BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013832
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 ...    85   5e-15
ref|XP_002514664.1| activating signal cointegrator 1 complex sub...    85   7e-15
ref|XP_002328672.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...    82   6e-14
ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...    82   6e-14

>ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
           [Vitis vinifera] gi|297733882|emb|CBI15129.3| unnamed
           protein product [Vitis vinifera]
          Length = 2093

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = -3

Query: 192 DQVVDSLKQG*QAMVFVHSCKDTGKIAKTLIEYARNMDELALFKDETHPQFALINKDVHK 13
           ++VVDSL+QG QAMVFVHS KDT K A+ LIE AR  D++ LFK+ETHPQF+L+  +V K
Sbjct: 669 NKVVDSLRQGHQAMVFVHSRKDTAKTAEKLIELARRNDDVELFKNETHPQFSLVKMEVMK 728

Query: 12  SRNK 1
           SRNK
Sbjct: 729 SRNK 732


>ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
           [Ricinus communis] gi|223546268|gb|EEF47770.1|
           activating signal cointegrator 1 complex subunit 3,
           helc1, putative [Ricinus communis]
          Length = 2100

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = -3

Query: 189 QVVDSLKQG*QAMVFVHSCKDTGKIAKTLIEYARNMDELALFKDETHPQFALINKDVHKS 10
           +VVDSL+QG Q MVFVHS KDT K A  L+E ARN D+L LFK++ HPQF+L+ K+V KS
Sbjct: 674 KVVDSLRQGHQVMVFVHSRKDTAKTADKLVELARNYDDLELFKNDAHPQFSLVKKEVVKS 733

Query: 9   RNK 1
           RNK
Sbjct: 734 RNK 736


>ref|XP_002328672.1| predicted protein [Populus trichocarpa] gi|222838848|gb|EEE77199.1|
           predicted protein [Populus trichocarpa]
          Length = 1544

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = -3

Query: 189 QVVDSLKQG*QAMVFVHSCKDTGKIAKTLIEYARNMDELALFKDETHPQFALINKDVHKS 10
           +VVDSLKQG QAMVFVHS KDT K A+ L+E ARN +++ LF+++ HPQFAL  K+V KS
Sbjct: 281 KVVDSLKQGHQAMVFVHSRKDTAKTAEKLVELARNNEDVELFRNDEHPQFALFKKEVMKS 340

Query: 9   RNK 1
           RNK
Sbjct: 341 RNK 343


>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332010042|gb|AED97425.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = -3

Query: 189 QVVDSLKQG*QAMVFVHSCKDTGKIAKTLIEYARNMDELALFKDETHPQFALINKDVHKS 10
           +VVDS+KQG QAM+FVHS KDT K A+ L++ AR  + L LF +ETHPQF L+ KDV KS
Sbjct: 737 KVVDSIKQGHQAMIFVHSRKDTSKTAEKLVDLARQYETLDLFTNETHPQFQLMKKDVMKS 796

Query: 9   RNK 1
           RNK
Sbjct: 797 RNK 799


>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
           thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = -3

Query: 189 QVVDSLKQG*QAMVFVHSCKDTGKIAKTLIEYARNMDELALFKDETHPQFALINKDVHKS 10
           +VVDS+KQG QAM+FVHS KDT K A+ L++ AR  + L LF +ETHPQF L+ KDV KS
Sbjct: 737 KVVDSIKQGHQAMIFVHSRKDTSKTAEKLVDLARQYETLDLFTNETHPQFQLMKKDVMKS 796

Query: 9   RNK 1
           RNK
Sbjct: 797 RNK 799