEILEANEQFGGVQRPERQMD 415

Query: 225  GFENMVQQCNLMDMGFVGGRYTWCNNQEGTSRVFTRIDRALCNAPWRIRFPEAKIFHIPT 404
            GF + +  C   D+GF G  YTW N QEG   +  R+DRA  NA +   F + K+ H  T
Sbjct: 416  GFRDALSACGFFDLGFSGLPYTWDNRQEGNHNIKVRLDRAFANATFADLFRQIKVNHEQT 475

Query: 405  IDSDHKFLGL---RFKPYYQKLKRPF*FEGMWLPDPTCQDVVQHAMNQLFNGSPSYTFCQ 575
             +SDH  L +   R K    +  + F +E MW  +P+   +V+       +         
Sbjct: 476  TESDHCCLVIECNRSKRGRGRRGKNFKYENMWRREPSYLQLVKDTWGDANHIEDLDELQT 535

Query: 576  KLAYCRQLLIHWNHTHFGHIGTKLKQIDEQLNQLQQNFAMVARPSEQDLREEKDLLMEYN 755
             L   R     W+H+ FG +  +L ++  +L ++++++++ + PS    R E+ ++   +
Sbjct: 536  SLGRMRWAFQEWDHSVFGSVRKELSKLRREL-EIERSYSIFSGPS----RRERQIMTRIS 590

Query: 756  QILKRQEIHWAQKAHFDWRKMGELNTKFFHAXXXXXXHRTSINSLKKPDGAIVTAREDIG 935
            ++L R+EI   Q++   W K G+ NTKFF A          I++L+  +G +VT + ++ 
Sbjct: 591  ELLAREEIMEKQRSRLSWLKDGDRNTKFFQAKAKERAKTNHISALRTVNGDLVTGQSELE 650

Query: 936  EQLVDFFGNLMSTSTPEMPEDLMQVIP 1016
               +DF+G+L +     +P++++  +P
Sbjct: 651  SMAIDFYGDLFTAQPILLPDEILAHVP 677


>ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
            gi|241942053|gb|EES15198.1| hypothetical protein
            SORBIDRAFT_07g024435 [Sorghum bicolor]
          Length = 785

 Score =  165 bits (418), Expect = 1e-38
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 19/344 (5%)
 Frame = +3

Query: 33   ESPIWYFTGAYASTKLTIRNLQWNVLMGLQPNTDEAWICMGDFNNVMSQDEKWGRCPATR 212
            ++P+W FTG Y   +  +R   W+ L  L   ++  W+C GDFN V+   E++G      
Sbjct: 449  QAPMWRFTGFYGEPRRELRGKSWDCLKFLNTQSELPWLCAGDFNEVLEAHEQFGG----- 503

Query: 213  TSILGFENMVQQCNLMDMGFVGGRYTWCNNQEGTSRVFTRIDRALCNAPWRIRFPEAKIF 392
                     VQ C LMD+GF+G  YTW N QEG++ V  R+DR L N  +   F + K++
Sbjct: 504  -------EAVQVCGLMDLGFIGLPYTWDNRQEGSNNVKVRLDRGLANPAFLDLFRDTKVW 556

Query: 393  HIPTIDSDHKFLGL---RFKPYYQKLKRPF*FEGMWLPDPTCQDVVQHAMNQLFNGSPSY 563
            H+ T +SDH  L L   R KP  ++ +R F +E MW  DP+    V+ A  +  + +   
Sbjct: 557  HVQTTESDHCCLLLECFRAKPSGRRARRRFRYENMWRRDPSYTLAVESAWQEPDDQASMS 616

Query: 564  TFCQKLAYCRQLLIHWNHTHFGHIGTKLKQIDEQLNQLQQNFAMVARPSEQDLREEKDLL 743
                +L    + +  W+ T FG +   L ++ + L +++   ++   PS    R+++ ++
Sbjct: 617  QVANRLGELDRSISDWDQTTFGSVRKNLAKLRKDLERIRGQ-SLGTGPS----RDKRRVM 671

Query: 744  MEYNQILKRQEIHWAQKAHFDWRKMGELNTKFFHAXXXXXXHRTSINSLKKPDGAIVTAR 923
             + +++L R+E    Q++  +W + G+ NT FF A          IN+L   DG  V+ +
Sbjct: 672  KQISEMLSREEEMEKQRSRVEWLREGDRNTAFFQAKSRERAKGNQINALLHADGVRVSEQ 731

Query: 924  EDIGEQLVDFFGNLMSTS----------------TPEMPEDLMQ 1007
             DI E    F+  L +                  TP+M E+LM+
Sbjct: 732  ADIEEMARQFYTELFTAQALLETDTILNCVPRKVTPQMNEELMK 775


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score =  165 bits (417), Expect = 2e-38
 Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 2/338 (0%)
 Frame = +3

Query: 9    IHACVNDKESPIWYFTGAYASTKLTIRNLQWNVLMGLQPNTDEAWICMGDFNNVMSQDEK 188
            I   +++  +  W  T  Y   ++  R   W++L  ++PN+   W+C+GDFN V+ + E 
Sbjct: 352  IDVIISEGSADPWRLTCVYGEAQIVERYKTWDMLKSIKPNSSLPWVCIGDFNEVLHRSEH 411

Query: 189  WGRCPATRTSILGFENMVQQCNLMDMGFVGGRYTWCNNQEGTSRVFTRIDRALCNAPWRI 368
             G    +   I GF  MV  C L D+G+ G  +T+     G S    R+DRAL    W  
Sbjct: 412  LGVQERSYAQIAGFREMVDVCGLCDLGYEGRSWTYEKKVTGGSFCRVRLDRALATPEWSA 471

Query: 369  RFPEAKIFHIPTIDSDHKFLGLRFKPYY--QKLKRPF*FEGMWLPDPTCQDVVQHAMNQL 542
            RFP AK+ HI    SDH  + L+++     Q+ +R F +E MW       +V+     + 
Sbjct: 472  RFPLAKVRHITAAASDHGPIVLQWEAAQGRQRQRRQFRYETMWETHEDFANVISQTWQRG 531

Query: 543  FNGSPSYTFCQKLAYCRQLLIHWNHTHFGHIGTKLKQIDEQLNQLQQNFAMVARPSEQDL 722
               + ++    KL      L HW    FG +  +LK +  +L  +Q +      PS  +L
Sbjct: 532  TKATTAHELQSKLRSVSCKLNHWEVRTFGQVSRELKGLRRELEMMQADVNRQG-PSHVEL 590

Query: 723  REEKDLLMEYNQILKRQEIHWAQKAHFDWRKMGELNTKFFHAXXXXXXHRTSINSLKKPD 902
            +  K+ +ME N    R+E+ W Q+A   W   G+ NT FFH        R  I  LK  +
Sbjct: 591  K-IKERIMELNH---REELMWKQRARIQWLSAGDKNTHFFHLRASRRRKRNMIVKLKTAN 646

Query: 903  GAIVTAREDIGEQLVDFFGNLMSTSTPEMPEDLMQVIP 1016
            G +   R+++G+    F+  L +    E  E +++ +P
Sbjct: 647  GQVTEDRKEMGQMATSFYKLLYTAEGTENMEAVLETVP 684


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
            gi|241916322|gb|EER89466.1| hypothetical protein
            SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score =  162 bits (411), Expect = 9e-38
 Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 3/289 (1%)
 Frame = +3

Query: 33   ESPIWYFTGAYASTKLTIRNLQWNVLMGLQPNTDEAWICMGDFNNVMSQDEKWGRCPATR 212
            ++P+W FTG Y   +  +R   W+ L  L   ++  W+C GDFN V+   E++G    + 
Sbjct: 362  QAPMWRFTGFYGEPRRELRGRSWDCLKFLNTQSELPWLCTGDFNEVLEAHEQFGGQSRSE 421

Query: 213  TSILGFENMVQQCNLMDMGFVGGRYTWCNNQEGTSRVFTRIDRALCNAPWRIRFPEAKIF 392
              + GF   VQ C LMD+GF+G  YTW N QEG + V  R+DR L N  +   F + K++
Sbjct: 422  RQMDGFREAVQVCGLMDLGFIGLPYTWDNRQEGINNVKVRLDRGLANPAFLDLFRDTKVW 481

Query: 393  HIPTIDSDHKFLGL---RFKPYYQKLKRPF*FEGMWLPDPTCQDVVQHAMNQLFNGSPSY 563
            H+ T +SDH  L L   R KP  ++ +R F +E MW  DP+    V+ A  +  + +   
Sbjct: 482  HVQTTESDHCCLLLECFRAKPSGRRARRRFRYENMWRRDPSYTLAVESAWQEPDDQASMS 541

Query: 564  TFCQKLAYCRQLLIHWNHTHFGHIGTKLKQIDEQLNQLQQNFAMVARPSEQDLREEKDLL 743
                +L    + L  W+ T FG +   L ++ + L +++   ++   PS    R+E+ ++
Sbjct: 542  QVANRLGELGRSLSDWDQTTFGSVRKNLAKLRKDLERIRGR-SLGTGPS----RDERRVM 596

Query: 744  MEYNQILKRQEIHWAQKAHFDWRKMGELNTKFFHAXXXXXXHRTSINSL 890
             + +++L R+E    Q++  +W + G+ NT FF A          IN+L
Sbjct: 597  KQISEMLSREEEMEKQRSRVEWLREGDRNTAFFQAKSRERAKCNQINAL 645


>gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japonica Group]
          Length = 763

 Score =  159 bits (401), Expect = 1e-36
 Identities = 94/339 (27%), Positives = 160/339 (47%), Gaps = 5/339 (1%)
 Frame = +3

Query: 9    IHACVNDKESPIWYFTGAYASTKLTIRNLQWNVLMGLQPNTDEAWICMGDFNNVMSQDEK 188
            I   + + +   W  T  Y   +   R   W +L  ++ N    W+ +GDFN  M Q E 
Sbjct: 383  IDVLITESDGERWRGTFVYGEPRSQDRLKMWTLLRRIKSNAALPWLMIGDFNEAMWQSEH 442

Query: 189  WGRCPATRTSILGFENMVQQCNLMDMGFVGGRYTWCNNQEGTSRVFTRIDRALCNAPWRI 368
            W R   +   +  F   +  C+L D+GF G  +T+ NNQ G + V  R+DRA+ +  W  
Sbjct: 443  WSRVRRSERQMKDFREALADCDLHDLGFHGVPWTYDNNQRGANNVRVRLDRAVASPAWLG 502

Query: 369  RFPEAKIFHIPTIDSDHKFLGL-----RFKPYYQKLKRPF*FEGMWLPDPTCQDVVQHAM 533
            RF +A I H+ T  SDH  L L            K+ R   +E +W  + +   VVQ A 
Sbjct: 503  RFRQASITHLVTPSSDHVPLLLERLEEELVHNSVKISR---YEAIWEREESFDSVVQQAW 559

Query: 534  NQLFNGSPSYTFCQKLAYCRQLLIHWNHTHFGHIGTKLKQIDEQLNQLQQNFAMVARPSE 713
             +         F  K+AY    L+ W+ +  G+I   ++   ++L +L+    + + P  
Sbjct: 560  GEGEVVRNLGDFKTKMAYTMDELVKWSKSKIGNIKKGIESRRKKLGELRMAGMLDSEPEV 619

Query: 714  QDLREEKDLLMEYNQILKRQEIHWAQKAHFDWRKMGELNTKFFHAXXXXXXHRTSINSLK 893
            + ++E      +  ++L+R+EI W Q++   W K G+ NTK+FH        +  +  L+
Sbjct: 620  KKIKE------QLQEMLRREEIWWRQRSQITWLKEGDKNTKYFHLKASWRARKNKVKKLR 673

Query: 894  KPDGAIVTAREDIGEQLVDFFGNLMSTSTPEMPEDLMQV 1010
            +P+G++V+  +++GE   DFF NL        P +L  +
Sbjct: 674  RPNGSLVSNEKEMGEVARDFFQNLYMKDENLDPTELFNL 712


Top