BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013911
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podo...    65   6e-09
gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitoc...    65   8e-09
gb|ACH42356.1| succinate dehydrogenase subunit 3, partial (mitoc...    63   2e-08
gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Goss...    62   6e-08
ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vin...    60   1e-07

>gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podophyllum peltatum]
          Length = 95

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   ILQRISAVFLTTLVLFSYMLYLKIGVICFTYQIFYQFLFYS 123
           I  RIS  FL T+VLF Y+LYLK+G ICFTY+ FYQFLFYS
Sbjct: 12  IFHRISGAFLATIVLFCYLLYLKMGFICFTYENFYQFLFYS 52


>gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
           [Nymphaea tetragona]
          Length = 79

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   ILQRISAVFLTTLVLFSYMLYLKIGVICFTYQIFYQFLFYS 123
           I  RIS  FL T+VLFSY+L LKIG+ICFTY+ FYQFLFYS
Sbjct: 19  ISHRISGAFLVTIVLFSYLLCLKIGLICFTYENFYQFLFYS 59


>gb|ACH42356.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
           [Eschscholzia californica]
          Length = 76

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   ILQRISAVFLTTLVLFSYMLYLKIGVICFTYQIFYQFLFYS 123
           I  RIS  FL T+VLFSY+L LKIG+ICFTY+ FYQ LFYS
Sbjct: 13  IFHRISGAFLATIVLFSYLLCLKIGLICFTYENFYQLLFYS 53


>gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum]
          Length = 201

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +1

Query: 1   ILQRISAVFLTTLVLFSYMLYLKIGVICFTYQIFYQFLFYS 123
           I  RIS VFLTT +LFSY+L LK+G ICFTY  FYQF FYS
Sbjct: 126 ITNRISGVFLTTALLFSYLLSLKMGSICFTYSNFYQFFFYS 166


>ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
           gi|209954150|emb|CAQ77586.1| succinate dehydrogenase
           subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1|
           succinate dehydrogenase subunit 3 [Vitis vinifera]
          Length = 168

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +1

Query: 1   ILQRISAVFLTTLVLFSYMLYLKIGVICFTYQIFYQFLFYS 123
           I  RIS  FL TLVLF Y+L LKIG+ICFTY+ FYQF F+S
Sbjct: 85  IYHRISGAFLATLVLFFYLLCLKIGLICFTYENFYQFFFFS 125