BLASTX nr result

ID: Coptis23_contig00013788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013788
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...    86   3e-15
emb|CBI39701.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...    85   5e-15
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...    84   2e-14
emb|CBI39703.3| unnamed protein product [Vitis vinifera]               80   1e-13

>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
 Frame = +1

Query: 40  LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHKPTYLSCVVLSLF 210
           LL P+F+  F               + CK+          ++R  Y+K T+  C  LSL 
Sbjct: 10  LLNPVFLRVFSASLHLVLLLLLFVSWVCKRIKGGAPENCKRTRFLYYKQTFACCQGLSLL 69

Query: 211 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFP 363
           +L+LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP
Sbjct: 70  NLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFP 124


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
 Frame = +1

Query: 40  LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHKPTYLSCVVLSLF 210
           LL P+F+  F               + CK+          ++R  Y+K T+  C  LSL 
Sbjct: 16  LLNPVFLRVFSASLHLVLLLLLFVSWVCKRIKGGAPENCKRTRFLYYKQTFACCQGLSLL 75

Query: 211 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFP 363
           +L+LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP
Sbjct: 76  NLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFP 130


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
 Frame = +1

Query: 40  LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNNETV---KSRPFYHKPTYLSCVVLSLF 210
           LL P+F+  F               + CK+ +        ++R  Y+K T+  C  LSL 
Sbjct: 10  LLNPVFLRAFSASLHLVLLLLLFVSWVCKRINGGALENYKRTRFLYYKQTFACCQGLSLL 69

Query: 211 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFP 363
           +  LC LNYFYWY NGWS E +V  LDLVLRT++W  +SV L+     S + KFP
Sbjct: 70  NFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVSVYLHTQFHGSVEPKFP 124


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
 Frame = +1

Query: 40  LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHKPTYLSCVVLSLF 210
           LL P+F+  F               + CK+ +        ++R  Y+K T+  C  LSL 
Sbjct: 10  LLNPVFLRAFSASLHLVLLLLLFVSWVCKRINGGALENCKRTRFLYYKQTFACCQGLSLL 69

Query: 211 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFP 363
           +  LC LNYFYWY NGWS E +V  LDLVLRT++W  + V L+     S + KFP
Sbjct: 70  NFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVCVYLHTQFHGSVEPKFP 124


>emb|CBI39703.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
 Frame = +1

Query: 40  LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN--ETVKS-RPFYHKPTYLSCVVLSLF 210
           LL PIF+  F               + CK+   +  E  KS R   +K T+     LSL 
Sbjct: 16  LLNPIFLRAFSASLHLVLLLLLFVSWVCKRIKGSALENCKSTRSLSYKQTFACSQGLSLL 75

Query: 211 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFP 363
           +  LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP
Sbjct: 76  NFFLCFLNYFYWYRNGWSDEKLVTLLDLVLRTLAWGAVCVYLHTQFHGSVEPKFP 130


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