BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013691
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   107   2e-21
emb|CBI27286.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...    95   1e-17
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17

>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  107 bits (266), Expect(2) = 2e-21
 Identities = 47/92 (51%), Positives = 65/92 (70%)
 Frame = +1

Query: 298 HGLITT*EGKSSTEIKGTFNRFNSPNSLINPTQFLRVCTVLYRQQNATIPKLHTHLQNCK 477
           H L+ T   + +     T  +   P S++NP   LRVCTVLY+QQN+   +L THL+ C+
Sbjct: 8   HKLLITLFNQLNVRPLTTLPQLPQPTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACE 67

Query: 478 FNLTHEFFLQVCNKFPYSWKPVYRLFQFSQTE 573
           F+LTHEFFLQVCNKFP SW+PVY+ F+F++T+
Sbjct: 68  FHLTHEFFLQVCNKFPLSWRPVYKFFEFTETQ 99



 Score = 21.2 bits (43), Expect(2) = 2e-21
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 549 TFPVFSN*RTKLNKMVDIFG 608
           T P F +     NKMVD+ G
Sbjct: 98  TQPCFHHNSVTFNKMVDVIG 117


>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  107 bits (266), Expect(2) = 2e-21
 Identities = 47/92 (51%), Positives = 65/92 (70%)
 Frame = +1

Query: 298 HGLITT*EGKSSTEIKGTFNRFNSPNSLINPTQFLRVCTVLYRQQNATIPKLHTHLQNCK 477
           H L+ T   + +     T  +   P S++NP   LRVCTVLY+QQN+   +L THL+ C+
Sbjct: 6   HKLLITLFNQLNVRPLTTLPQLPQPTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACE 65

Query: 478 FNLTHEFFLQVCNKFPYSWKPVYRLFQFSQTE 573
           F+LTHEFFLQVCNKFP SW+PVY+ F+F++T+
Sbjct: 66  FHLTHEFFLQVCNKFPLSWRPVYKFFEFTETQ 97



 Score = 21.2 bits (43), Expect(2) = 2e-21
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 549 TFPVFSN*RTKLNKMVDIFG 608
           T P F +     NKMVD+ G
Sbjct: 96  TQPCFHHNSVTFNKMVDVIG 115


>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +1

Query: 367 SPNSLINPTQFLRVCTVLYRQQNATIPKLHTHLQNCKFNLTHEFFLQVCNKFPYSWKPVY 546
           +P + +N  + L+VCT+LY+QQN+   +LH+ L +  FNLTHEFFLQVCN FPYSW+PVY
Sbjct: 27  NPITPVNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRPVY 86

Query: 547 RLFQFSQTEEQN 582
           R F F+Q E+ +
Sbjct: 87  RFFLFTQQEKNS 98


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 40/65 (61%), Positives = 52/65 (80%)
 Frame = +1

Query: 376 SLINPTQFLRVCTVLYRQQNATIPKLHTHLQNCKFNLTHEFFLQVCNKFPYSWKPVYRLF 555
           S +NP   LRVCT+LY+QQN+  P+L + L + +F LTHEFFLQVCNKFPYSW+PVYR F
Sbjct: 29  SPVNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYSWRPVYRFF 88

Query: 556 QFSQT 570
            ++Q+
Sbjct: 89  LYTQS 93


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 42/63 (66%), Positives = 49/63 (77%)
 Frame = +1

Query: 382 INPTQFLRVCTVLYRQQNATIPKLHTHLQNCKFNLTHEFFLQVCNKFPYSWKPVYRLFQF 561
           I+ T   RVCTVLY+QQN+   KLHT L  C FNL+HEFFLQVCN FP SW+PVYR FQF
Sbjct: 42  IDSTHLRRVCTVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRFFQF 101

Query: 562 SQT 570
           ++T
Sbjct: 102 TET 104