BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013730
         (2059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   851   0.0  
ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic su...   830   0.0  
gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indi...   829   0.0  
ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [S...   828   0.0  
ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [S...   827   0.0  

>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  851 bits (2199), Expect = 0.0
 Identities = 420/483 (86%), Positives = 443/483 (91%)
 Frame = +2

Query: 2    CYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSNLQKGXXXXXXXXXXXXXXXXXXXXXX 181
            CYC+LVTPEDVRK NLPPECVNKTPSGE FVKS+LQKG                      
Sbjct: 607  CYCTLVTPEDVRKLNLPPECVNKTPSGEIFVKSSLQKGILPEILEELLAARKRAKADLKE 666

Query: 182  XXXPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 361
               PLEKAVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTSYGRQMIEHTKKLVE
Sbjct: 667  AKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVE 726

Query: 362  ERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVDAAMNLGREAAEYISATFIKPIKLEFEK 541
            E+F TLGGYEHNAEVIYGDTDSVMV FGV TV+AAMNLGREAAEYIS TF+KPIKLEFEK
Sbjct: 727  EKFTTLGGYEHNAEVIYGDTDSVMVLFGVSTVEAAMNLGREAAEYISGTFMKPIKLEFEK 786

Query: 542  VYHPYLLINKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRDI 721
            VY+PYLLI+KKRYAGL WTNPDKFDKMDTKGIETVRRDNCLLVKNLV ECLHKILIDRDI
Sbjct: 787  VYYPYLLISKKRYAGLLWTNPDKFDKMDTKGIETVRRDNCLLVKNLVKECLHKILIDRDI 846

Query: 722  PGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGEDYANKAAHVELAERMRKRDAATAPN 901
            PGAVQYVKNTI+DLLMNRMDLSLLVITKGLTKTG+DY  KAAHVELAERMRKRDAATAPN
Sbjct: 847  PGAVQYVKNTIADLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPN 906

Query: 902  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLENQISKPLLRLFDPILKNA 1081
            VGDRVPYVIIKAAKGAKAYE+SEDPIYVLENNIPID QYYLENQISKPLLR+F+PILKNA
Sbjct: 907  VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPILKNA 966

Query: 1082 SSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCLGCKALISNAEQTLCSHCKGREAELYC 1261
            S ELLHGSHTR++SISTPSNSGIMKFAKKQLSC+GCKALISN ++TLCSHCKGREAELYC
Sbjct: 967  SKELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISNTDRTLCSHCKGREAELYC 1026

Query: 1262 KTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDR 1441
            KTVANV++LE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFYRRKKAQKDMAEAK+QL+R
Sbjct: 1027 KTVANVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLER 1086

Query: 1442 WQF 1450
            W F
Sbjct: 1087 WNF 1089


>ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
            distachyon]
          Length = 1106

 Score =  830 bits (2144), Expect = 0.0
 Identities = 411/483 (85%), Positives = 434/483 (89%)
 Frame = +2

Query: 2    CYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSNLQKGXXXXXXXXXXXXXXXXXXXXXX 181
            CYC+LV PEDVRK NLPPE + KTPSGE FVK  LQKG                      
Sbjct: 624  CYCTLVPPEDVRKLNLPPESLYKTPSGEIFVKPELQKGILPEILEELLTARKRAKADLKE 683

Query: 182  XXXPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 361
               P E+AVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE
Sbjct: 684  AKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 743

Query: 362  ERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVDAAMNLGREAAEYISATFIKPIKLEFEK 541
            ++F TLGGYEHNAEVIYGDTDSVMVQFGV TV+ AM LGREAA+YIS TFIKPIKLEFEK
Sbjct: 744  DKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEK 803

Query: 542  VYHPYLLINKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRDI 721
            VY PYLLI+KKRYAGL+WTNP+KFDKMDTKGIETVRRDNCLLVKNLV ECLHKIL+DRD+
Sbjct: 804  VYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDV 863

Query: 722  PGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGEDYANKAAHVELAERMRKRDAATAPN 901
            PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTGEDYA KAAHVELAERMRKRDAATAP 
Sbjct: 864  PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDAATAPT 923

Query: 902  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLENQISKPLLRLFDPILKNA 1081
            VGDRVPYVIIKAAKGAKAYEKSEDPIYVL+NNIPID QYYLENQISKPLLR+F+PILKNA
Sbjct: 924  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNA 983

Query: 1082 SSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCLGCKALISNAEQTLCSHCKGREAELYC 1261
            S ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CLGCKA+IS   QTLCSHCKGREAELYC
Sbjct: 984  SRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGPNQTLCSHCKGREAELYC 1043

Query: 1262 KTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDR 1441
            KTVANV+DLE+LFG+LWTQCQECQ SLHQDVLCTSRDCPIFYRR+KAQKDMAEA+VQLDR
Sbjct: 1044 KTVANVSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARVQLDR 1103

Query: 1442 WQF 1450
            W F
Sbjct: 1104 WDF 1106


>gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
          Length = 1087

 Score =  829 bits (2142), Expect = 0.0
 Identities = 408/483 (84%), Positives = 435/483 (90%)
 Frame = +2

Query: 2    CYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSNLQKGXXXXXXXXXXXXXXXXXXXXXX 181
            CYC+LV PED RK NLPPE VNKTPSGETFVK ++QKG                      
Sbjct: 605  CYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAARKRAKADLKE 664

Query: 182  XXXPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 361
               P E+AVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE
Sbjct: 665  AKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 724

Query: 362  ERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVDAAMNLGREAAEYISATFIKPIKLEFEK 541
            ++F TLGGYEHNAEVIYGDTDSVMVQFGV TV+ AM LGREAA+YIS TFIKPIKLEFEK
Sbjct: 725  DKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEK 784

Query: 542  VYHPYLLINKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRDI 721
            +Y PYLLI+KKRYAGL+WTNP+KFDKMDTKGIETVRRDNCLLVKNLV ECLHKIL+DRD+
Sbjct: 785  IYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDV 844

Query: 722  PGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGEDYANKAAHVELAERMRKRDAATAPN 901
            PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTGEDYA KAAHVELAERMRKRDAATAP 
Sbjct: 845  PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDAATAPT 904

Query: 902  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLENQISKPLLRLFDPILKNA 1081
            VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIPID QYYLENQISKPLLR+F+PILKNA
Sbjct: 905  VGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNA 964

Query: 1082 SSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCLGCKALISNAEQTLCSHCKGREAELYC 1261
            S ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CLGCKA+IS + QTLCSHCKGREAELYC
Sbjct: 965  SRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGSNQTLCSHCKGREAELYC 1024

Query: 1262 KTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDR 1441
            KTV NV++LE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFYRR+KAQKDMAEA+VQL R
Sbjct: 1025 KTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARVQLQR 1084

Query: 1442 WQF 1450
            W F
Sbjct: 1085 WDF 1087


>ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
            gi|241931412|gb|EES04557.1| hypothetical protein
            SORBIDRAFT_04g004200 [Sorghum bicolor]
          Length = 1101

 Score =  828 bits (2139), Expect = 0.0
 Identities = 408/483 (84%), Positives = 433/483 (89%)
 Frame = +2

Query: 2    CYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSNLQKGXXXXXXXXXXXXXXXXXXXXXX 181
            CYC+LV PED RK NLPPE +NKTPSGE FVK  LQKG                      
Sbjct: 619  CYCTLVPPEDARKLNLPPESINKTPSGEIFVKPELQKGILPEILEELLAARKRAKADLKE 678

Query: 182  XXXPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 361
               PLE+AVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE
Sbjct: 679  AKDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 738

Query: 362  ERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVDAAMNLGREAAEYISATFIKPIKLEFEK 541
            ++F T+GGYEHNAEVIYGDTDSVMVQFGV TV+ AM LGREAA+YIS TF KPIKLEFEK
Sbjct: 739  DKFTTVGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFTKPIKLEFEK 798

Query: 542  VYHPYLLINKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRDI 721
            VY PYLLI+KKRYAGL+WTNP+KFDKMD KGIETVRRDNCLLVKNLV ECLHKIL+DRD+
Sbjct: 799  VYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNCLLVKNLVTECLHKILVDRDV 858

Query: 722  PGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGEDYANKAAHVELAERMRKRDAATAPN 901
            PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTGEDYA KAAHVELAERMRKRD ATAP 
Sbjct: 859  PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDPATAPT 918

Query: 902  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLENQISKPLLRLFDPILKNA 1081
            VGDRVPYVIIKAAKGAKAYEKSEDPIYVL+NNIPID QYYLENQISKPLLR+F+PILKNA
Sbjct: 919  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNA 978

Query: 1082 SSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCLGCKALISNAEQTLCSHCKGREAELYC 1261
            S ELLHGSHTR+VSISTPSNSGIMKFAKKQL+CLGCKA+IS A QTLCSHCKGREAELYC
Sbjct: 979  SKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSHCKGREAELYC 1038

Query: 1262 KTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDR 1441
            KTVANV+DLE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFYRR+KAQKDMAEA++QLDR
Sbjct: 1039 KTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARLQLDR 1098

Query: 1442 WQF 1450
            W F
Sbjct: 1099 WDF 1101


>ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
            gi|241936293|gb|EES09438.1| hypothetical protein
            SORBIDRAFT_05g005680 [Sorghum bicolor]
          Length = 1099

 Score =  827 bits (2137), Expect = 0.0
 Identities = 408/483 (84%), Positives = 432/483 (89%)
 Frame = +2

Query: 2    CYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSNLQKGXXXXXXXXXXXXXXXXXXXXXX 181
            CYC+LV PED RK NLPPE +NKTPSGE FVK  LQKG                      
Sbjct: 617  CYCTLVPPEDARKLNLPPESINKTPSGEIFVKPELQKGILPEILEELLAARKRAKADLKE 676

Query: 182  XXXPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 361
               PLE+AVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE
Sbjct: 677  AKDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVE 736

Query: 362  ERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVDAAMNLGREAAEYISATFIKPIKLEFEK 541
            ++F T+GGYEHNAEVIYGDTDSVMVQFGV TV  AM LGREAA+YIS TF KPIKLEFEK
Sbjct: 737  DKFTTVGGYEHNAEVIYGDTDSVMVQFGVSTVQDAMKLGREAADYISGTFTKPIKLEFEK 796

Query: 542  VYHPYLLINKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILIDRDI 721
            VY PYLLI+KKRYAGL+WTNP+KFDKMD KGIETVRRDNCLLVKNLV ECLHKIL+DRD+
Sbjct: 797  VYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNCLLVKNLVTECLHKILVDRDV 856

Query: 722  PGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGEDYANKAAHVELAERMRKRDAATAPN 901
            PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTGEDYA KAAHVELAERMRKRD ATAP 
Sbjct: 857  PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDPATAPT 916

Query: 902  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLENQISKPLLRLFDPILKNA 1081
            VGDRVPYVIIKAAKGAKAYEKSEDPIYVL+NNIPID QYYLENQISKPLLR+F+PILKNA
Sbjct: 917  VGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNA 976

Query: 1082 SSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCLGCKALISNAEQTLCSHCKGREAELYC 1261
            S ELLHGSHTR+VSISTPSNSGIMKFAKKQL+CLGCKA+IS A QTLCSHCKGREAELYC
Sbjct: 977  SKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSHCKGREAELYC 1036

Query: 1262 KTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDR 1441
            KTVANV+DLE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFYRR+KAQKDMAEA++QLDR
Sbjct: 1037 KTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARLQLDR 1096

Query: 1442 WQF 1450
            W F
Sbjct: 1097 WDF 1099