BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013821
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|35549...    63   2e-08
gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction doma...    63   2e-08
gb|ACI32850.1| S locus F-box protein 1 [Prunus spinosa]                61   8e-08
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...    61   1e-07
dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]                60   2e-07

>ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|355496570|gb|AES77773.1|
           F-box protein [Medicago truncatula]
          Length = 399

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
 Frame = +1

Query: 4   TGNNYKVPKVLDLPHHFDNALESPTIIASC--NGIICL--QPDLSENVSLWNPALKEFRI 171
           +G  +++   +D P+ F+    +  I  SC  NGI+CL    + +    LWNP  +EF++
Sbjct: 90  SGERFEIGTKIDWPNPFEENKPNFDISGSCSINGILCLINYSEPNTRAVLWNPTTQEFKV 149

Query: 172 LP-EPSELVPDSRLDFY-FGFGYDAITNDYKV 261
           +P  P E VP   +D    GFGYD +TNDYK+
Sbjct: 150 IPTSPFEFVPHMDVDILRHGFGYDCVTNDYKI 181


>gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction domain; Galactose
           oxidase, central [Medicago truncatula]
          Length = 401

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
 Frame = +1

Query: 4   TGNNYKVPKVLDLPHHFDNALESPTIIASC--NGIICL--QPDLSENVSLWNPALKEFRI 171
           +G  +++   +D P+ F+    +  I  SC  NGI+CL    + +    LWNP  +EF++
Sbjct: 92  SGERFEIGTKIDWPNPFEENKPNFDISGSCSINGILCLINYSEPNTRAVLWNPTTQEFKV 151

Query: 172 LP-EPSELVPDSRLDFY-FGFGYDAITNDYKV 261
           +P  P E VP   +D    GFGYD +TNDYK+
Sbjct: 152 IPTSPFEFVPHMDVDILRHGFGYDCVTNDYKI 183


>gb|ACI32850.1| S locus F-box protein 1 [Prunus spinosa]
          Length = 245

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = +1

Query: 64  LESPTIIASCNGIICLQPDLSENVSLWNPALKEFRILPEPSELVPDSRLDFYFGFGYDAI 243
           +ESP+I+  CNGI+CL P  S+N+ L NPA+KE ++LP+ S  +PD       GFGYD  
Sbjct: 8   VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSS--LPD-WWGCAVGFGYDPK 63

Query: 244 TNDYKV 261
           + DYKV
Sbjct: 64  SKDYKV 69


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
           communis] gi|223529397|gb|EEF31360.1| Transitional
           endoplasmic reticulum ATPase, putative [Ricinus
           communis]
          Length = 1029

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/93 (43%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
 Frame = +1

Query: 13  NYKVPKVLDLPHHFDNALE----------SPTIIASCNGIICLQPDLSENVSLWNPALKE 162
           N  VP  L L + F++ LE             I+ SCNG+IC+  DLS    L NP  KE
Sbjct: 687 NTVVPSSLGLNNDFEDDLEFFNSFPFYGPDVNIVGSCNGLICIALDLSTFFVL-NPGTKE 745

Query: 163 FRILPEPSELVPDSRLDFYFGFGYDAITNDYKV 261
            R LP+P    PD     Y+GFGYDA  +DYKV
Sbjct: 746 CRALPDPGSY-PDGVA--YYGFGYDASADDYKV 775


>dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]
          Length = 409

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = +1

Query: 64  LESPTIIASCNGIICLQPDLSENVSLWNPALKEFRILPEPSELVPDSRLDFYFGFGYDAI 243
           +ESP+I+  CNGI+CL P  S+N+ L NPA+KE ++LP+    +PD       GFGYD  
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSG--LPD-WWGCAVGFGYDPK 167

Query: 244 TNDYKV 261
           + DYKV
Sbjct: 168 SKDYKV 173