BLASTX nr result

ID: Coptis23_contig00013658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013658
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24427.3| unnamed protein product [Vitis vinifera]               91   8e-17
ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252...    91   8e-17
ref|XP_003540817.1| PREDICTED: uncharacterized protein LOC100786...    84   1e-14
gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]      82   4e-14
ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787...    80   1e-13

>emb|CBI24427.3| unnamed protein product [Vitis vinifera]
          Length = 842

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3    TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182
            TILKGVME RN+K+W RFTVEANRDVTRMEIF+SLVHLLEQ +K ++ ++ G D +    
Sbjct: 763  TILKGVMETRNDKIWARFTVEANRDVTRMEIFISLVHLLEQTVKGSTLSAHGIDND---- 818

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYH-PASVPVTGRSVSLQ 317
                                   MM H+++H  AS+P TGR+ S Q
Sbjct: 819  ----------------------NMMVHHSFHQAASIPATGRASSFQ 842


>ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252988 [Vitis vinifera]
          Length = 973

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3    TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182
            TILKGVME RN+K+W RFTVEANRDVTRMEIF+SLVHLLEQ +K ++ ++ G D +    
Sbjct: 894  TILKGVMETRNDKIWARFTVEANRDVTRMEIFISLVHLLEQTVKGSTLSAHGIDND---- 949

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYH-PASVPVTGRSVSLQ 317
                                   MM H+++H  AS+P TGR+ S Q
Sbjct: 950  ----------------------NMMVHHSFHQAASIPATGRASSFQ 973


>ref|XP_003540817.1| PREDICTED: uncharacterized protein LOC100786351 [Glycine max]
          Length = 957

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/105 (45%), Positives = 57/105 (54%)
 Frame = +3

Query: 3    TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182
            TILKGVMEARN+K+W RF VEANRDVTRMEIF+SLV LL+Q MK  + +S   D N    
Sbjct: 879  TILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTMKGGASSSNAIDNN---- 934

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYHPASVPVTGRSVSLQ 317
                                   M+ H+      +P TGR  SLQ
Sbjct: 935  ----------------------MMLYHSFPQATQIPATGRPSSLQ 957


>gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 589

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +3

Query: 3   TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDT 167
           TILKGVMEA N+K+W RF VEANRDVTRMEIF+SLV LLEQ MK N+ +S   DT
Sbjct: 524 TILKGVMEAHNDKIWARFIVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDT 578


>ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787748 [Glycine max]
          Length = 936

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/105 (44%), Positives = 57/105 (54%)
 Frame = +3

Query: 3    TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182
            TILKGVMEA N+K+W RF VEANRD+TRMEIF+SLV LLE+ +K N+  S   D      
Sbjct: 860  TILKGVMEAHNDKIWARFAVEANRDLTRMEIFMSLVRLLEKTVKGNTSPSNAIDN----- 914

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYHPASVPVTGRSVSLQ 317
                                   M+ H+    A +PVTGR  SLQ
Sbjct: 915  -----------------------MVYHSFPQAAQIPVTGRPSSLQ 936


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