BLASTX nr result

ID: Coptis23_contig00013684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013684
         (1947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B...   555   e-155
emb|CBI17381.3| unnamed protein product [Vitis vinifera]              555   e-155
ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B...   555   e-155
ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B...   554   e-155
emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]   551   e-154

>ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  555 bits (1431), Expect = e-155
 Identities = 269/331 (81%), Positives = 295/331 (89%)
 Frame = +3

Query: 606  GGRESEIEEKVSFELTDEIIKSIEAGMDLRDHTGPISSMDFHKASGYLVTASDDASIRLY 785
            GG +SE EEKVS ELT+EI++S+E GM  RD+ G ISSMDFHK S YLVTASDD SIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRLY 61

Query: 786  DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 965
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 966  DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 1145
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 1146 GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFHGTLL 1325
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSF GTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 1326 STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKW 1505
            STYNVKP+S N TLEASFSPEGMF          Y W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 1506 APGCLMFATGSSELSFWVPDLSKLGSFVGAK 1598
            APG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>emb|CBI17381.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  555 bits (1431), Expect = e-155
 Identities = 271/335 (80%), Positives = 293/335 (87%)
 Frame = +3

Query: 594  EMMPGGRESEIEEKVSFELTDEIIKSIEAGMDLRDHTGPISSMDFHKASGYLVTASDDAS 773
            +M  G  +SE E+KV+ ELT+EI +S+E GM  RD++G ISSMDFH+ S YLVTASDD S
Sbjct: 188  QMAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDES 247

Query: 774  IRLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 953
            IRLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYF
Sbjct: 248  IRLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 307

Query: 954  KGHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFT 1133
            KGHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF 
Sbjct: 308  KGHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFA 367

Query: 1134 IAFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFH 1313
            IAFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSF 
Sbjct: 368  IAFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFR 427

Query: 1314 GTLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPP 1493
            GTLLSTYNVKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMSTE EPP
Sbjct: 428  GTLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPP 487

Query: 1494 VIKWAPGCLMFATGSSELSFWVPDLSKLGSFVGAK 1598
            VIKWAPG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 488  VIKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 522


>ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 334

 Score =  555 bits (1430), Expect = e-155
 Identities = 272/334 (81%), Positives = 294/334 (88%), Gaps = 1/334 (0%)
 Frame = +3

Query: 600  MPGGR-ESEIEEKVSFELTDEIIKSIEAGMDLRDHTGPISSMDFHKASGYLVTASDDASI 776
            M GG+ +SE E+KV+ ELT+EI +S+E GM  RD++G ISSMDFH+ S YLVTASDD SI
Sbjct: 1    MAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESI 60

Query: 777  RLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 956
            RLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
Sbjct: 61   RLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 120

Query: 957  GHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTI 1136
            GHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF I
Sbjct: 121  GHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAI 180

Query: 1137 AFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFHG 1316
            AFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSF G
Sbjct: 181  AFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG 240

Query: 1317 TLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPV 1496
            TLLSTYNVKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMSTE EPPV
Sbjct: 241  TLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPV 300

Query: 1497 IKWAPGCLMFATGSSELSFWVPDLSKLGSFVGAK 1598
            IKWAPG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 301  IKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 334


>ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  554 bits (1428), Expect = e-155
 Identities = 268/331 (80%), Positives = 295/331 (89%)
 Frame = +3

Query: 606  GGRESEIEEKVSFELTDEIIKSIEAGMDLRDHTGPISSMDFHKASGYLVTASDDASIRLY 785
            GG +SE EEKVS ELT+EI++S+E GM  RD+ G ISSMDFH+ S YLVTASDD SIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRLY 61

Query: 786  DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 965
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 966  DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 1145
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 1146 GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFHGTLL 1325
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSF GTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 1326 STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKW 1505
            STYNVKP+S N TLEASFSPEGMF          Y W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 1506 APGCLMFATGSSELSFWVPDLSKLGSFVGAK 1598
            APG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]
          Length = 328

 Score =  551 bits (1420), Expect = e-154
 Identities = 268/327 (81%), Positives = 289/327 (88%)
 Frame = +3

Query: 618  SEIEEKVSFELTDEIIKSIEAGMDLRDHTGPISSMDFHKASGYLVTASDDASIRLYDVSN 797
            +E E+KV+ ELT+EI +S+E GM  RD++G ISSMDFH+ S YLVTASDD SIRLYDV+ 
Sbjct: 2    AEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESIRLYDVAT 61

Query: 798  AMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 977
              CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV
Sbjct: 62   GTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 121

Query: 978  SLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFGGYVR 1157
            SLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF IAFGGYVR
Sbjct: 122  SLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAIAFGGYVR 181

Query: 1158 MFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFHGTLLSTYN 1337
            +FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSF GTLLSTYN
Sbjct: 182  LFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRGTLLSTYN 241

Query: 1338 VKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKWAPGC 1517
            VKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMSTE EPPVIKWAPG 
Sbjct: 242  VKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPVIKWAPGS 301

Query: 1518 LMFATGSSELSFWVPDLSKLGSFVGAK 1598
            LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 302  LMFVTGSSELSFWIPDLSKLGAYAGRK 328


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