BLASTX nr result

ID: Coptis23_contig00013671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013671
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253...    57   5e-14
ref|XP_002520815.1| conserved hypothetical protein [Ricinus comm...    56   1e-12
ref|XP_002265642.1| PREDICTED: uncharacterized protein LOC100243...    57   4e-12
gb|ABK26779.1| unknown [Picea sitchensis]                              50   6e-12
ref|XP_002334031.1| predicted protein [Populus trichocarpa] gi|2...    51   7e-12

>ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253518 isoform 1 [Vitis
           vinifera] gi|359486360|ref|XP_003633434.1| PREDICTED:
           uncharacterized protein LOC100253518 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score = 57.0 bits (136), Expect(3) = 5e-14
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +3

Query: 381 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTRK 485
           FQDTL+EAK GD++MQ+LVGQMY++ YGVSRD +K
Sbjct: 82  FQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQK 116



 Score = 35.8 bits (81), Expect(3) = 5e-14
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 251 ESFQLCSTSANSKPSNLNMEYTDEQSRVSLSDVVSDYARRWFQ 379
           E+ +L      S+   L ME ++ Q R+ L+ VVSD A+RWFQ
Sbjct: 41  ETTKLRGARLGSERVRLKMESSEGQRRMPLAQVVSDCAKRWFQ 83



 Score = 30.8 bits (68), Expect(3) = 5e-14
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +1

Query: 478 QGRACFTRAWKCRLSY-----KRPGYHASD*DLDELNDKD 582
           +GRA  +RA K R S      K PGY+ASD D D+L + +
Sbjct: 116 KGRAWISRASKSRSSALKVGDKHPGYNASDSDSDDLKNDE 155


>ref|XP_002520815.1| conserved hypothetical protein [Ricinus communis]
           gi|223539946|gb|EEF41524.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score = 55.8 bits (133), Expect(3) = 1e-12
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +3

Query: 381 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTRK 485
           FQDTL+EAK GD SMQ+LVGQMY+N YG+ +D++K
Sbjct: 82  FQDTLKEAKAGDISMQVLVGQMYFNGYGIPKDSQK 116



 Score = 32.0 bits (71), Expect(3) = 1e-12
 Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
 Frame = +1

Query: 478 QGRACFTRAWKCRLSY-----KRPGYHASD*DLDELND 576
           +GRA   RA K R+S      KRPGY ASD D DE  D
Sbjct: 116 KGRAWINRASKSRVSAWKVSDKRPGYAASDSDSDEGKD 153



 Score = 30.8 bits (68), Expect(3) = 1e-12
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 317 DEQSRVSLSDVVSDYARRWFQ 379
           D ++R+ LS+VVSD  RRWFQ
Sbjct: 63  DGKNRLPLSNVVSDCVRRWFQ 83


>ref|XP_002265642.1| PREDICTED: uncharacterized protein LOC100243041 isoform 1 [Vitis
           vinifera] gi|359481191|ref|XP_003632590.1| PREDICTED:
           uncharacterized protein LOC100243041 [Vitis vinifera]
          Length = 100

 Score = 57.4 bits (137), Expect(3) = 4e-12
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +3

Query: 381 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTRKSLLY 497
           FQDTL EAK GD SMQ+LVGQMYY+ YGV RD +K  ++
Sbjct: 27  FQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQKGRVW 65



 Score = 30.8 bits (68), Expect(3) = 4e-12
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 484 RACFTRAWKCRLSYKRPGYHASD*DLDEL 570
           RA  TR+   ++S K PGY+ASD D DEL
Sbjct: 68  RASRTRSSVWKVSDKHPGYNASDSDSDEL 96



 Score = 28.9 bits (63), Expect(3) = 4e-12
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 329 RVSLSDVVSDYARRWFQ 379
           RV LS+VVSD  +RWFQ
Sbjct: 12  RVPLSEVVSDCVKRWFQ 28


>gb|ABK26779.1| unknown [Picea sitchensis]
          Length = 144

 Score = 49.7 bits (117), Expect(3) = 6e-12
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +3

Query: 381 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTRK 485
           FQD+L+EAK GD+ MQ+LVGQMY + YGV RD ++
Sbjct: 70  FQDSLKEAKAGDTGMQVLVGQMYCSGYGVHRDIQR 104



 Score = 37.0 bits (84), Expect(3) = 6e-12
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 296 NLNMEYTDEQSRVSLSDVVSDYARRWFQ 379
           N+ M+  +EQ+R+ L +VV+D ARRWFQ
Sbjct: 44  NMKMQSGEEQNRLPLKEVVADCARRWFQ 71



 Score = 29.6 bits (65), Expect(3) = 6e-12
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = +1

Query: 478 QGRACFTRAWKCR-----LSYKRPGYHASD*DLDELND 576
           +G+A F +A K R     L  KRPGY+AS+ D D+  D
Sbjct: 104 RGKAWFQKAAKSRSRVLNLVAKRPGYNASESDSDDQKD 141


>ref|XP_002334031.1| predicted protein [Populus trichocarpa] gi|222839657|gb|EEE77980.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 50.8 bits (120), Expect(3) = 7e-12
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +3

Query: 381 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTRKSLLY 497
           F+DTL+EAK GD +MQ+LV QMYY+ YGV +D +K  ++
Sbjct: 38  FKDTLKEAKAGDINMQVLVSQMYYSGYGVPKDEQKGRIW 76



 Score = 33.5 bits (75), Expect(3) = 7e-12
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 484 RACFTRAWKCRLSYKRPGYHASD*DLD 564
           RA  TR+W  ++S K+PGY+ASD D D
Sbjct: 79  RASRTRSWVWKVSNKQPGYNASDSDSD 105



 Score = 32.0 bits (71), Expect(3) = 7e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 269 STSANSKPSNLNMEYTDEQSRVSLSDVVSDYARRWFQ 379
           ++S   K S+ N       +RV LSDVVSD  +RWF+
Sbjct: 3   NSSGLDKSSSNNGTGNSNNTRVPLSDVVSDCIKRWFK 39


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