BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013741
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16803.3| unnamed protein product [Vitis vinifera]              444   e-142
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   444   e-142
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   444   e-140
ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [S...   437   e-138
dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]    436   e-138

>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  444 bits (1141), Expect(2) = e-142
 Identities = 216/284 (76%), Positives = 251/284 (88%)
 Frame = -1

Query: 1166 YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 987
            YN  TG+ESL+IV TSKAQALQRSGRAGRE PGKCFRLYPESEF +L +ST PEIKRCNL
Sbjct: 1074 YNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQLADSTEPEIKRCNL 1133

Query: 986  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 807
            SNVILQLKALGVDD++GFDF+EKPSR+AIVK+LE LFLLGA+T+DSKL+ P+GHQMARLP
Sbjct: 1134 SNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDSKLSDPIGHQMARLP 1193

Query: 806  LDPIYAKALIMASEFSCMEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 627
            LDP+Y+KALI+AS+F+C+EEMLIAVAMLSVESIFYTPREKL+EAR A K FSS EGDH+T
Sbjct: 1194 LDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHIT 1253

Query: 626  LVNVFRSSAEFLEKRKMSGSKDKTAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 447
            L+NV+R+S EF+EK K    K+KT E+ L KWCK+NFIN RSLRHARD+HSQIR H EQM
Sbjct: 1254 LINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKENFINSRSLRHARDIHSQIRRHAEQM 1312

Query: 446  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIV 315
            GL + SCGD+++QFRRCL ASFFLNAA KQP+G+YR  A GQ V
Sbjct: 1313 GLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASGQSV 1356



 Score = 90.5 bits (223), Expect(2) = e-142
 Identities = 44/51 (86%), Positives = 45/51 (88%)
 Frame = -2

Query: 217  IHPSSVLFRTKAECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 65
            IHPSSVLFRTK ECIIFNELV+TN  YIRNIT ID LWLPELAPQYYA QN
Sbjct: 1358 IHPSSVLFRTKPECIIFNELVQTNHCYIRNITRIDFLWLPELAPQYYAVQN 1408


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
            vinifera]
          Length = 713

 Score =  444 bits (1141), Expect(2) = e-142
 Identities = 216/284 (76%), Positives = 251/284 (88%)
 Frame = -1

Query: 1166 YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 987
            YN  TG+ESL+IV TSKAQALQRSGRAGRE PGKCFRLYPESEF +L +ST PEIKRCNL
Sbjct: 379  YNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQLADSTEPEIKRCNL 438

Query: 986  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 807
            SNVILQLKALGVDD++GFDF+EKPSR+AIVK+LE LFLLGA+T+DSKL+ P+GHQMARLP
Sbjct: 439  SNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDSKLSDPIGHQMARLP 498

Query: 806  LDPIYAKALIMASEFSCMEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 627
            LDP+Y+KALI+AS+F+C+EEMLIAVAMLSVESIFYTPREKL+EAR A K FSS EGDH+T
Sbjct: 499  LDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHIT 558

Query: 626  LVNVFRSSAEFLEKRKMSGSKDKTAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 447
            L+NV+R+S EF+EK K    K+KT E+ L KWCK+NFIN RSLRHARD+HSQIR H EQM
Sbjct: 559  LINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKENFINSRSLRHARDIHSQIRRHAEQM 617

Query: 446  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIV 315
            GL + SCGD+++QFRRCL ASFFLNAA KQP+G+YR  A GQ V
Sbjct: 618  GLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASGQSV 661



 Score = 90.5 bits (223), Expect(2) = e-142
 Identities = 44/51 (86%), Positives = 45/51 (88%)
 Frame = -2

Query: 217 IHPSSVLFRTKAECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 65
           IHPSSVLFRTK ECIIFNELV+TN  YIRNIT ID LWLPELAPQYYA QN
Sbjct: 663 IHPSSVLFRTKPECIIFNELVQTNHCYIRNITRIDFLWLPELAPQYYAVQN 713


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 690

 Score =  444 bits (1143), Expect(2) = e-140
 Identities = 217/288 (75%), Positives = 252/288 (87%), Gaps = 4/288 (1%)
 Frame = -1

Query: 1166 YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 987
            Y+P  GMESL +VPTSKAQALQRSGRAGREGPGKCFRLYPE EF KL +ST PEIKRCNL
Sbjct: 351  YDPVKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTKPEIKRCNL 410

Query: 986  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 807
            SNVILQLKALGVDD++GFDF+EKPSR AI+K+LEHLFLLGALT++ KL+ PVGHQMARLP
Sbjct: 411  SNVILQLKALGVDDIIGFDFIEKPSRAAIIKSLEHLFLLGALTDECKLSDPVGHQMARLP 470

Query: 806  LDPIYAKALIMASEFSCMEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 627
            LDPIY+KALI+AS+F+C+EEMLI VAMLSVESIFY PREK +E+R A K FSS +GDHLT
Sbjct: 471  LDPIYSKALILASQFNCLEEMLITVAMLSVESIFYAPREKSEESRTAMKCFSSPDGDHLT 530

Query: 626  LVNVFRSSAEFLEKRKMSGSKDKT----AERSLGKWCKDNFINGRSLRHARDVHSQIRGH 459
            L++V+R++ E LEKRKM  + +K      E+ L KWCK+NFINGRSLRHARD+HSQIRGH
Sbjct: 531  LISVYRAADELLEKRKMELNNEKNFKGKGEKILRKWCKENFINGRSLRHARDIHSQIRGH 590

Query: 458  VEQMGLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIV 315
            VEQMGLR++SCGD+++QFRRCL ASFFLNAA KQPDG+YR  A GQ V
Sbjct: 591  VEQMGLRVSSCGDDMLQFRRCLAASFFLNAALKQPDGTYRALASGQTV 638



 Score = 80.9 bits (198), Expect(2) = e-140
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -2

Query: 217 IHPSSVLFRTKAECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 65
           IHP SVLFR+KAEC+IFNELV+T+  YIRNIT ID LWL ELAP YYA Q+
Sbjct: 640 IHPFSVLFRSKAECVIFNELVQTSKKYIRNITRIDYLWLTELAPHYYAMQS 690


>ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [Sorghum bicolor]
            gi|241946902|gb|EES20047.1| hypothetical protein
            SORBIDRAFT_09g030450 [Sorghum bicolor]
          Length = 485

 Score =  437 bits (1125), Expect(2) = e-138
 Identities = 210/284 (73%), Positives = 252/284 (88%)
 Frame = -1

Query: 1166 YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 987
            YNP TGMESL I+P SKAQALQRSGRAGREGPGKCFRL+ ESEF KLV+STVPEIKRCNL
Sbjct: 150  YNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQESEFDKLVDSTVPEIKRCNL 209

Query: 986  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 807
            SNV+LQLKALG+DD++GFDFMEKPSR AI+K+LE L LLGALT+D KL+ PVGHQMARLP
Sbjct: 210  SNVVLQLKALGIDDIIGFDFMEKPSRTAILKSLEQLILLGALTDDYKLSDPVGHQMARLP 269

Query: 806  LDPIYAKALIMASEFSCMEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 627
            LDP+Y+KALI+AS+F C+EEMLI V+MLSVESIF++ REKL+EAR ARK F S EGDH+T
Sbjct: 270  LDPMYSKALIVASKFKCLEEMLIVVSMLSVESIFFSVREKLEEARAARKGFESAEGDHIT 329

Query: 626  LVNVFRSSAEFLEKRKMSGSKDKTAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 447
            LVNV+R++AE LEK + + +K+KT E++L +WC++NFIN RSLRHARDVHSQI+GH +QM
Sbjct: 330  LVNVYRAAAECLEKSRNANAKEKTMEKALNRWCRENFINYRSLRHARDVHSQIQGHAQQM 389

Query: 446  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIV 315
            GL ++SCGD++V FRRCLT++FFLNAA +QPDGSYR  A GQ V
Sbjct: 390  GLNLSSCGDDMVLFRRCLTSAFFLNAAMRQPDGSYRALATGQSV 433



 Score = 82.4 bits (202), Expect(2) = e-138
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = -2

Query: 217 IHPSSVLFRTKAECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQ 68
           IHPSSVLFRTK +C+IFNELVRT  +Y++N+T ID LWL ELAPQYYA +
Sbjct: 435 IHPSSVLFRTKPDCVIFNELVRTTQNYVKNLTRIDPLWLAELAPQYYATE 484


>dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  436 bits (1122), Expect(2) = e-138
 Identities = 210/284 (73%), Positives = 251/284 (88%)
 Frame = -1

Query: 1166 YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 987
            YNP TGMESL I+P SKAQALQRSGRAGREGPGKCFRL+ E EF KL EST+PEIKRCNL
Sbjct: 362  YNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQECEFDKLAESTIPEIKRCNL 421

Query: 986  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 807
            +NV+LQLKALG+DD++GFDFMEKP R +I+K+LE L LLGALT+D KL+ PVG QMARLP
Sbjct: 422  ANVVLQLKALGIDDIIGFDFMEKPLRTSILKSLEQLILLGALTDDYKLSDPVGKQMARLP 481

Query: 806  LDPIYAKALIMASEFSCMEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 627
            LDP+Y+KALI++SEF C+EEMLI V+MLSVESIF+TPREKL+EAR ARKSF S EGDH+T
Sbjct: 482  LDPMYSKALIVSSEFKCLEEMLIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHIT 541

Query: 626  LVNVFRSSAEFLEKRKMSGSKDKTAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 447
            LVNV+R++AE LEK K + +K+KT E++L +WC +NFIN RSLRHARDVHSQI+GHV+QM
Sbjct: 542  LVNVYRAAAECLEKSKNANAKEKTMEKALNRWCFENFINYRSLRHARDVHSQIQGHVQQM 601

Query: 446  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIV 315
            GL ++SCGD++VQFRRCLTA+FFLNAA +QPDGS+R  A GQ V
Sbjct: 602  GLNLSSCGDDMVQFRRCLTAAFFLNAAMRQPDGSFRALATGQSV 645



 Score = 81.6 bits (200), Expect(2) = e-138
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = -2

Query: 217 IHPSSVLFRTKAECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 65
           +HPSSVLFRTK +C+IFNELVRT  +Y++N+T ID LWL ELAPQYYA ++
Sbjct: 647 MHPSSVLFRTKPDCVIFNELVRTTQNYVKNLTRIDPLWLAELAPQYYATED 697