BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013786
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31361.3| unnamed protein product [Vitis vinifera]              313   e-103
ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...   311   e-102
ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase s...   284   4e-94
ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [S...   283   4e-93
ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase s...   278   1e-92

>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  313 bits (801), Expect(2) = e-103
 Identities = 154/225 (68%), Positives = 175/225 (77%)
 Frame = -1

Query: 1144 LRPSGKLALGAIVGGSSVEERIRCAQEVARRHVSGYWIGGFGLGESAEKCSALLTAVTDV 965
            L P+G    GAIVGG++VEER RCAQEVA R+VSGYWIGGFGLGES ++  ALL AV D+
Sbjct: 176  LSPAGGAVFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADI 235

Query: 964  LPKEKPRQICXXXXXXXXXXXVASGVDLFDSTHIYHLTLGGFALVFPLNRDERHISNSQL 785
            LP E+PRQIC           VA+G+DLFDST+IYHLTLGGFAL FPL   +RH  +S+L
Sbjct: 236  LPVERPRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRL 295

Query: 784  SDTGGDCTKINLRATVYRKDKSPIADNCRCYTCQNHTRAYINHLLNVHEMLAQILLEIHN 605
            SD G D TKINLRAT+YRKD +PI DNC CYTCQNHTRAYINHLLNVHEMLAQILLEIHN
Sbjct: 296  SDVGSDHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHN 355

Query: 604  THHYLGFFRTIREAIKNGEFDHFCQKFIEGRREHLAAAACS*VQF 470
            THHYLGFFR+IR AIK   F+ F Q FI+ RREHL   A + + F
Sbjct: 356  THHYLGFFRSIRTAIKEDNFEQFRQTFIDSRREHLNMTALNLLDF 400



 Score = 89.0 bits (219), Expect(2) = e-103
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = -2

Query: 1293 IRPAEYMEMISSLKPNLWASLVDEVPAWVLEKRNKTSVD*TVRWLDECLALDP 1135
            I+P EYMEMISS+KP+LWA+L DEVPAWV  KRNK SVD T+RWLDEC+ L P
Sbjct: 126  IKPVEYMEMISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSP 178


>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
            vinifera]
          Length = 399

 Score =  311 bits (798), Expect(2) = e-102
 Identities = 153/219 (69%), Positives = 172/219 (78%)
 Frame = -1

Query: 1144 LRPSGKLALGAIVGGSSVEERIRCAQEVARRHVSGYWIGGFGLGESAEKCSALLTAVTDV 965
            L P+G    GAIVGG++VEER RCAQEVA R+VSGYWIGGFGLGES ++  ALL AV D+
Sbjct: 176  LSPAGGAVFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADI 235

Query: 964  LPKEKPRQICXXXXXXXXXXXVASGVDLFDSTHIYHLTLGGFALVFPLNRDERHISNSQL 785
            LP E+PRQIC           VA+G+DLFDST+IYHLTLGGFAL FPL   +RH  +S+L
Sbjct: 236  LPVERPRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRL 295

Query: 784  SDTGGDCTKINLRATVYRKDKSPIADNCRCYTCQNHTRAYINHLLNVHEMLAQILLEIHN 605
            SD G D TKINLRAT+YRKD +PI DNC CYTCQNHTRAYINHLLNVHEMLAQILLEIHN
Sbjct: 296  SDVGSDHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHN 355

Query: 604  THHYLGFFRTIREAIKNGEFDHFCQKFIEGRREHLAAAA 488
            THHYLGFFR+IR AIK   F+ F Q FI+ RREHL   A
Sbjct: 356  THHYLGFFRSIRTAIKEDNFEQFRQTFIDSRREHLNMTA 394



 Score = 89.0 bits (219), Expect(2) = e-102
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = -2

Query: 1293 IRPAEYMEMISSLKPNLWASLVDEVPAWVLEKRNKTSVD*TVRWLDECLALDP 1135
            I+P EYMEMISS+KP+LWA+L DEVPAWV  KRNK SVD T+RWLDEC+ L P
Sbjct: 126  IKPVEYMEMISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSP 178


>ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like
            [Brachypodium distachyon]
          Length = 396

 Score =  284 bits (727), Expect(2) = 4e-94
 Identities = 136/215 (63%), Positives = 167/215 (77%)
 Frame = -1

Query: 1135 SGKLALGAIVGGSSVEERIRCAQEVARRHVSGYWIGGFGLGESAEKCSALLTAVTDVLPK 956
            +G+  LG +VGGSS+EER RCA EV++R+VSG+WIGGFGLGE+ E+   LL AVTD LP 
Sbjct: 180  AGQNTLGVVVGGSSIEERKRCATEVSKRNVSGFWIGGFGLGENVEERCNLLNAVTDCLPS 239

Query: 955  EKPRQICXXXXXXXXXXXVASGVDLFDSTHIYHLTLGGFALVFPLNRDERHISNSQLSDT 776
            +KPR +            +ASG+DLFDST+I+ LT+GGFAL+FP++  ER + N   +D+
Sbjct: 240  DKPRLVSRLGLPEEVLEGIASGIDLFDSTYIHQLTMGGFALIFPVDMVEREMQNGIFNDS 299

Query: 775  GGDCTKINLRATVYRKDKSPIADNCRCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHH 596
             GD TKINLR T YRKD S I D+C C+TCQNHTRAY+NHLLNVHEMLAQILLEIHNTHH
Sbjct: 300  AGDLTKINLRTTTYRKDTSRIVDSCSCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHH 359

Query: 595  YLGFFRTIREAIKNGEFDHFCQKFIEGRREHLAAA 491
            YL FFR+IREAIK GEFD F ++F+E RR  +AAA
Sbjct: 360  YLHFFRSIREAIKIGEFDLFWKQFVENRRSQIAAA 394



 Score = 88.6 bits (218), Expect(2) = 4e-94
 Identities = 38/52 (73%), Positives = 47/52 (90%)
 Frame = -2

Query: 1293 IRPAEYMEMISSLKPNLWASLVDEVPAWVLEKRNKTSVD*TVRWLDECLALD 1138
            ++P++YME+IS ++PNLWASL DEVPAWV EKRNKTSV+ T+RWLD CLALD
Sbjct: 126  VKPSDYMELISCMRPNLWASLADEVPAWVNEKRNKTSVERTLRWLDACLALD 177


>ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [Sorghum bicolor]
            gi|241921214|gb|EER94358.1| hypothetical protein
            SORBIDRAFT_01g026340 [Sorghum bicolor]
          Length = 401

 Score =  283 bits (724), Expect(2) = 4e-93
 Identities = 139/216 (64%), Positives = 167/216 (77%)
 Frame = -1

Query: 1135 SGKLALGAIVGGSSVEERIRCAQEVARRHVSGYWIGGFGLGESAEKCSALLTAVTDVLPK 956
            SG  + G IVGGSS+E+R  CA EV++R+VSG+WI GFGLGES E+  +LL AVTD LP 
Sbjct: 185  SGTNSFGVIVGGSSLEQRKLCATEVSKRNVSGFWIAGFGLGESIEERCSLLNAVTDCLPP 244

Query: 955  EKPRQICXXXXXXXXXXXVASGVDLFDSTHIYHLTLGGFALVFPLNRDERHISNSQLSDT 776
            EKPR +            VA+G+DLFDST+IY LT+GGFAL+FP++  ER + N  L+ +
Sbjct: 245  EKPRLVSRLGLPEEVLEGVAAGIDLFDSTYIYQLTMGGFALIFPVDMVEREMQNGILNTS 304

Query: 775  GGDCTKINLRATVYRKDKSPIADNCRCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHH 596
            GGD TKINLRAT YRKD S + D+C C+TCQNHTRAY+NHLLNVHEMLAQILLEIHNTHH
Sbjct: 305  GGDSTKINLRATTYRKDMSRLVDSCNCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHH 364

Query: 595  YLGFFRTIREAIKNGEFDHFCQKFIEGRREHLAAAA 488
            YL FFR+IREAIK GEFD F Q+F++ RR H AA A
Sbjct: 365  YLRFFRSIREAIKVGEFDLFRQEFVKKRRAHFAALA 400



 Score = 86.3 bits (212), Expect(2) = 4e-93
 Identities = 36/52 (69%), Positives = 46/52 (88%)
 Frame = -2

Query: 1293 IRPAEYMEMISSLKPNLWASLVDEVPAWVLEKRNKTSVD*TVRWLDECLALD 1138
            ++P++YME+IS +KPN+WASL DEVPAWV EKRNK SV+ T+RWLD C+ALD
Sbjct: 131  VKPSDYMELISCMKPNIWASLADEVPAWVNEKRNKVSVERTLRWLDACIALD 182


>ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like
            [Cucumis sativus] gi|449490166|ref|XP_004158527.1|
            PREDICTED: queuine tRNA-ribosyltransferase subunit
            qtrtd1-like [Cucumis sativus]
          Length = 399

 Score =  278 bits (710), Expect(2) = 1e-92
 Identities = 137/215 (63%), Positives = 160/215 (74%)
 Frame = -1

Query: 1144 LRPSGKLALGAIVGGSSVEERIRCAQEVARRHVSGYWIGGFGLGESAEKCSALLTAVTDV 965
            L  +G    GAIVGG+ +EER RCA EV +R+VSGYWIGGFG GES ++  +LL AVTDV
Sbjct: 176  LNSTGGAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDV 235

Query: 964  LPKEKPRQICXXXXXXXXXXXVASGVDLFDSTHIYHLTLGGFALVFPLNRDERHISNSQL 785
            LP+E PR IC           +A+GVDLFDS +IYHLTLGGFAL FPL+       ++ L
Sbjct: 236  LPEEMPRMICGLGLPEEVLQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPDAHL 295

Query: 784  SDTGGDCTKINLRATVYRKDKSPIADNCRCYTCQNHTRAYINHLLNVHEMLAQILLEIHN 605
             D   D TKINLRA V+RKD SPI + C CYTC NHT+AYINHLLNVHEMLAQILLEIHN
Sbjct: 296  IDNASDMTKINLRAIVFRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLEIHN 355

Query: 604  THHYLGFFRTIREAIKNGEFDHFCQKFIEGRREHL 500
            T+HYLGFF++IREAIK G+F  F QKF+E RR HL
Sbjct: 356  TYHYLGFFQSIREAIKVGKFQQFHQKFVEERRNHL 390



 Score = 90.1 bits (222), Expect(2) = 1e-92
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = -2

Query: 1293 IRPAEYMEMISSLKPNLWASLVDEVPAWVLEKRNKTSVD*TVRWLDECLALD 1138
            IRP EY+EMISS+KP++WASL DEVP+WV +KRNKTSVD TV+WLDEC+AL+
Sbjct: 126  IRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECIALN 177