BLASTX nr result

ID: Coptis23_contig00013755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013755
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus...   238   5e-61
ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitoch...   233   1e-59
ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitoch...   233   2e-59
ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|1...   232   2e-59
gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]             221   6e-56

>ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223539121|gb|EEF40717.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 155

 Score =  238 bits (606), Expect = 5e-61
 Identities = 120/144 (83%), Positives = 127/144 (88%)
 Frame = -1

Query: 434 ILTRRPVSATIKLTXXXXXXXXXXXXXXALGQYRLNLMAFCKDFNARTQKYKPDTPMAVK 255
           ILTRRPV+ATI+LT              ALGQYRLNLMAFCKDFNARTQKYKPDTPMAV 
Sbjct: 7   ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVT 66

Query: 254 ITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKVKQSDPY 75
           ITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS RPGHVVAST++LKHVYEIAKVKQSDPY
Sbjct: 67  ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTVTLKHVYEIAKVKQSDPY 126

Query: 74  CQSMSLESISKSIIGTANSMGIKV 3
           CQ MSLESISKS+IGTAN+MGIKV
Sbjct: 127 CQYMSLESISKSVIGTANAMGIKV 150


>ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Cucumis
           sativus] gi|449503431|ref|XP_004161999.1| PREDICTED: 54S
           ribosomal protein L19, mitochondrial-like [Cucumis
           sativus]
          Length = 155

 Score =  233 bits (594), Expect = 1e-59
 Identities = 118/144 (81%), Positives = 125/144 (86%)
 Frame = -1

Query: 434 ILTRRPVSATIKLTXXXXXXXXXXXXXXALGQYRLNLMAFCKDFNARTQKYKPDTPMAVK 255
           ILTRRPV+ATI+LT              ALGQYRLNLMAFCKDFNARTQKYKP+TPMAV 
Sbjct: 7   ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMAVT 66

Query: 254 ITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKVKQSDPY 75
           ITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS RPGHVVAST+S+KH+YEIAKVKQSDPY
Sbjct: 67  ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPY 126

Query: 74  CQSMSLESISKSIIGTANSMGIKV 3
           CQ M LESI KSIIGTANSMGIKV
Sbjct: 127 CQYMPLESICKSIIGTANSMGIKV 150


>ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitochondrial [Vitis
           vinifera] gi|147806139|emb|CAN70008.1| hypothetical
           protein VITISV_038751 [Vitis vinifera]
          Length = 155

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/144 (81%), Positives = 126/144 (87%)
 Frame = -1

Query: 434 ILTRRPVSATIKLTXXXXXXXXXXXXXXALGQYRLNLMAFCKDFNARTQKYKPDTPMAVK 255
           ILTRRPVSATI+LT              ALGQYRLNLMAFCKDFNARTQKYKPDTPMAV 
Sbjct: 7   ILTRRPVSATIRLTVPAGAARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVT 66

Query: 254 ITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKVKQSDPY 75
           ITA+KDNTFEFTVKSPSVTWYLKKAAGI+ GSGRPGHVVAS+++LKH+YEIAKVKQSDPY
Sbjct: 67  ITAYKDNTFEFTVKSPSVTWYLKKAAGIELGSGRPGHVVASSVTLKHIYEIAKVKQSDPY 126

Query: 74  CQSMSLESISKSIIGTANSMGIKV 3
           CQ MSLESI KSIIGTAN+MGI+V
Sbjct: 127 CQYMSLESICKSIIGTANTMGIQV 150


>ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|118482503|gb|ABK93174.1|
           unknown [Populus trichocarpa]
           gi|222841763|gb|EEE79310.1| predicted protein [Populus
           trichocarpa]
          Length = 155

 Score =  232 bits (592), Expect = 2e-59
 Identities = 116/144 (80%), Positives = 126/144 (87%)
 Frame = -1

Query: 434 ILTRRPVSATIKLTXXXXXXXXXXXXXXALGQYRLNLMAFCKDFNARTQKYKPDTPMAVK 255
           ILTRRPV+ATI+LT              ALGQYRLNLMAFCKDFNARTQKYKPDTPM+V 
Sbjct: 7   ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMSVT 66

Query: 254 ITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKVKQSDPY 75
           ITAFKDNTFEFTVKSPSVTWYLKKAAG++SGSGRPGH+ AST++LKHVYEIAKVKQSDPY
Sbjct: 67  ITAFKDNTFEFTVKSPSVTWYLKKAAGVESGSGRPGHLEASTVTLKHVYEIAKVKQSDPY 126

Query: 74  CQSMSLESISKSIIGTANSMGIKV 3
           CQ MSLESI KSI+GTAN+MGIKV
Sbjct: 127 CQYMSLESICKSIMGTANTMGIKV 150


>gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]
          Length = 184

 Score =  221 bits (562), Expect = 6e-56
 Identities = 111/141 (78%), Positives = 120/141 (85%)
 Frame = -1

Query: 425 RRPVSATIKLTXXXXXXXXXXXXXXALGQYRLNLMAFCKDFNARTQKYKPDTPMAVKITA 246
           RRP+SATIKLT              ALGQYRLNLMAFCKDFNARTQKYKPDTPMAV ITA
Sbjct: 40  RRPISATIKLTVPAGAARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITA 99

Query: 245 FKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKVKQSDPYCQS 66
           FKDNTFEF VKSPS+TWYLK+AAGI+SGSGRPGHVV S+I+L HVYEIAKVKQSDP CQ 
Sbjct: 100 FKDNTFEFVVKSPSITWYLKRAAGIESGSGRPGHVVVSSITLTHVYEIAKVKQSDPNCQY 159

Query: 65  MSLESISKSIIGTANSMGIKV 3
           MSLE+I KSIIGTAN+MGI+V
Sbjct: 160 MSLEAICKSIIGTANTMGIQV 180


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