BLASTX nr result
ID: Coptis23_contig00013657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013657
(482 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK00037.1| predicted protein [Hordeum vulgare subsp. vulgare] 146 4e-54
ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Viti... 135 3e-53
ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago trunca... 140 7e-53
ref|NP_001065512.1| Os10g0580300 [Oryza sativa Japonica Group] g... 144 1e-52
gb|AAP55188.2| Protein kinase domain containing protein, express... 144 1e-52
>dbj|BAK00037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 146 bits (369), Expect(2) = 4e-54
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = -1
Query: 227 VSPTAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNLS 48
VSPTAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYE+IRHHREK+NLS
Sbjct: 66 VSPTAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEVIRHHREKLNLS 125
Query: 47 INHYTVKSLLWQLLN 3
IN YTVKSLLWQLLN
Sbjct: 126 INQYTVKSLLWQLLN 140
Score = 90.1 bits (222), Expect(2) = 4e-54
Identities = 43/60 (71%), Positives = 49/60 (81%), Gaps = 7/60 (11%)
Frame = -3
Query: 477 GGGSNRPVWLQQYDLIGKIGEGTYGLVFLAKIK-------SQRGKSIAIKKFKQSKDGDG 319
GGGSNRP WLQQY+L+GKIGEGTYGLVFLA++K +RG IAIKKFKQSK+GDG
Sbjct: 6 GGGSNRPAWLQQYELVGKIGEGTYGLVFLARLKPTHPQAAGRRGSPIAIKKFKQSKEGDG 65
>ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Vitis vinifera]
gi|296082615|emb|CBI21620.3| unnamed protein product
[Vitis vinifera]
Length = 481
Score = 135 bits (340), Expect(2) = 3e-53
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = -1
Query: 227 VSPTAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNLS 48
VSPTAIREIMLLREI+HENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHR+KV
Sbjct: 73 VSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVTNP 132
Query: 47 INHYTVKSLLWQLLN 3
I+ YTVKSLLWQLLN
Sbjct: 133 IHPYTVKSLLWQLLN 147
Score = 98.2 bits (243), Expect(2) = 3e-53
Identities = 48/56 (85%), Positives = 50/56 (89%), Gaps = 2/56 (3%)
Frame = -3
Query: 480 GGGGSNRPVWLQQYDLIGKIGEGTYGLVFLAKIK--SQRGKSIAIKKFKQSKDGDG 319
GG GSN+P WLQQYDLIGKIGEGTYGLVFLA+ K S RGKSIAIKKFKQSKDGDG
Sbjct: 17 GGSGSNKPAWLQQYDLIGKIGEGTYGLVFLARTKSPSNRGKSIAIKKFKQSKDGDG 72
>ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago truncatula]
gi|355491736|gb|AES72939.1| Cyclin-dependent kinase E-1
[Medicago truncatula]
Length = 474
Score = 140 bits (352), Expect(2) = 7e-53
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -1
Query: 227 VSPTAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNLS 48
VSPTAIREIMLLREI HENVVKLVNVHIN DMSLYLAFDYAEHDLYEIIRHHR+KVN S
Sbjct: 61 VSPTAIREIMLLREITHENVVKLVNVHINHTDMSLYLAFDYAEHDLYEIIRHHRDKVNQS 120
Query: 47 INHYTVKSLLWQLLN 3
IN YTVKS+LWQLLN
Sbjct: 121 INQYTVKSILWQLLN 135
Score = 92.4 bits (228), Expect(2) = 7e-53
Identities = 46/52 (88%), Positives = 48/52 (92%), Gaps = 2/52 (3%)
Frame = -3
Query: 468 SNRPVWLQQYDLIGKIGEGTYGLVFLAKIKS--QRGKSIAIKKFKQSKDGDG 319
SN+P WLQQYDLIGKIGEGTYGLVFLA+IKS RGKSIAIKKFKQSKDGDG
Sbjct: 9 SNKPEWLQQYDLIGKIGEGTYGLVFLARIKSTTNRGKSIAIKKFKQSKDGDG 60
>ref|NP_001065512.1| Os10g0580300 [Oryza sativa Japonica Group]
gi|122248970|sp|Q336M2.2|CDKE1_ORYSJ RecName:
Full=Cyclin-dependent kinase E-1; Short=CDKE;1
gi|12039378|gb|AAG46164.1|AC018727_16 putative
serine/threonine kinase [Oryza sativa Japonica Group]
gi|110289665|gb|ABB48043.2| Protein kinase domain
containing protein, expressed [Oryza sativa Japonica
Group] gi|113640044|dbj|BAF27349.1| Os10g0580300 [Oryza
sativa Japonica Group] gi|215694950|dbj|BAG90141.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222613340|gb|EEE51472.1| hypothetical protein
OsJ_32608 [Oryza sativa Japonica Group]
Length = 475
Score = 144 bits (363), Expect(2) = 1e-52
Identities = 71/75 (94%), Positives = 72/75 (96%)
Frame = -1
Query: 227 VSPTAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNLS 48
VSPTAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHREK+NL
Sbjct: 70 VSPTAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKLNLP 129
Query: 47 INHYTVKSLLWQLLN 3
IN YTVKSLLWQLLN
Sbjct: 130 INPYTVKSLLWQLLN 144
Score = 87.8 bits (216), Expect(2) = 1e-52
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 10/63 (15%)
Frame = -3
Query: 477 GGGSNRPVWLQQYDLIGKIGEGTYGLVFLAKIK----------SQRGKSIAIKKFKQSKD 328
GGG+NRP WLQQY+L+GKIGEGTYGLVFLA++K +RG IAIKKFKQSK+
Sbjct: 7 GGGTNRPAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKE 66
Query: 327 GDG 319
GDG
Sbjct: 67 GDG 69
>gb|AAP55188.2| Protein kinase domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 422
Score = 144 bits (363), Expect(2) = 1e-52
Identities = 71/75 (94%), Positives = 72/75 (96%)
Frame = -1
Query: 227 VSPTAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNLS 48
VSPTAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHREK+NL
Sbjct: 70 VSPTAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKLNLP 129
Query: 47 INHYTVKSLLWQLLN 3
IN YTVKSLLWQLLN
Sbjct: 130 INPYTVKSLLWQLLN 144
Score = 87.8 bits (216), Expect(2) = 1e-52
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 10/63 (15%)
Frame = -3
Query: 477 GGGSNRPVWLQQYDLIGKIGEGTYGLVFLAKIK----------SQRGKSIAIKKFKQSKD 328
GGG+NRP WLQQY+L+GKIGEGTYGLVFLA++K +RG IAIKKFKQSK+
Sbjct: 7 GGGTNRPAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKE 66
Query: 327 GDG 319
GDG
Sbjct: 67 GDG 69