BLASTX nr result

ID: Coptis23_contig00013828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013828
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO42282.1| unknown protein [Arabidopsis thaliana]                 140   8e-32
ref|NP_181563.2| protein trichome birefringence-like 33 [Arabido...   140   8e-32
gb|AAD25667.1| hypothetical protein [Arabidopsis thaliana]            140   8e-32
ref|XP_002879865.1| hypothetical protein ARALYDRAFT_483086 [Arab...   134   6e-30
ref|XP_002520791.1| conserved hypothetical protein [Ricinus comm...   134   6e-30

>gb|AAO42282.1| unknown protein [Arabidopsis thaliana]
          Length = 425

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = +3

Query: 60  VLYTEDYTYVFKQHPSRFEPELENHKLDRPITRKEKNNVAFAVGETDKECDLFNGKWVRD 239
           VLY ED+  +F Q     EP         P   K+   +AFA+G+T++ CD+F+GKWVRD
Sbjct: 36  VLYGEDFMCIFGQ----LEPNFVLPPSRTPEKNKKSEKLAFAIGKTEESCDVFSGKWVRD 91

Query: 240 ELNRPIYDESECPYIQPQLTCQEHGRPEKDYQFFRWQPHSCNLPRFNAT 386
           E++RP+Y+E ECPYIQPQLTCQEHGRP+KDYQF+RWQP+ C+LP FNA+
Sbjct: 92  EVSRPLYEEWECPYIQPQLTCQEHGRPDKDYQFWRWQPNHCDLPSFNAS 140


>ref|NP_181563.2| protein trichome birefringence-like 33 [Arabidopsis thaliana]
           gi|330254720|gb|AEC09814.1| protein trichome
           birefringence-like 33 [Arabidopsis thaliana]
          Length = 425

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = +3

Query: 60  VLYTEDYTYVFKQHPSRFEPELENHKLDRPITRKEKNNVAFAVGETDKECDLFNGKWVRD 239
           VLY ED+  +F Q     EP         P   K+   +AFA+G+T++ CD+F+GKWVRD
Sbjct: 36  VLYGEDFMCIFGQ----LEPNFVLPPSRTPEKNKKSEKLAFAIGKTEESCDVFSGKWVRD 91

Query: 240 ELNRPIYDESECPYIQPQLTCQEHGRPEKDYQFFRWQPHSCNLPRFNAT 386
           E++RP+Y+E ECPYIQPQLTCQEHGRP+KDYQF+RWQP+ C+LP FNA+
Sbjct: 92  EVSRPLYEEWECPYIQPQLTCQEHGRPDKDYQFWRWQPNHCDLPSFNAS 140


>gb|AAD25667.1| hypothetical protein [Arabidopsis thaliana]
          Length = 435

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = +3

Query: 60  VLYTEDYTYVFKQHPSRFEPELENHKLDRPITRKEKNNVAFAVGETDKECDLFNGKWVRD 239
           VLY ED+  +F Q     EP         P   K+   +AFA+G+T++ CD+F+GKWVRD
Sbjct: 36  VLYGEDFMCIFGQ----LEPNFVLPPSRTPEKNKKSEKLAFAIGKTEESCDVFSGKWVRD 91

Query: 240 ELNRPIYDESECPYIQPQLTCQEHGRPEKDYQFFRWQPHSCNLPRFNAT 386
           E++RP+Y+E ECPYIQPQLTCQEHGRP+KDYQF+RWQP+ C+LP FNA+
Sbjct: 92  EVSRPLYEEWECPYIQPQLTCQEHGRPDKDYQFWRWQPNHCDLPSFNAS 140


>ref|XP_002879865.1| hypothetical protein ARALYDRAFT_483086 [Arabidopsis lyrata subsp.
           lyrata] gi|297325704|gb|EFH56124.1| hypothetical protein
           ARALYDRAFT_483086 [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
 Frame = +3

Query: 60  VLYTEDYTYVFKQHPSRF--EPELENHKLDRPITRKEKNNVAFAVGETDKECDLFNGKWV 233
           VLY ED+  +F Q    F   P     K       K+   +AF++G+T++ CD+F+GKWV
Sbjct: 36  VLYGEDFMCIFGQLEPNFVLPPSRTTEK------NKKSEKLAFSIGKTEESCDVFSGKWV 89

Query: 234 RDELNRPIYDESECPYIQPQLTCQEHGRPEKDYQFFRWQPHSCNLPRFNAT 386
           RDE++RP Y+E ECPYIQPQLTCQEHGRP+KDYQF+RWQP+ C+LP FNA+
Sbjct: 90  RDEVSRPPYEEWECPYIQPQLTCQEHGRPDKDYQFWRWQPNHCDLPSFNAS 140


>ref|XP_002520791.1| conserved hypothetical protein [Ricinus communis]
           gi|223539922|gb|EEF41500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = +3

Query: 60  VLYTEDYTYVFKQHPSRFEPELENHKLDRPITRKEKN--NVAFAVGETDKECDLFNGKWV 233
           +LY ED+  +  Q     +P+      DR +TR EK    + FA+G+T + CDLF+G+WV
Sbjct: 35  ILYGEDFMCLLGQ----LDPDS-----DRLLTRTEKKWEKLPFAIGKTPEGCDLFSGRWV 85

Query: 234 RDELNRPIYDESECPYIQPQLTCQEHGRPEKDYQFFRWQPHSCNLPRFNAT 386
           +DE  RP+Y+E ECPYIQPQLTCQEHGRP+KDYQ++RWQPH C+LP FNAT
Sbjct: 86  KDESTRPLYEEWECPYIQPQLTCQEHGRPDKDYQYWRWQPHGCDLPSFNAT 136


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