BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013900
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   577   e-162
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   554   e-155
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   538   e-150
gb|ABR16597.1| unknown [Picea sitchensis]                             538   e-150
ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group] g...   502   e-140

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  577 bits (1488), Expect = e-162
 Identities = 287/372 (77%), Positives = 320/372 (86%), Gaps = 4/372 (1%)
 Frame = +3

Query: 27   MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAK 206
            MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAK
Sbjct: 1    MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 207  DLKLHAKQLRRTLRFFEEEKLVTRDHRKETAKGAKIFSAAVAATADGLM-KEGEDKLKLH 383
            DLKLH+KQLRRTLRFFEEEKLVTRDHR+ETAKGAKI+SAA+AAT DG   KEG++K+KLH
Sbjct: 61   DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQTKEGDEKIKLH 120

Query: 384  THSYCCLDYAQIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISP 563
            THSYCCLDYAQIYDVVRYR+HRMKKKLKDELE++NTVQEYICPNC +RY ALDALRLIS 
Sbjct: 121  THSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISM 180

Query: 564  NDEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLA 743
             DEYFHCE+C+  LVA SDKLA+ EIGDGDDNAR RR EKLKD+LQKM+VQLKPLM+QL+
Sbjct: 181  EDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLS 240

Query: 744  RIKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSQGQGYGGTPMPYLGETKVEV 920
            R+KDLP PEFGSLQAWE          NGDS+ ND SKSSQG G+GGTPMP++GETKVEV
Sbjct: 241  RVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEV 300

Query: 921  ALS--GVKEEDVKPDTGTTSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSD 1094
            A S  GVKEED K +    S KVLPPWMIK+GM LT EQRGE+KQESKM SSS P+  SD
Sbjct: 301  AFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSD 360

Query: 1095 DKKPNNHEKDDK 1130
            DKK   ++ ++K
Sbjct: 361  DKKSTTNKDEEK 372


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  554 bits (1427), Expect = e-155
 Identities = 284/371 (76%), Positives = 313/371 (84%), Gaps = 3/371 (0%)
 Frame = +3

Query: 27   MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAK 206
            MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAK
Sbjct: 1    MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 207  DLKLHAKQLRRTLRFFEEEKLVTRDHRKETAKGAKIFSAAVAATADG-LMKEGEDKLKLH 383
            +LKLH+KQLRRTLRFFEEEKLVTRDHRKETAK AK+ +AAVA T DG   KEG+DK+K+H
Sbjct: 61   ELKLHSKQLRRTLRFFEEEKLVTRDHRKETAKAAKMHNAAVANTTDGHRTKEGDDKIKMH 120

Query: 384  THSYCCLDYAQIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISP 563
            THSYCCLDYAQIYDVVRYR+HRM+KKLKDELE++NTVQEY CPNC RRY ALDALRL+S 
Sbjct: 121  THSYCCLDYAQIYDVVRYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSL 180

Query: 564  NDEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLA 743
             DEYFHCENCD  LVA SDKLAA E GDGDDNAR RR EKLKD+LQKM+VQLKPLM QL+
Sbjct: 181  VDEYFHCENCDGELVAESDKLAAQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQLS 240

Query: 744  RIKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSQGQGYGGTPMPYLGETKVEV 920
            R+KDLP PEFGSLQ W+          NGDSS NDPS+SS  QGYGGTPMP+LGETKVEV
Sbjct: 241  RVKDLPVPEFGSLQEWQIHASAAGRAANGDSSYNDPSRSS--QGYGGTPMPFLGETKVEV 298

Query: 921  ALSGVK-EEDVKPDTGTTSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDD 1097
            + SGV+ +ED+K +T +T  KVLPPWMIKQGM LT EQRGEVKQ SKMD SS   +  DD
Sbjct: 299  SFSGVEGKEDLKSETASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDD 358

Query: 1098 KKPNNHEKDDK 1130
            KK  + E DDK
Sbjct: 359  KK-ISIENDDK 368


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  538 bits (1386), Expect = e-150
 Identities = 276/371 (74%), Positives = 308/371 (83%), Gaps = 5/371 (1%)
 Frame = +3

Query: 27   MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAK 206
            MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAK
Sbjct: 1    MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 207  DLKLHAKQLRRTLRFFEEEKLVTRDHRKETAKGAKIFSAAVAATADGL--MKEGEDKLKL 380
            +LKLH+KQLRRTLRF EEEKL+TRDHR+ETAKGAKIFSAAVAATADG    KEG++K+K+
Sbjct: 61   NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKM 120

Query: 381  HTHSYCCLDYAQIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLIS 560
            HTHSYC LDYAQ+YDVVRYRMHRMKKKLKDELE++NTVQEYICPNC+RRYTALDALRLIS
Sbjct: 121  HTHSYCSLDYAQVYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 561  PNDEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQL 740
              DEYFHCENC+  LVA SDKLAA +  DGDDN R RR EKLKD+LQKM+ QLKPL+EQL
Sbjct: 181  FEDEYFHCENCNGELVAESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQL 240

Query: 741  ARIKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSQGQGYGGTPMPYLGETKVE 917
            +R+KDLP PEFG+L AWE          NGD + NDPSKSS  QGYGGTPMP++GETKVE
Sbjct: 241  SRVKDLPVPEFGTLLAWEARASAAARGINGDLNGNDPSKSS--QGYGGTPMPFVGETKVE 298

Query: 918  VALSGVKEE--DVKPDTGTTSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRS 1091
            VA SG +    D K ++  TS KVLPPWMIK+GM LT EQRGEVK ESK D+ S     S
Sbjct: 299  VAFSGAEGTGVDAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFS 358

Query: 1092 DDKKPNNHEKD 1124
            DDKK   ++ D
Sbjct: 359  DDKKSLANDDD 369


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  538 bits (1386), Expect = e-150
 Identities = 270/370 (72%), Positives = 314/370 (84%), Gaps = 5/370 (1%)
 Frame = +3

Query: 27   MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAK 206
            MSAEPF RLV+LVARAFYDD T + + QPK+GRSDNRGMAVV+LDALTRRQWV+E+DLAK
Sbjct: 1    MSAEPFKRLVRLVARAFYDDTTTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAK 60

Query: 207  DLKLHAKQLRRTLRFFEEEKLVTRDHRKETAKGAKIFSAAVAATADGLM--KEGEDKLKL 380
            DLKLH+KQLRRTLRFFEEE+L+TRDHR+ETAKGAK+F+AA+AATADG    KEGE+KLKL
Sbjct: 61   DLKLHSKQLRRTLRFFEEERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKL 120

Query: 381  HTHSYCCLDYAQIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLIS 560
            HTHSYCCLDYAQ YDVVRYR+HRMKK+LKDELE+RNT+QEYICPNCNRRY+ALDAL+LIS
Sbjct: 121  HTHSYCCLDYAQTYDVVRYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLIS 180

Query: 561  PNDEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQL 740
              ++ FHCENC++ LVA SDKLAA+E GDG+DN R RR EKLK++L+KM+VQLKPLMEQL
Sbjct: 181  FTEDSFHCENCNSELVAESDKLAAEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQL 240

Query: 741  ARIKDLPAPEFGSLQAWE-XXXXXXXXXNGDSSTNDPSKSSQGQGYGGTPMPYLGETKVE 917
             R+KDLP PEFGSL  WE          +GD++ N+ SKSSQGQG+GGTPMP+LGETKVE
Sbjct: 241  TRVKDLPVPEFGSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVE 300

Query: 918  VALSG--VKEEDVKPDTGTTSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRS 1091
            VALSG  VK ED K D    S KVLPPWMI+QGM LTNEQRGEVKQE K D+ S  +  +
Sbjct: 301  VALSGMEVKAEDSKED--VASLKVLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPA 358

Query: 1092 DDKKPNNHEK 1121
             +KKP + EK
Sbjct: 359  VEKKPTDDEK 368


>ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group]
            gi|38637014|dbj|BAD03272.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623563|dbj|BAF23508.1| Os08g0343300
            [Oryza sativa Japonica Group] gi|125561187|gb|EAZ06635.1|
            hypothetical protein OsI_28884 [Oryza sativa Indica
            Group] gi|125603072|gb|EAZ42397.1| hypothetical protein
            OsJ_26976 [Oryza sativa Japonica Group]
            gi|215695399|dbj|BAG90590.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 462

 Score =  502 bits (1293), Expect = e-140
 Identities = 257/369 (69%), Positives = 293/369 (79%), Gaps = 4/369 (1%)
 Frame = +3

Query: 30   SAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKD 209
            S EPFNRLV+L ARAFYDDI+MKGD QPKT R DNRGMAVV+LDALTRRQWVREEDLAK 
Sbjct: 3    SMEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAKA 62

Query: 210  LKLHAKQLRRTLRFFEEEKLVTRDHRKETAKGAKIFSAAVAATADG--LMKEGEDKLKLH 383
            LKLH+KQLRR LRFFEEEKLVTRDHRKE+AKGAKI+SAA AA  DG  + KEGE+K+K+H
Sbjct: 63   LKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKMH 122

Query: 384  THSYCCLDYAQIYDVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISP 563
            THSYCCLDYAQI DVVRYR+HRMKKKLKDEL++RNT+Q YICPNC +RY+A DAL+LIS 
Sbjct: 123  THSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPNCKKRYSAFDALQLISY 182

Query: 564  NDEYFHCENCDTVLVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLA 743
             DEYFHCENC+  LVA SDKLA++E+GDGDDNAR RR EKLKD+ Q++D QLKPL  QL 
Sbjct: 183  TDEYFHCENCNGELVAESDKLASEEMGDGDDNARKRRREKLKDMQQRIDEQLKPLQAQLN 242

Query: 744  RIKDLPAPEFGSLQAWEXXXXXXXXXNGDSSTNDPSKSSQGQGYGGTPMPYLGETKVEVA 923
            R+KDLPAPEFGSLQ+WE           D S  D S++ QGQ   GTPMPYLGETKVEVA
Sbjct: 243  RVKDLPAPEFGSLQSWE-RANIGAFGTADPSAADSSRNPQGQ--YGTPMPYLGETKVEVA 299

Query: 924  LS--GVKEEDVKPDTGTTSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDD 1097
            LS  GVK+E  +  T     KVLPPWMIKQGM LT EQRGE    S +D  S   +  D+
Sbjct: 300  LSGTGVKDEGAESGTNGNGLKVLPPWMIKQGMNLTKEQRGETSNSSNLDEKS---EVKDE 356

Query: 1098 KKPNNHEKD 1124
            KK ++ E +
Sbjct: 357  KKQDSKEDE 365