BLASTX nr result
ID: Coptis23_contig00013635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013635
(1589 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated... 520 e-145
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated... 491 e-136
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated... 486 e-135
ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,... 482 e-133
ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arab... 477 e-132
>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Vitis
vinifera] gi|302144122|emb|CBI23227.3| unnamed protein
product [Vitis vinifera]
Length = 652
Score = 520 bits (1340), Expect = e-145
Identities = 263/467 (56%), Positives = 352/467 (75%), Gaps = 5/467 (1%)
Frame = -2
Query: 1588 EYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTNADGS 1409
EYLRMEL YLNKLKARK LGED+G L D++D+D+++W +ENKDLFM+LDE + + D S
Sbjct: 184 EYLRMELTYLNKLKARKVALGEDEGTLINDHRDADEKQWREENKDLFMSLDEERGSRDVS 243
Query: 1408 D---EESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLADSDNLRE 1238
+ EES+ K D+F+E I++T+YSGAVEA+PS +LR +F E+L ++LA S +++
Sbjct: 244 NRQNEESKKKSDMFQEQGLSILRTIYSGAVEAIPSRFSLRTQFFEILEAINLAGSKEMQK 303
Query: 1237 EILNGMRKDFAKFPEYWDWLSRLQIFDNMKTKKMTMEELHPELDKAVGIYEEALKYVPSA 1058
EIL+ M++DF+ PEYWDWL+RL+ D+ T++ + + + L KAV +YEEALK++PSA
Sbjct: 304 EILSDMKRDFSAEPEYWDWLARLETIDSEITQERSTDIVPSRLQKAVQVYEEALKFLPSA 363
Query: 1057 KMLSLYAKFWMDVISAEGDDSQISGSAPSSNFAVEFLSDLLKVYEKAESMGCMTEDLAYQ 878
M +LY KF MD I + + ++ S +S V LS LL VYEKAE+MGC+TEDLA Q
Sbjct: 364 VMFNLYTKFLMDAIVSR-EKTKNSEPFSTSEHTVGSLSHLLMVYEKAENMGCLTEDLACQ 422
Query: 877 YISLYLRVGRLEEARTMAGRLCDGKLSGAAKLWILRISIEMKWITSKSSSLAKDELPSTF 698
++SLYL++G+L+EAR +A + C+GK SGA LW+LR+S+EMK++T K S +K +L S F
Sbjct: 423 HVSLYLQLGKLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCPSPSKADLLSIF 482
Query: 697 ELFRNALEKVSVSEGDNLWHMVIKFFSNHRAYMDKLV*IFMALIAKD--TEGGFSVSSAL 524
EL RN L KV++SE + LW M +KFFSNH+ + DKLV I + +AKD +E GF +SSA+
Sbjct: 483 ELLRNILTKVAISEAEGLWLMALKFFSNHKHFFDKLVDISLVSLAKDGGSENGFCLSSAI 542
Query: 523 VNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKDGLVNARKLYESA 344
VNF LQ+DGIQ AREMYKRFL LP P L +++ CIELE NLA I DKD LVNARKL+ESA
Sbjct: 543 VNFVLQKDGIQSAREMYKRFLALPRPGLPMYKICIELELNLAAINDKDCLVNARKLFESA 602
Query: 343 LTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKSLKDSSRLIDP 203
LTTY QD+ LW+DYYS+E K+GTSETA V+WRARK LKD++ LI P
Sbjct: 603 LTTYDQDINLWQDYYSMEIKMGTSETAAAVHWRARKKLKDAAALIGP 649
>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
[Glycine max]
Length = 649
Score = 491 bits (1265), Expect = e-136
Identities = 255/471 (54%), Positives = 344/471 (73%), Gaps = 7/471 (1%)
Frame = -2
Query: 1588 EYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMAL-----DEGKT 1424
EYLRMEL YLNKLKARK LGED+G LTRD + SD++ W DEN +LFM L D+G
Sbjct: 188 EYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGKRGDDDGGA 247
Query: 1423 NADGSDEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLADSDNL 1244
N GSDE SE K ++F EH I QTVYSGAVEA+PSS++LRKR E+L +L+ +++
Sbjct: 248 NV-GSDE-SEKKQELFEEHGMNIFQTVYSGAVEAVPSSLSLRKRLFEILEGTNLSHYEDM 305
Query: 1243 REEILNGMRKDFAKFPEYWDWLSRLQIFDNMKTKKMTMEELHPELDKAVGIYEEALKYVP 1064
+EILN M++DF+ PE+WDWL+R + +++ E + P+++KAV +YEEALK VP
Sbjct: 306 CKEILNDMKRDFSTQPEFWDWLARHEC-----DLEISEEGIIPQVEKAVQVYEEALKNVP 360
Query: 1063 SAKMLSLYAKFWMDVISAEGDDSQISGSAPSSNFAVEFLSDLLKVYEKAESMGCMTEDLA 884
S M SLYA F D+I+ + ++ I+GS S AV ++S LL +YE+AESMGC+TEDLA
Sbjct: 361 SGTMFSLYANFLTDIIAPKEGETDINGS---SGCAVNYISHLLSIYERAESMGCITEDLA 417
Query: 883 YQYISLYLRVGRLEEARTMAGRLCDGKLSGAAKLWILRISIEMKWITSKSSSLAKDELPS 704
+++SL+L++ +L+EA+ +A +LC GKL+ + +LW LRI+IE++ IT SSS + +L S
Sbjct: 418 CKHVSLHLQLRQLDEAQKLAAKLCSGKLAESVELWGLRITIEIRCITGSSSSPSDADLQS 477
Query: 703 TFELFRNALEKVSVSEGDNLWHMVIKFFSNHRAYMDKLV*IFMALIAKD--TEGGFSVSS 530
FEL + L KVSVS +NLW +KF++N R Y DKLV I + + +D +E GFS+SS
Sbjct: 478 LFELLQQILMKVSVSRSENLWLKALKFYANQRRYFDKLVEISVVTLVRDGGSENGFSLSS 537
Query: 529 ALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKDGLVNARKLYE 350
A+V+F LQ+DGIQ+ R++YKRFL LP P LAL+R CI+LE+NLA IGDKDGL+NARKLYE
Sbjct: 538 AIVSFILQKDGIQKTRDIYKRFLALPLPGLALYRRCIDLETNLASIGDKDGLINARKLYE 597
Query: 349 SALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKSLKDSSRLIDPRD 197
S+L TY Q+V LW+DYY LE K+GTSE A +YWRARK LKD+S + D
Sbjct: 598 SSLATYDQNVSLWQDYYRLEIKMGTSEKATAIYWRARKVLKDASEFVTAPD 648
>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
[Glycine max]
Length = 655
Score = 486 bits (1250), Expect = e-135
Identities = 249/473 (52%), Positives = 344/473 (72%), Gaps = 9/473 (1%)
Frame = -2
Query: 1588 EYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTNADGS 1409
EYLRMEL YLNKLKARK LGED+G LTRD + SD++ W DEN +LFM L E + + DG
Sbjct: 188 EYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGE-RGDGDGD 246
Query: 1408 DE-------ESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLADSD 1250
D+ ESE K ++F E I QTVY GAVEA+PSS++LRKRF E+L +L+ +
Sbjct: 247 DDRANVGSDESEKKQELFEERGMNIFQTVYGGAVEAVPSSLSLRKRFFEILEGTNLSHYE 306
Query: 1249 NLREEILNGMRKDFAKFPEYWDWLSRLQIFDNMKTKKMTMEELHPELDKAVGIYEEALKY 1070
++ +EILN M++DF+ PE+WDWL+R + D +++ E + P+++KAV +YEEAL+
Sbjct: 307 DMCKEILNDMKRDFSTQPEFWDWLARHEC-DLENDLEISEEGIIPQVEKAVQVYEEALEN 365
Query: 1069 VPSAKMLSLYAKFWMDVISAEGDDSQISGSAPSSNFAVEFLSDLLKVYEKAESMGCMTED 890
VPS M LYA F D+++ + ++ I+GS S A ++S LL +YE+AESMGC+TED
Sbjct: 366 VPSGTMFCLYANFLTDIVAHKEGETNINGS---SGHAANYISHLLLIYERAESMGCITED 422
Query: 889 LAYQYISLYLRVGRLEEARTMAGRLCDGKLSGAAKLWILRISIEMKWITSKSSSLAKDEL 710
LA +++SL+L++ +L+EAR +A +LC GKL+ + +LW LRI+IE++ T+KSSS + +L
Sbjct: 423 LACKHVSLHLQLRQLDEARKLAAKLCSGKLAESVELWGLRITIEIR-CTTKSSSPSDADL 481
Query: 709 PSTFELFRNALEKVSVSEGDNLWHMVIKFFSNHRAYMDKLV*IFMALIAKD--TEGGFSV 536
S FEL + L KVSVS+ +NLW +KF++N R Y DKLV I + + +D +E GFS+
Sbjct: 482 QSLFELLQQILMKVSVSKSENLWLKALKFYANQRQYFDKLVEISVVTLVRDGGSENGFSL 541
Query: 535 SSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKDGLVNARKL 356
S A+V+F Q+DGIQ+ R++YKRFL LP P LAL+R+CI+LE+NLA IGDKDGL+NARKL
Sbjct: 542 SFAIVSFIFQKDGIQKTRDIYKRFLALPRPGLALYRHCIDLETNLASIGDKDGLINARKL 601
Query: 355 YESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKSLKDSSRLIDPRD 197
YESAL TY Q+V LW+DYY +E K+GTSE AN +YWRARK LKD+S + D
Sbjct: 602 YESALATYDQNVSLWQDYYRMETKMGTSEKANAIYWRARKVLKDASEFVTATD 654
>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
communis] gi|223542303|gb|EEF43845.1| hepatocellular
carcinoma-associated antigen, putative [Ricinus communis]
Length = 652
Score = 482 bits (1241), Expect = e-133
Identities = 248/466 (53%), Positives = 333/466 (71%), Gaps = 2/466 (0%)
Frame = -2
Query: 1588 EYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTNADGS 1409
EYLRMEL YLNKLKARK LGED G L RD++D+D++ W DEN +FM+LDE + N +G
Sbjct: 188 EYLRMELTYLNKLKARKVALGEDTGTLLRDHRDADEQHWRDENNGMFMSLDEERGNNNGI 247
Query: 1408 DEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLADSDNLREEIL 1229
+ E+K D+FRE I+QT+YSGA+EALPSS LRKR E+ +LA S+++R ++L
Sbjct: 248 NVSVEDKADLFREQGLNILQTIYSGAIEALPSSFGLRKRLFEIFEATELAHSEDMRNQLL 307
Query: 1228 NGMRKDFAKFPEYWDWLSRLQIFDNMKTKKMTMEELHPELDKAVGIYEEALKYVPSAKML 1049
N M++DF+ EYWDWL+RL++ D++ ++MT + P+L KAV +YEEAL++V S M
Sbjct: 308 NDMKRDFSSDSEYWDWLARLELTDSISMQEMTEGSMPPQLQKAVQVYEEALQFVSSPTMF 367
Query: 1048 SLYAKFWMDVISAEGDDSQISGSAPSSNFAVEFLSDLLKVYEKAESMGCMTEDLAYQYIS 869
SLYAKF MDVI+ + +D+Q+SG A + LS LL +++KAE GC++ED A +Y+S
Sbjct: 368 SLYAKFLMDVIAPKREDNQLSGPASHTKHQ---LSHLLTIFKKAEISGCISEDFACEYVS 424
Query: 868 LYLRVGRLEEARTMAGRLCDGKLSGAAKLWILRISIEMKWITSKSSSLAKDELPSTFELF 689
YL++GRL+EAR +A C GKLS + KL +LR SIE++ T+ + +L S F L
Sbjct: 425 FYLQLGRLDEARKLAENFCSGKLSDSVKLLLLRASIEIRIFTNNIPRPSDIDLQSIFGLL 484
Query: 688 RNALEKVSVSEGDNLWHMVIKFFSNHRAYMDKLV*IFMALIAKDTEG--GFSVSSALVNF 515
+NAL KVS+S+ + LW M IK F+ + Y ++LV + +AKD G GFS+ SA+VN
Sbjct: 485 KNALTKVSISQAEELWVMAIKLFAVEKHYFEQLVEMSFISVAKDGGGDHGFSLPSAIVNC 544
Query: 514 TLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKDGLVNARKLYESALTT 335
LQ++GIQ ARE YKRFL LP P LAL R CIELE NLA I DK+ L NARKLYESAL T
Sbjct: 545 VLQKNGIQFARETYKRFLALPRPGLALLRTCIELEENLASIHDKECLGNARKLYESALAT 604
Query: 334 YSQDVGLWRDYYSLENKVGTSETANGVYWRARKSLKDSSRLIDPRD 197
+ Q+V LWRDY+++E K+GTSETAN VYWRARK+LK+S+ LI D
Sbjct: 605 HDQNVRLWRDYHAMEIKLGTSETANAVYWRARKTLKNSASLITSPD 650
>ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arabidopsis lyrata subsp.
lyrata] gi|297313297|gb|EFH43720.1| hypothetical protein
ARALYDRAFT_913702 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 477 bits (1228), Expect = e-132
Identities = 243/473 (51%), Positives = 344/473 (72%), Gaps = 13/473 (2%)
Frame = -2
Query: 1588 EYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTNADGS 1409
EYLRMEL YLNKLKAR+ LGE KG L RD K +DE+W+DENK+LFM+LDE + N
Sbjct: 184 EYLRMELTYLNKLKARRVALGESKGSLVRDTKSVEDEKWKDENKELFMSLDEKEGNEKEE 243
Query: 1408 DEESEN----------KLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLA 1259
D E ++ K+DVFRE S ++QT+YSGAVEALPSS +LRKRFLE+L DLA
Sbjct: 244 DGEEDSNVEDAEDVTEKVDVFREKGSNVLQTIYSGAVEALPSSFDLRKRFLEILEATDLA 303
Query: 1258 DSDNLREEILNGMRKDFAKFPEYWDWLSRLQIFDNMKTKKMTMEELHPELDKAVGIYEEA 1079
SD +R IL+ +++DF K PEYW+WL+R ++ + +K+ +E + ++ KA+ ++EE
Sbjct: 304 HSDEIRNTILSDLKRDFCKEPEYWNWLARHEMSGYI-SKETGLEFSNLQMQKAIQVFEEG 362
Query: 1078 LKYVPSAKMLSLYAKFWMDVIS-AEGDDSQISGSAPSSNFAVEFLSDLLKVYEKAESMGC 902
L+ V S+ M +Y KF M+ I+ + GDD +IS PSSN +++S ++ VY+KA+ GC
Sbjct: 363 LQTVTSSSMFKIYIKFLMEAIAQSNGDDDEIS---PSSNPIGDYISHIINVYQKADETGC 419
Query: 901 MTEDLAYQYISLYLRVGRLEEARTMAGRLCDGKLSGAAKLWILRISIEMKWITSKSSSLA 722
+TE+LA +Y+SLYL++G+ EA+ +A +LC GK +G+AKLW+ R+SIE++ ++ S+ +
Sbjct: 420 LTEELADEYVSLYLKLGKTHEAQKLAEKLCSGKFAGSAKLWLSRVSIEIRSLSGNSTP-S 478
Query: 721 KDELPSTFELFRNALEKVSVSEGDNLWHMVIKFFSNHRAYMDKLV*IFMALIAKD--TEG 548
K +L + FEL NAL KV +SE ++LW M +KFF++ R Y+DKLV + + L K ++
Sbjct: 479 KADLQTVFELLSNALTKVPISESESLWLMALKFFAHQRTYLDKLVEMSILLATKSHGSDH 538
Query: 547 GFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKDGLVN 368
FS+SS +VNF L+ G AR++YKRFL LP PSL L+++CIE+E+NL +GDKDGL N
Sbjct: 539 VFSLSSTVVNFVLETKGGHSARKIYKRFLALPGPSLVLYKDCIEIETNLISVGDKDGLSN 598
Query: 367 ARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKSLKDSSRLI 209
ARKLY+SA+ +YSQDV LW++YY LE K+GTSETANGVYWRARK+LK+S+ I
Sbjct: 599 ARKLYDSAVASYSQDVELWKNYYLLETKMGTSETANGVYWRARKTLKESADFI 651