BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013636
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp....   168   5e-40
ref|NP_190452.1| polynucleotide adenylyltransferase domain and R...   159   3e-37
ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera...   157   9e-37
ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus commun...   152   4e-35

>ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321766|gb|EFH52187.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/109 (75%), Positives = 92/109 (84%)
 Frame = -3

Query: 405 EEDGLVKGKEGVIKGINWKKLSAKELGITSDKISKPTRLVLNALKKKGYEVYLVGGCVRD 226
           + D L KG +   K   WKKL++K+LGITS  ISKPTRLVLN LK KGY+VYLVGGCVRD
Sbjct: 43  DSDHLEKGSDRTSKAPEWKKLNSKDLGITSSMISKPTRLVLNGLKSKGYDVYLVGGCVRD 102

Query: 225 LILNRTPKDFDILTSAELRDVVRTFSQCEIVGKRFPICHVHVSHIIIEV 79
           LIL RTPKDFDILTSAELR+VVRTFS+CEIVGKRFPICHVHV + +IEV
Sbjct: 103 LILKRTPKDFDILTSAELREVVRTFSRCEIVGKRFPICHVHVGNEMIEV 151


>ref|NP_190452.1| polynucleotide adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|7576221|emb|CAB87911.1| putative protein [Arabidopsis
           thaliana] gi|332644940|gb|AEE78461.1| polynucleotide
           adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 881

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/103 (71%), Positives = 88/103 (85%)
 Frame = -3

Query: 387 KGKEGVIKGINWKKLSAKELGITSDKISKPTRLVLNALKKKGYEVYLVGGCVRDLILNRT 208
           KG     K   WKKL++K+LGIT+  ISKPTR+VLN LK KGY+VYLVGGCVRDLIL RT
Sbjct: 50  KGSNKTSKAPEWKKLNSKDLGITTSMISKPTRIVLNGLKSKGYDVYLVGGCVRDLILKRT 109

Query: 207 PKDFDILTSAELRDVVRTFSQCEIVGKRFPICHVHVSHIIIEV 79
           PKDFDILTSAELR+VVR+FS+CEI+GK+FPICHVH+ + +IEV
Sbjct: 110 PKDFDILTSAELREVVRSFSRCEIIGKKFPICHVHIGNDMIEV 152


>ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
           gi|296088167|emb|CBI35659.3| unnamed protein product
           [Vitis vinifera]
          Length = 537

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/125 (60%), Positives = 90/125 (72%)
 Frame = -3

Query: 375 GVIKGINWKKLSAKELGITSDKISKPTRLVLNALKKKGYEVYLVGGCVRDLILNRTPKDF 196
           G  K   WKKL++K+LGI +  I+KPTR VLN LKKKGYEVYLVGGCVRDLIL RTPKDF
Sbjct: 62  GASKAPEWKKLNSKDLGIRTSMIAKPTRYVLNGLKKKGYEVYLVGGCVRDLILKRTPKDF 121

Query: 195 DILTSAELRDVVRTFSQCEIVGKRFPICHVHVSHIIIEVXXXXXXXXXXXXXXXXXXXRP 16
           DI+TSAEL++V+R F +CE+VGKRFPICHVHV+  I+EV                   RP
Sbjct: 122 DIITSAELKEVLRAFPRCEVVGKRFPICHVHVNDTIVEVSSFSTSGKRTGRKLDYILRRP 181

Query: 15  PGCDE 1
           P CD+
Sbjct: 182 PDCDD 186


>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/137 (56%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
 Frame = -3

Query: 402 EDGLVKGKE---GVIKGINWKKLSAKELGITSDKISKPTRLVLNALKKKGYEVYLVGGCV 232
           ++ ++KG     G  K   WKKLS+KELG+++  IS PT+ VLN LKK GYEVYLVGGCV
Sbjct: 41  QENVIKGNSRNLGDCKAPEWKKLSSKELGLSNSLISMPTKKVLNGLKKNGYEVYLVGGCV 100

Query: 231 RDLILNRTPKDFDILTSAELRDVVRTFSQCEIVGKRFPICHVHVSHIIIEVXXXXXXXXX 52
           RDLIL R PKDFDI+TSAEL++VVRTFS CEIVGK FPICHVHV   I+EV         
Sbjct: 101 RDLILKRIPKDFDIITSAELKEVVRTFSHCEIVGKWFPICHVHVGDTIVEVSSFSTTGRK 160

Query: 51  XXXXXXXXXXRPPGCDE 1
                      P  CDE
Sbjct: 161 FKVDLRNDIICPIDCDE 177


>ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 524

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/130 (56%), Positives = 90/130 (69%)
 Frame = -3

Query: 390 VKGKEGVIKGINWKKLSAKELGITSDKISKPTRLVLNALKKKGYEVYLVGGCVRDLILNR 211
           V+ +EG   G  WKKL++KELGIT+  I+ PTR +LN LK++GYEVYLVGGCVRDLIL R
Sbjct: 55  VELREGDCNGPKWKKLNSKELGITNSMIASPTRKILNGLKQRGYEVYLVGGCVRDLILKR 114

Query: 210 TPKDFDILTSAELRDVVRTFSQCEIVGKRFPICHVHVSHIIIEVXXXXXXXXXXXXXXXX 31
            PKDFDI+TSAELR+V R FS+CEIVG+RFPICHV+V   ++EV                
Sbjct: 115 IPKDFDIITSAELREVARAFSRCEIVGRRFPICHVYVGDTVVEVSSFSTTGQKFGGDWNY 174

Query: 30  XXXRPPGCDE 1
               P  CDE
Sbjct: 175 DTQSPIDCDE 184