BLASTX nr result

ID: Coptis23_contig00013744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013744
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin...    92   6e-17
ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]...    91   1e-16
ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonin...    89   3e-16
emb|CBI25180.3| unnamed protein product [Vitis vinifera]               89   3e-16
emb|CBI25210.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1464

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/90 (47%), Positives = 57/90 (63%)
 Frame = +1

Query: 1    QVNNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHE 180
            Q N+LTG + +A  +S +L TLD+++NNLSG IP W            KGNH  G IP++
Sbjct: 1116 QENHLTGPLTKAFTRSMDLATLDIRNNNLSGGIPDWISMFSGLSILLLKGNHFQGKIPYQ 1175

Query: 181  FCQLNKILILDLSHNAFIGPIPPCFSNITF 270
             CQL+KI ILDLS+N+  G IP C + I F
Sbjct: 1176 LCQLSKITILDLSYNSLSGHIPSCLNKIQF 1205



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/84 (38%), Positives = 46/84 (54%)
 Frame = +1

Query: 7    NNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHEFC 186
            N+ +G +P+ L  S  L+ L + HN++SG +P W              N L G IP EFC
Sbjct: 1024 NHFSGKIPD-LSNSSGLERLYVSHNSISGKLPGWIGNMSNLAALVMPNNSLEGPIPVEFC 1082

Query: 187  QLNKILILDLSHNAFIGPIPPCFS 258
             L+ + +LDLS+N   G +P CFS
Sbjct: 1083 SLDALELLDLSNNNLSGSLPSCFS 1106


>ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]
            gi|223543309|gb|EEF44841.1| receptor-kinase, putative
            [Ricinus communis]
          Length = 2793

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/91 (47%), Positives = 54/91 (59%)
 Frame = +1

Query: 1    QVNNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHE 180
            Q N L GL+P  L +S NL  +DL++N  SG+IPSW             GN L G IP++
Sbjct: 1563 QKNGLNGLIPHVLSRSSNLVVVDLRNNKFSGNIPSWISQLSELHVLLLGGNALGGHIPNQ 1622

Query: 181  FCQLNKILILDLSHNAFIGPIPPCFSNITFG 273
             CQL  + I+DLSHN   G IP CF NI+FG
Sbjct: 1623 LCQLRNLKIMDLSHNLLCGSIPSCFHNISFG 1653



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/94 (43%), Positives = 52/94 (55%)
 Frame = +1

Query: 1    QVNNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHE 180
            Q N  TG +P + L    L TL+L+ NN SGSIP               GN L+G IP  
Sbjct: 2433 QGNRFTGSIPVSFLNFSKLLTLNLRDNNFSGSIPHAFGAFPNLRALLLGGNRLNGLIPDW 2492

Query: 181  FCQLNKILILDLSHNAFIGPIPPCFSNITFGKNG 282
             C+LN++ ILDLS N+F G IP C  N++FG  G
Sbjct: 2493 LCELNEVGILDLSMNSFSGSIPKCLYNLSFGSEG 2526



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 7    NNLTGLMPEALLKS-PNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHEF 183
            N++ G  P     S  NL+ LDL  +  +G++P               GNH +GS+   F
Sbjct: 1991 NSMAGSFPSQEFASFKNLEVLDLSLSEFTGTVPQHSWAPLSLKVLSLFGNHFNGSLT-SF 2049

Query: 184  CQLNKILILDLSHNAFIGPIPPCFSNIT 267
            C L ++  LDLS+N F G +PPC  N+T
Sbjct: 2050 CGLKRLQQLDLSYNHFGGNLPPCLHNMT 2077


>ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1047

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/97 (47%), Positives = 58/97 (59%)
 Frame = +1

Query: 1   QVNNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHE 180
           Q N  TG +P+ +L    L TLDL  NN+SG IP              +GN+  G IP+ 
Sbjct: 685 QGNAFTGSIPKHVLNPEFLLTLDLGDNNISGKIPHSIGQFSELRVLSLRGNNFIGQIPNS 744

Query: 181 FCQLNKILILDLSHNAFIGPIPPCFSNITFGKNGTVE 291
            CQL+K+ ILDLS+N F GPIP CF+N+TFGK G  E
Sbjct: 745 LCQLSKMSILDLSNNRFSGPIPHCFNNMTFGKRGANE 781


>emb|CBI25180.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/97 (47%), Positives = 58/97 (59%)
 Frame = +1

Query: 1   QVNNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHE 180
           Q N  TG +P+ +L    L TLDL  NN+SG IP              +GN+  G IP+ 
Sbjct: 124 QGNAFTGSIPKHVLNPEFLLTLDLGDNNISGKIPHSIGQFSELRVLSLRGNNFIGQIPNS 183

Query: 181 FCQLNKILILDLSHNAFIGPIPPCFSNITFGKNGTVE 291
            CQL+K+ ILDLS+N F GPIP CF+N+TFGK G  E
Sbjct: 184 LCQLSKMSILDLSNNRFSGPIPHCFNNMTFGKRGANE 220


>emb|CBI25210.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
 Frame = +1

Query: 7   NNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHEFC 186
           N LT L+P  L ++ +L TLDL+ N LSG+IP W            KGN    SIP   C
Sbjct: 566 NELTALIPYVLSEARSLITLDLRDNKLSGTIPPWISSLSNLRVLLLKGNRFQDSIPAHLC 625

Query: 187 QLNKILILDLSHNAFIGPIPPCFSN-ITFGKNGTVE 291
           QL KI I+DLSHN   G IP CF+  ITFG+ G  E
Sbjct: 626 QLKKIRIMDLSHNNLSGSIPSCFNQIITFGRKGARE 661



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +1

Query: 7   NNLTGLMPEALLKSPNLKTLDLKHNNLSGSIPSWXXXXXXXXXXXXKGNHLSGSIPHEFC 186
           NNL+G + E LL+S +L+ LD+ +N+ SG IP W              N L G IP  FC
Sbjct: 470 NNLSGEISEGLLESSSLELLDISNNSFSGVIPDWIGNFSLLTSLVLSRNSLEGEIPTGFC 529

Query: 187 QLNKILILDLSHNAFIGP--IPPC 252
           +LNK+L LDLS N  IGP  IPPC
Sbjct: 530 KLNKLLFLDLSENK-IGPASIPPC 552


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