BLASTX nr result
ID: Coptis23_contig00013725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013725
(1166 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521236.1| conserved hypothetical protein [Ricinus comm... 451 e-124
ref|XP_002304290.1| predicted protein [Populus trichocarpa] gi|2... 442 e-121
ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266... 427 e-117
emb|CBI29499.3| unnamed protein product [Vitis vinifera] 427 e-117
ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524... 418 e-114
>ref|XP_002521236.1| conserved hypothetical protein [Ricinus communis]
gi|223539504|gb|EEF41092.1| conserved hypothetical
protein [Ricinus communis]
Length = 506
Score = 451 bits (1161), Expect = e-124
Identities = 223/346 (64%), Positives = 271/346 (78%), Gaps = 1/346 (0%)
Frame = -3
Query: 1098 MDFSPLVSSSLVKIIDFRVFVMLWCGIETGLACFDKSEVKSTLFDSLKQCGSLLSGKDGN 919
+D S LV SS ++ IDFRVF LWCG+ C + +S+LFDSL QCGS+LSG GN
Sbjct: 160 IDISSLVPSS-IRAIDFRVFASLWCGVNKDFICTNNLNAESSLFDSLGQCGSVLSGFTGN 218
Query: 918 VEGCLYAVGEDCRTTV*TYQQDSEDGMLDSFQPDEQLRKKKKVSYTRKRRDVYKALGPGS 739
+ CLYAV EDCRTTV TY+ +DG+LDSFQPDEQL+KKK +SY R+ +DVYK LG GS
Sbjct: 219 IGKCLYAVVEDCRTTVWTYKNGEKDGVLDSFQPDEQLKKKKNISYIRRHQDVYKVLGTGS 278
Query: 738 EAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIISAGKKFA 559
E+ SA++LAFGSLFT+PYKGSELYIDIH+A RD RI SL K L FVPE+++AG+KFA
Sbjct: 279 ESESASVLAFGSLFTAPYKGSELYIDIHEAQRDQRIQSLIKKSQFLPFVPELLNAGRKFA 338
Query: 558 IEKIKAPFLCTQLRLLDGQFKNHWKSTFLGLEQKLESLRKDGNLPIHIFVMTDLSEANWT 379
+E IKAPFLC QLRLLDGQFKNHWK+TFLGL+QKLE+L++ G PIHIFVMTDL + NWT
Sbjct: 339 LETIKAPFLCAQLRLLDGQFKNHWKTTFLGLKQKLETLKQSGPQPIHIFVMTDLPQGNWT 398
Query: 378 DSYLGKLLKDSDTYKLHILQEGDELVVQAAKKIANAEYGLRSGSLSRNLN-TNKKNKNCR 202
SYLG L D+ +KLH L+E D+LV+Q AKK+A AE+GLR GSL +LN +K +C
Sbjct: 399 GSYLGDLADDTKHFKLHFLREDDDLVIQTAKKLATAEHGLRLGSLPISLNGVSKMKMHCS 458
Query: 201 VDILPDILLYVEEAVCSCGKLGFVGTSGSTIAESVELLRKNGVCLN 64
LPDILLYVEE+VC+C LGFVGT+GSTIAES+EL+RK+ VC N
Sbjct: 459 HQKLPDILLYVEESVCACASLGFVGTTGSTIAESIELMRKSDVCTN 504
>ref|XP_002304290.1| predicted protein [Populus trichocarpa] gi|222841722|gb|EEE79269.1|
predicted protein [Populus trichocarpa]
Length = 405
Score = 442 bits (1136), Expect = e-121
Identities = 219/344 (63%), Positives = 269/344 (78%), Gaps = 1/344 (0%)
Frame = -3
Query: 1098 MDFSPLVSSSLVKIIDFRVFVMLWCGIETGLACFDKSEVKSTLFDSLKQCGSLLSGKDGN 919
+D S LV SS ++ IDFRVF WC ++ C + +S+LFDSL CGS+LSG DGN
Sbjct: 60 IDISSLVPSS-IQAIDFRVFASQWCNVKMDFTCSNDLNAQSSLFDSLNLCGSILSGIDGN 118
Query: 918 VEGCLYAVGEDCRTTV*TYQQDSEDGMLDSFQPDEQLRKKKKVSYTRKRRDVYKALGPGS 739
V+ CLYAV EDCRTTV TY+ ED + DSFQPDEQL+KKKK+SY R+R+DVYK+LGPGS
Sbjct: 119 VDKCLYAVDEDCRTTVWTYKNGDEDRVFDSFQPDEQLKKKKKISYVRRRQDVYKSLGPGS 178
Query: 738 EAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIISAGKKFA 559
EAGSAT+LAFGSLFT+PYKGSEL+IDIH+A RD RI SL + L FVPEI++AGKKFA
Sbjct: 179 EAGSATVLAFGSLFTAPYKGSELHIDIHEARRDQRIQSLIDNSEFLPFVPEILNAGKKFA 238
Query: 558 IEKIKAPFLCTQLRLLDGQFKNHWKSTFLGLEQKLESLRKDGNLPIHIFVMTDLSEANWT 379
+E IKAPFLC QLRLLDGQFKNHWK+TF GL+QKLE L++ G+ PIHIFVMTDL + NWT
Sbjct: 239 LETIKAPFLCAQLRLLDGQFKNHWKATFQGLKQKLEVLKQSGSKPIHIFVMTDLPQGNWT 298
Query: 378 DSYLGKLLKDSDTYKLHILQEGDELVVQAAKKIANAEYGLRSGSLSRNLNTNKKNK-NCR 202
S+LG + + + +KL+ L+E DELV + AK +A A +GLR GS+ R+ N K K NC
Sbjct: 299 GSFLGDMASEVNHFKLYFLREEDELVKKTAKNLAVAGHGLRFGSVPRSHNGESKMKMNCP 358
Query: 201 VDILPDILLYVEEAVCSCGKLGFVGTSGSTIAESVELLRKNGVC 70
LPDILLY+E++VCSC LGFVGT+GSTIAES+EL+RK+ VC
Sbjct: 359 HQRLPDILLYIEKSVCSCASLGFVGTAGSTIAESIELMRKSDVC 402
>ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266043 [Vitis vinifera]
Length = 482
Score = 427 bits (1097), Expect = e-117
Identities = 213/343 (62%), Positives = 266/343 (77%)
Frame = -3
Query: 1098 MDFSPLVSSSLVKIIDFRVFVMLWCGIETGLACFDKSEVKSTLFDSLKQCGSLLSGKDGN 919
+D S LVS S+++ IDFR F+ LWCG+ CF++S +S+L DSLKQCGS LSG DGN
Sbjct: 146 IDLSSLVSISVIQAIDFRDFISLWCGVNVDFDCFNESNDQSSLLDSLKQCGSRLSGLDGN 205
Query: 918 VEGCLYAVGEDCRTTV*TYQQDSEDGMLDSFQPDEQLRKKKKVSYTRKRRDVYKALGPGS 739
V+ C+YA+ EDCRTTV TYQQ+ +D +LDSFQPDEQL+KKKK+SY RKRRDVYK LGPGS
Sbjct: 206 VDKCIYALDEDCRTTVWTYQQN-DDEVLDSFQPDEQLKKKKKISYIRKRRDVYKTLGPGS 264
Query: 738 EAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIISAGKKFA 559
+A SAT+LAFGSLFT+PYKGSELYIDI++APRD RI+SL K++ L FVP I SA K++A
Sbjct: 265 KAESATVLAFGSLFTAPYKGSELYIDINEAPRDQRISSLIQKIEFLPFVPLITSAAKEYA 324
Query: 558 IEKIKAPFLCTQLRLLDGQFKNHWKSTFLGLEQKLESLRKDGNLPIHIFVMTDLSEANWT 379
IE IK PFLC QLRLLDGQFKNHWK+TFL L+ K++SL+K G LPI IFVMTDL EA+W
Sbjct: 325 IETIKGPFLCAQLRLLDGQFKNHWKATFLALKNKVDSLKK-GPLPISIFVMTDLPEADWH 383
Query: 378 DSYLGKLLKDSDTYKLHILQEGDELVVQAAKKIANAEYGLRSGSLSRNLNTNKKNKNCRV 199
SYL L +DS + KL++L+E DELV++ AKK+ + +G+R + C
Sbjct: 384 GSYLEDLARDSGSVKLYVLREKDELVIRTAKKLIESGHGMR------------LKQQCPH 431
Query: 198 DILPDILLYVEEAVCSCGKLGFVGTSGSTIAESVELLRKNGVC 70
+LPDILLY+EE VCSC LGFVGT+GSTIAE +E++RK +C
Sbjct: 432 QVLPDILLYIEETVCSCASLGFVGTTGSTIAEGIEVMRKFNIC 474
>emb|CBI29499.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 427 bits (1097), Expect = e-117
Identities = 213/343 (62%), Positives = 266/343 (77%)
Frame = -3
Query: 1098 MDFSPLVSSSLVKIIDFRVFVMLWCGIETGLACFDKSEVKSTLFDSLKQCGSLLSGKDGN 919
+D S LVS S+++ IDFR F+ LWCG+ CF++S +S+L DSLKQCGS LSG DGN
Sbjct: 146 IDLSSLVSISVIQAIDFRDFISLWCGVNVDFDCFNESNDQSSLLDSLKQCGSRLSGLDGN 205
Query: 918 VEGCLYAVGEDCRTTV*TYQQDSEDGMLDSFQPDEQLRKKKKVSYTRKRRDVYKALGPGS 739
V+ C+YA+ EDCRTTV TYQQ+ +D +LDSFQPDEQL+KKKK+SY RKRRDVYK LGPGS
Sbjct: 206 VDKCIYALDEDCRTTVWTYQQN-DDEVLDSFQPDEQLKKKKKISYIRKRRDVYKTLGPGS 264
Query: 738 EAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIISAGKKFA 559
+A SAT+LAFGSLFT+PYKGSELYIDI++APRD RI+SL K++ L FVP I SA K++A
Sbjct: 265 KAESATVLAFGSLFTAPYKGSELYIDINEAPRDQRISSLIQKIEFLPFVPLITSAAKEYA 324
Query: 558 IEKIKAPFLCTQLRLLDGQFKNHWKSTFLGLEQKLESLRKDGNLPIHIFVMTDLSEANWT 379
IE IK PFLC QLRLLDGQFKNHWK+TFL L+ K++SL+K G LPI IFVMTDL EA+W
Sbjct: 325 IETIKGPFLCAQLRLLDGQFKNHWKATFLALKNKVDSLKK-GPLPISIFVMTDLPEADWH 383
Query: 378 DSYLGKLLKDSDTYKLHILQEGDELVVQAAKKIANAEYGLRSGSLSRNLNTNKKNKNCRV 199
SYL L +DS + KL++L+E DELV++ AKK+ + +G+R + C
Sbjct: 384 GSYLEDLARDSGSVKLYVLREKDELVIRTAKKLIESGHGMR------------LKQQCPH 431
Query: 198 DILPDILLYVEEAVCSCGKLGFVGTSGSTIAESVELLRKNGVC 70
+LPDILLY+EE VCSC LGFVGT+GSTIAE +E++RK +C
Sbjct: 432 QVLPDILLYIEETVCSCASLGFVGTTGSTIAEGIEVMRKFNIC 474
>ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524930|gb|AET05384.1| CigA
protein [Medicago truncatula]
Length = 486
Score = 418 bits (1075), Expect = e-114
Identities = 209/344 (60%), Positives = 261/344 (75%), Gaps = 1/344 (0%)
Frame = -3
Query: 1098 MDFSPLVSSSLVKIIDFRVFVMLWCGIETGLACFDKSEVKSTLFDSLKQCGSLLSGKDGN 919
+D S LVSSSLV++ID R FV +WCGI LAC + + +S++ +SLKQCGSLLSG GN
Sbjct: 144 IDISSLVSSSLVRVIDLRDFVSIWCGISLDLACNNDPKSQSSVSESLKQCGSLLSGFHGN 203
Query: 918 VEGCLYAVGEDCRTTV*TYQQDS-EDGMLDSFQPDEQLRKKKKVSYTRKRRDVYKALGPG 742
+ C+YA+ EDCRTTV TY D EDGMLDSFQPDEQL+++KK+SY R+RRDV++ LGPG
Sbjct: 204 IAKCIYAINEDCRTTVWTYHVDGHEDGMLDSFQPDEQLKQRKKISYVRRRRDVFRTLGPG 263
Query: 741 SEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIISAGKKF 562
S+ SA++LAFGSLF++PYKGSE YIDIH++ +D R SL K+ L +VPE+++AGK+F
Sbjct: 264 SKVESASMLAFGSLFSAPYKGSESYIDIHESHQDQRFLSLMEKIKFLPYVPEVMNAGKEF 323
Query: 561 AIEKIKAPFLCTQLRLLDGQFKNHWKSTFLGLEQKLESLRKDGNLPIHIFVMTDLSEANW 382
A IKAPFLC QLRLLDGQFKNH K+TF GL QKL SL + G+LPIHIFVMTDL NW
Sbjct: 324 AKTTIKAPFLCAQLRLLDGQFKNHHKATFDGLRQKLVSLMQKGHLPIHIFVMTDLQRNNW 383
Query: 381 TDSYLGKLLKDSDTYKLHILQEGDELVVQAAKKIANAEYGLRSGSLSRNLNTNKKNKNCR 202
T +YLG L D+ YK+H L+E D+LV+QAAKK+ A YG R N ++ K C
Sbjct: 384 TGTYLGDLTGDAHNYKVHFLREDDQLVMQAAKKLTTAGYGQR---FIPNSDSRIGKKYCS 440
Query: 201 VDILPDILLYVEEAVCSCGKLGFVGTSGSTIAESVELLRKNGVC 70
ILPD+LLYVE+ VCSC LGF+GT GSTIAE++EL+RK G C
Sbjct: 441 NQILPDVLLYVEQTVCSCASLGFIGTPGSTIAENIELMRKFGSC 484