BLASTX nr result

ID: Coptis23_contig00013903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013903
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   186   4e-45
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_002513460.1| conserved hypothetical protein [Ricinus comm...   169   7e-40
ref|XP_002515544.1| conserved hypothetical protein [Ricinus comm...   163   3e-38
ref|XP_002513461.1| conserved hypothetical protein [Ricinus comm...   161   1e-37

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  186 bits (472), Expect = 4e-45
 Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 2/227 (0%)
 Frame = +3

Query: 33  YLLIMGQPDHFIRSSCDDIKHLLDILRVYFVPSTTRIPTKETAKVRRIPSATTLHESGVK 212
           +   +G  +  IR S  D+KHLLD+LR++FVP ++   T ++ K   I S T LHE+GVK
Sbjct: 210 FFKFLGLQEVLIRDSQPDVKHLLDLLRLWFVPPSSTKSTSKS-KFELIRSVTELHEAGVK 268

Query: 213 FNMGTTNCFLDITFTKGVINIPTMKVDDGTELVFRNLIAMEQS-QEDTTTFIGDYFYLLD 389
           F MGT +C ++I F  GV+ IP + ++D T+ +  NLIA EQ     T  +I DY  L++
Sbjct: 269 FRMGTVSCLMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQCCNRFTPHYITDYVILME 328

Query: 390 SLVNTANDVAFLQSNGIIENYLGSNEEVAQMINNIENGVIATKSHY-YGALMQDLNDYYS 566
            L+N+  DVA L   GII N LG NE V+ +   +   V+     + +  L +D+N Y+ 
Sbjct: 329 YLINSPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHK 388

Query: 567 RPCHQWMAKLRRDYFNNPWTIISLCAAFFLLVCTLIQTVCSVISVRR 707
              H W A LRRDYFNNPW IIS   A  LL  TLIQTVCS++S+++
Sbjct: 389 TRWHIWRATLRRDYFNNPWAIISFIGAVLLLFFTLIQTVCSLLSLKK 435


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  169 bits (429), Expect = 4e-40
 Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 1/206 (0%)
 Frame = +3

Query: 87  IKHLLDILRVYFVPSTTRIPTKETAKVRRIPSATTLHESGVKFNMGTTNCFLDITFTKGV 266
           ++HL+D L +   P  ++  +K+  K   IPSAT LH++GVKF +G++    DI F  G+
Sbjct: 208 VQHLVDFLWICHQPPQSK--SKKKLKTLGIPSATELHQAGVKFKLGSSKNLFDIKFKNGI 265

Query: 267 INIPTMKVDDGTELVFRNLIAMEQSQEDTTTFIGDYFYLLDSLVNTANDVAFLQSNGIIE 446
           + IP +++   TEL+FRNL+A EQ    +  +I DY  +++ LVNTA DV  L  +GI+E
Sbjct: 266 LEIPRLEIVGATELLFRNLLAFEQCH-CSKNYINDYVIIINHLVNTAKDVELLVKDGIVE 324

Query: 447 NYLGSNEEVAQMINNIENGVIATKSHYY-GALMQDLNDYYSRPCHQWMAKLRRDYFNNPW 623
           N+L  +E ++ + + +         H+Y   L+++LN Y  +P H+W A L++ YFNNPW
Sbjct: 325 NWLWDDEGMSALFHGLVKETFVIVDHFYFSGLVEELNAYCRKPWHKWQATLKQHYFNNPW 384

Query: 624 TIISLCAAFFLLVCTLIQTVCSVISV 701
           +IIS  AA  LLV T IQ VCS++SV
Sbjct: 385 SIISFIAAVILLVLTTIQAVCSILSV 410


>ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis]
           gi|223547368|gb|EEF48863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score =  169 bits (427), Expect = 7e-40
 Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
 Frame = +3

Query: 87  IKHLLDILRVYFVPSTTRIPTKETAKVRRIPSATTLHESGVKFNMGTTNCFLDITFTKGV 266
           I+H++D LRV   P   ++  ++  K   IPS T LH++GVKF +G++   L+I F +G+
Sbjct: 205 IEHMVDFLRVCQQPP--KLQNRKKLKKLIIPSVTELHQAGVKFELGSSRKLLNIKFNRGI 262

Query: 267 INIPTMKVDDGTELVFRNLIAMEQSQEDTTTFIGDYFYLLDSLVNTANDVAFLQSNGIIE 446
           + +P++++DD TE++ RNL A EQ   D   ++ DY  L+  LV    DV  L  NGIIE
Sbjct: 263 LKVPSLQIDDNTEILLRNLQAFEQCLCDRGNYVSDYISLVSLLVKAPKDVDLLAQNGIIE 322

Query: 447 NYLGSNEEVAQMINNIE-NGVIATKSHYYGALMQDLNDYYSRPCHQWMAKLRRDYFNNPW 623
           N+L ++E V+ +   +E   ++     Y+ +L+++LN Y   P ++W A L++DYFN PW
Sbjct: 323 NWLVNSEGVSTLFQKLEQENLLIPDDFYFSSLVEELNSYCKNPWNKWKATLKQDYFNTPW 382

Query: 624 TIISLCAAFFLLVCTLIQTVCSVISV 701
            +IS+ AA  LL+ T+IQ+VCS++ V
Sbjct: 383 AVISVIAAAILLILTVIQSVCSILQV 408


>ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis]
           gi|223545488|gb|EEF46993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 439

 Score =  163 bits (413), Expect = 3e-38
 Identities = 93/233 (39%), Positives = 133/233 (57%), Gaps = 2/233 (0%)
 Frame = +3

Query: 9   QITLHRLNYLLIMGQPDHFIRSSCDDIKHLLDILRVYFVPSTTRIPTKETAKVRRIPSAT 188
           ++T    N  + +G+  H +R S  ++ H +D LR+   P   R   +E  K     S+T
Sbjct: 205 ELTRVYFNSYMQLGRASHPMRRS--EVNHFVDFLRLCHQPIKPRQTPRENRKFEMTRSST 262

Query: 189 TLHESGVKFNMGTTNCFLDITFTKGVINIPTMKVDDGTELVFRNLIAMEQSQEDTTTFIG 368
            L E+GVKF + +T   LDI F  GV+ IP ++V + TE  FRNLIA EQ     T++I 
Sbjct: 263 ELREAGVKFKVASTTHLLDIQFNDGVLEIPYIRVSEITEAFFRNLIAFEQC-HCHTSYIS 321

Query: 369 DYFYLLDSLVNTANDVAFLQSNGIIENYLGSNEEVAQMINNIENGVIATKSH--YYGALM 542
           DY  ++DSL+NT +DV  L   GI++  L +N E + + NN+   ++   SH  YY  L 
Sbjct: 322 DYIVIMDSLINTPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEIL-YDSHVFYYSLLC 380

Query: 543 QDLNDYYSRPCHQWMAKLRRDYFNNPWTIISLCAAFFLLVCTLIQTVCSVISV 701
           +DLN +     H+W A L+ +YFN PWT IS+ A   LLV T IQ VCS+I V
Sbjct: 381 EDLNTFCKVRWHRWKATLKHNYFNTPWTAISVIAGVILLVLTFIQAVCSIIQV 433


>ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis]
           gi|223547369|gb|EEF48864.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score =  161 bits (407), Expect = 1e-37
 Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
 Frame = +3

Query: 60  HFIRSSCDDIKHLLDILRVYFVPSTTRIPTKETAKVR----RIPSATTLHESGVKFNMGT 227
           H++      ++HL+D + + F+      P+K  AK +      P+ + LH +G KF   T
Sbjct: 222 HYLVHGNIAVQHLVDFVAICFLQ-----PSKPNAKRKCRSLTTPTISKLHRAGAKFKSST 276

Query: 228 TNCFLDITFTK--GVINIPTMKVDDGTELVFRNLIAMEQSQEDTTTFIGDYFYLLDSLVN 401
           + C LDI F K  GV+ IP  KV D TE+  RN+ A EQ   +   +  DYF ++D LV+
Sbjct: 277 SRCLLDIKFDKKRGVLEIPQFKVTDYTEIFSRNIQAFEQCH-NRVNYANDYFSIMDLLVD 335

Query: 402 TANDVAFLQSNGIIENYLGSNEEVAQMINNIENGVIATKSHYYGALMQDLNDYYSRPCHQ 581
              DV  L  +GIIEN+L  N+  A   NN+    +     Y+  L+ DLN Y   P H 
Sbjct: 336 VPEDVDLLVQSGIIENWLEDNQAAATFFNNMGKHNLIYDDFYFSGLVGDLNAYCRTPWHN 395

Query: 582 WMAKLRRDYFNNPWTIISLCAAFFLLVCTLIQTVCSVISV 701
           W A L++ YFNNPWT+IS+ AA FLL+ T+IQTVCS++ V
Sbjct: 396 WKASLKQKYFNNPWTMISVAAAGFLLLLTIIQTVCSILQV 435


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