BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013895
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    69   4e-10
gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica...    62   6e-08
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002321990.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indi...    62   6e-08

>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
           gi|222868939|gb|EEF06070.1| f-box family protein
           [Populus trichocarpa]
          Length = 360

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
 Frame = +2

Query: 155 DNEEHEGRTI----SVDRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLPTFN 322
           +NEE + R+     ++DR+S LPDS++HKILSLVD+  AV+TS+  +RWR LW SL   N
Sbjct: 2   ENEEDKARSSCRSENIDRLSDLPDSIIHKILSLVDLRCAVQTSVLSKRWRFLWTSLTDLN 61

Query: 323 FD 328
           F+
Sbjct: 62  FN 63


>gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica Group]
           gi|31429988|gb|AAP51965.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 949

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +2

Query: 176 RTISVDRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLPTFNFD 328
           R   +DRISGLPD +LH I+S ++   AV+T +  RRWRNLW ++P  N D
Sbjct: 85  RAARMDRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRTMPCINAD 135



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 42/75 (56%)
 Frame = +2

Query: 188 VDRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLPTFNFDSRIVNEGLETGRS 367
           +D IS LPD +LH+I+S ++   AV+T +  RRWRNLW ++P  N D +  +        
Sbjct: 548 MDWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTVPCINADCKEFDFFGFRRSE 607

Query: 368 AHFVQFVNEVFIQHD 412
             F +FVN +    D
Sbjct: 608 VEFKRFVNRLLELRD 622


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
 Frame = +2

Query: 191 DRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLP--TFNFD--SRIVNEGLET 358
           DRIS LP+ LLH+ILS VD    V+T +  +RW N+W S P   FNF+  S ++N     
Sbjct: 16  DRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYE 75

Query: 359 GRSAHFVQFVNEVFIQHD 412
               +F  F+N+V ++ +
Sbjct: 76  DEMVNFTDFINQVLVRRN 93


>ref|XP_002321990.1| f-box family protein [Populus trichocarpa]
           gi|222868986|gb|EEF06117.1| f-box family protein
           [Populus trichocarpa]
          Length = 356

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +2

Query: 191 DRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLPTFNFDSRIVNE 346
           DR+S LPD ++H+IL  +++  A++TS+   RW+NLWAS+P  NF+S+   E
Sbjct: 10  DRLSDLPDYIIHEILCFLEINQAIRTSVLSERWKNLWASVPDLNFNSKSFTE 61


>gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indica Group]
          Length = 492

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +2

Query: 176 RTISVDRISGLPDSLLHKILSLVDMEIAVKTSIFGRRWRNLWASLPTFNFD 328
           R   +DRISGLPD +LH I+S ++   AV+T +  RRWRNLW ++P  N D
Sbjct: 85  RAARMDRISGLPDKILHHIMSFLNARQAVQTCVLSRRWRNLWRTMPCINAD 135