BLASTX nr result
ID: Coptis23_contig00013658
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00013658 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24427.3| unnamed protein product [Vitis vinifera] 91 8e-17 ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252... 91 8e-17 ref|XP_003540817.1| PREDICTED: uncharacterized protein LOC100786... 84 1e-14 gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula] 82 4e-14 ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787... 80 1e-13 >emb|CBI24427.3| unnamed protein product [Vitis vinifera] Length = 842 Score = 91.3 bits (225), Expect = 8e-17 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Frame = +3 Query: 3 TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182 TILKGVME RN+K+W RFTVEANRDVTRMEIF+SLVHLLEQ +K ++ ++ G D + Sbjct: 763 TILKGVMETRNDKIWARFTVEANRDVTRMEIFISLVHLLEQTVKGSTLSAHGIDND---- 818 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYH-PASVPVTGRSVSLQ 317 MM H+++H AS+P TGR+ S Q Sbjct: 819 ----------------------NMMVHHSFHQAASIPATGRASSFQ 842 >ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252988 [Vitis vinifera] Length = 973 Score = 91.3 bits (225), Expect = 8e-17 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Frame = +3 Query: 3 TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182 TILKGVME RN+K+W RFTVEANRDVTRMEIF+SLVHLLEQ +K ++ ++ G D + Sbjct: 894 TILKGVMETRNDKIWARFTVEANRDVTRMEIFISLVHLLEQTVKGSTLSAHGIDND---- 949 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYH-PASVPVTGRSVSLQ 317 MM H+++H AS+P TGR+ S Q Sbjct: 950 ----------------------NMMVHHSFHQAASIPATGRASSFQ 973 >ref|XP_003540817.1| PREDICTED: uncharacterized protein LOC100786351 [Glycine max] Length = 957 Score = 84.0 bits (206), Expect = 1e-14 Identities = 48/105 (45%), Positives = 57/105 (54%) Frame = +3 Query: 3 TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182 TILKGVMEARN+K+W RF VEANRDVTRMEIF+SLV LL+Q MK + +S D N Sbjct: 879 TILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTMKGGASSSNAIDNN---- 934 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYHPASVPVTGRSVSLQ 317 M+ H+ +P TGR SLQ Sbjct: 935 ----------------------MMLYHSFPQATQIPATGRPSSLQ 957 >gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula] Length = 589 Score = 82.4 bits (202), Expect = 4e-14 Identities = 40/55 (72%), Positives = 45/55 (81%) Frame = +3 Query: 3 TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDT 167 TILKGVMEA N+K+W RF VEANRDVTRMEIF+SLV LLEQ MK N+ +S DT Sbjct: 524 TILKGVMEAHNDKIWARFIVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDT 578 >ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787748 [Glycine max] Length = 936 Score = 80.5 bits (197), Expect = 1e-13 Identities = 47/105 (44%), Positives = 57/105 (54%) Frame = +3 Query: 3 TILKGVMEARNEKVWVRFTVEANRDVTRMEIFLSLVHLLEQAMKCNSEASKGPDTNXXXX 182 TILKGVMEA N+K+W RF VEANRD+TRMEIF+SLV LLE+ +K N+ S D Sbjct: 860 TILKGVMEAHNDKIWARFAVEANRDLTRMEIFMSLVRLLEKTVKGNTSPSNAIDN----- 914 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXMMAHNTYHPASVPVTGRSVSLQ 317 M+ H+ A +PVTGR SLQ Sbjct: 915 -----------------------MVYHSFPQAAQIPVTGRPSSLQ 936