BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013801
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   206   4e-51
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   205   5e-51
ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   204   9e-51
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   197   2e-48
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....   193   2e-47

>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  206 bits (523), Expect = 4e-51
 Identities = 98/179 (54%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
 Frame = +1

Query: 121 IYPVLIDRRII--TRSNCTVSRLNHKDWLAPNEVLEIFKRLSDSESVINVLEKYSQRKDY 294
           I+P LI +     T     + RL+HKDWL+P EVL+IF  L + ESV+ VL+  S+RKD+
Sbjct: 22  IHPTLIQKSTFFSTFPPDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVSKRKDF 81

Query: 295 NPSVALYTVVVQKLSRGKKYDAIDDVLKKIKNEKTCMLSDDFFYGVIRIYGN-AGYINRA 471
            P+ ALYT+V+ KL++ + +DAI+DV+K +K +K C LSD FFY VI++YGN AG  +RA
Sbjct: 82  KPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRA 141

Query: 472 MEMLFSMREYNCWPTIRTFNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIK 648
           +E LF M +++CWP+++TFN VLN+LVSAK+FD++H+VY GAP LG+EID CCLNIL+K
Sbjct: 142 VETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVK 200


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  205 bits (522), Expect = 5e-51
 Identities = 98/179 (54%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
 Frame = +1

Query: 121 IYPVLIDRRII--TRSNCTVSRLNHKDWLAPNEVLEIFKRLSDSESVINVLEKYSQRKDY 294
           I+P LI + I   T     + RL+HKDWL+P EVL+IF  L + ESV+ VL+   +RKD+
Sbjct: 22  IHPTLIQKSIFFSTFPPDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVCKRKDF 81

Query: 295 NPSVALYTVVVQKLSRGKKYDAIDDVLKKIKNEKTCMLSDDFFYGVIRIYGN-AGYINRA 471
            P+ ALYT+V+ KL++ + +DAI+DV+K +K +K C LSD FFY VI++YGN AG  +RA
Sbjct: 82  KPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRA 141

Query: 472 MEMLFSMREYNCWPTIRTFNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIK 648
           +E LF M +++CWP+++TFN VLN+LVSAK+FD++H+VY GAP LG+EID CCLNIL+K
Sbjct: 142 VETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVK 200


>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  204 bits (520), Expect = 9e-51
 Identities = 95/159 (59%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
 Frame = +1

Query: 178 RLNHKDWLAPNEVLEIFKRLSDSESVINVLEKYSQRKDYNPSVALYTVVVQKLSRGKKYD 357
           +L HKDWL+PNEV++IF+ L D  S+I+V  +YS+RKDY P+ ALYT V+ KL++ K +D
Sbjct: 1   KLTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFD 60

Query: 358 AIDDVLKKIKNEKTCMLSDDFFYGVIRIYGN-AGYINRAMEMLFSM-REYNCWPTIRTFN 531
           AI+D+++KIK +K+C LS+DFF+ VI+IYG  AG I +AME LF M + YNCWP +++FN
Sbjct: 61  AIEDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFN 120

Query: 532 CVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIK 648
            VLN+LVSAK FD++H+VYL AP LG+EID C LNILIK
Sbjct: 121 LVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIK 159


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  197 bits (500), Expect = 2e-48
 Identities = 86/158 (54%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
 Frame = +1

Query: 178 RLNHKDWLAPNEVLEIFKRLSDSESVINVLEKYSQRKDYNPSVALYTVVVQKLSRGKKYD 357
           +L+H+DWL+PNEV+ I +++    SV+  L ++S RKDY P+  +YT+VV +L+ G+ +D
Sbjct: 49  KLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFD 108

Query: 358 AIDDVLKKIKNEKTCMLSDDFFYGVIRIYGN-AGYINRAMEMLFSMREYNCWPTIRTFNC 534
            I+ V+ +IK E+   LSD+FFY VI+IYGN AG +N+A++ LF M  YNCWP+++TFN 
Sbjct: 109 DIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNF 168

Query: 535 VLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIK 648
           VLN+LVSAK FD++H+VY+GAP+LG+EID CCLNIL+K
Sbjct: 169 VLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILVK 206


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  193 bits (491), Expect = 2e-47
 Identities = 86/160 (53%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
 Frame = +1

Query: 172 VSRLNHKDWLAPNEVLEIFKRLSDSESVINVLEKYSQRKDYNPSVALYTVVVQKLSRGKK 351
           ++RL HKDWLAPNEVL+IF+ + D   ++   + YS+RKDY P+ +LY +++ K  + K 
Sbjct: 51  LARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQAKM 110

Query: 352 YDAIDDVLKKIKNEKTCMLSDDFFYGVIRIYGN-AGYINRAMEMLFSMREYNCWPTIRTF 528
           +D I++V+  IK EK C  S+DFFY ++RIYGN AG INRA+E+LF M ++ CWP+ ++F
Sbjct: 111 FDEIEEVMSTIKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSAKSF 170

Query: 529 NCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIK 648
           N +LN+LVSAK FD IH++++ AP+LG+EID CCLNILIK
Sbjct: 171 NFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210