BLASTX nr result

ID: Coptis23_contig00013633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013633
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   429   e-117
ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   403   e-110
ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800...   387   e-105
ref|XP_002519396.1| conserved hypothetical protein [Ricinus comm...   384   e-104
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103

>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
            vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
            product [Vitis vinifera]
          Length = 320

 Score =  429 bits (1102), Expect = e-117
 Identities = 216/319 (67%), Positives = 239/319 (74%)
 Frame = +2

Query: 212  MVNSPEEESKHNLNAGAHARDDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 391
            M NS EE  K N N+G   R++SEYV LVISN+ R+ E D LQ  +ETR KS IWW KA 
Sbjct: 1    MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 392  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 571
                       V LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 572  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 751
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA+IRLAG
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRLAG 180

Query: 752  EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 931
            EGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYSGRLI 240

Query: 932  RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIS 1111
            RTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  A+ S
Sbjct: 241  RTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-EASTS 298

Query: 1112 GLDSFEIEKLPLERPKHLG 1168
             L SFE+EKLPLERPKHLG
Sbjct: 299  ELSSFEMEKLPLERPKHLG 317


>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein
            slr0305 [Vitis vinifera]
          Length = 324

 Score =  403 bits (1036), Expect = e-110
 Identities = 208/323 (64%), Positives = 233/323 (72%), Gaps = 4/323 (1%)
 Frame = +2

Query: 212  MVNSPEEESKHNLNAGAHARDDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 391
            M NS EE  K N N+G + R++SEYV LVISN+ R+ E D LQ  +ETR KS IWWLKA 
Sbjct: 1    MPNSSEETDKLNTNSGHNVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKAL 60

Query: 392  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 571
                       + LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 572  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIH----QWLKRWPEKAAII 739
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIH    +   RW     +I
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHVSDXELAFRWXXXXXMI 180

Query: 740  RLAGEGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYS 919
            RLAGEGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYS
Sbjct: 181  RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYS 240

Query: 920  GKLIRTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESS 1099
            G+LIRTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  
Sbjct: 241  GRLIRTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-E 298

Query: 1100 AAISGLDSFEIEKLPLERPKHLG 1168
            A+ S L SFE+EKLPLERPKHLG
Sbjct: 299  ASTSELSSFEMEKLPLERPKHLG 321


>ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800730 [Glycine max]
          Length = 312

 Score =  387 bits (993), Expect = e-105
 Identities = 193/306 (63%), Positives = 223/306 (72%)
 Frame = +2

Query: 221  SPEEESKHNLNAGAHARDDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAXXXX 400
            S E+  KH ++ G H R +SEYV L IS++LR+ ET+ LQ  +E+R KS  WW+KA    
Sbjct: 6    SAEDLEKHAIS-GHHVRGNSEYVRLAISDELRVVETEMLQPLAESRMKSFRWWIKALLWC 64

Query: 401  XXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPS 580
                    V LKW  PF  EKVL PI++WEATAFGR                  IPSGPS
Sbjct: 65   FVIVVLGLVILKWGVPFTFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFFIPSGPS 124

Query: 581  MWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAGEGS 760
            MWLAGMIFGYGLGFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+ AA+IRLAGEGS
Sbjct: 125  MWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRLAGEGS 184

Query: 761  WLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLIRTL 940
            W HQF+VVA+FR+SPFPYTIFNYA+VVTNMRFWPY+CGSIAGM+PEAFIYIYSG+LIRTL
Sbjct: 185  WFHQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSIAGMVPEAFIYIYSGRLIRTL 244

Query: 941  ADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAISGLD 1120
            AD +YG H LTTVEI+YN IS             YAKR LNELK  E N E +A++SG  
Sbjct: 245  ADAQYGKHQLTTVEIIYNIISFIVAVVTTIAFTVYAKRTLNELKIAEAN-EEAASVSGSS 303

Query: 1121 SFEIEK 1138
            + E+ K
Sbjct: 304  NLEMGK 309


>ref|XP_002519396.1| conserved hypothetical protein [Ricinus communis]
            gi|223541463|gb|EEF43013.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 327

 Score =  384 bits (987), Expect = e-104
 Identities = 200/331 (60%), Positives = 222/331 (67%), Gaps = 6/331 (1%)
 Frame = +2

Query: 212  MVNSPEEESKHNLNAGAHARDDSEYVSLVISNDLRIGETDFLQAH------SETRNKSLI 373
            M    EE  K   N     R+DSEYV LVI N    G     Q H      + +  KS +
Sbjct: 1    MGEGSEESGKEGANCEGRVREDSEYVRLVIPNASNPGLPQ--QIHILHPQPNPSSTKSFL 58

Query: 374  WWLKAXXXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXX 553
            WW KA               KW  PFL +KVL PILQWEATAFGR               
Sbjct: 59   WWTKALAFSFLVILLLLAFFKWGLPFLFQKVLFPILQWEATAFGRPVLALVLIASLAVFP 118

Query: 554  XXXIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAA 733
               IPSGPSMWLAGMIFGYG+GFVIIMVGTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA
Sbjct: 119  IFLIPSGPSMWLAGMIFGYGMGFVIIMVGTTIGMILPYLIGLLFRDRIHQWLKRWPQKAA 178

Query: 734  IIRLAGEGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYI 913
            +IRLAGEGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+MRFWPY+CGSIAGM+PEAFIYI
Sbjct: 179  MIRLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMVPEAFIYI 238

Query: 914  YSGKLIRTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGE 1093
            YSG+LIRT ADV+YGNHHLTTVEI+YN IS             YAKRAL EL+  E   E
Sbjct: 239  YSGRLIRTFADVKYGNHHLTTVEIIYNVISFIIAIITTVAFTVYAKRALKELEGIETTEE 298

Query: 1094 SSAAISGLDSFEIEKLPLERPKHLGTFTFPL 1186
              A+  G  S+E+ KLPLERP  +G  +F L
Sbjct: 299  VPASHQG--SYEMGKLPLERPAQVGLSSFSL 327


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  381 bits (978), Expect = e-103
 Identities = 193/325 (59%), Positives = 228/325 (70%)
 Frame = +2

Query: 212  MVNSPEEESKHNLNAGAHARDDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 391
            M  +  E  K +     + R+DSEYV LVIS++ R+G+ D  Q  S  R K+ I W+KA 
Sbjct: 1    MAETAVESRKDSGKLEHNVREDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKAL 60

Query: 392  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 571
                       V LKW   FL +KVLLP+++WEATAFGR                  IPS
Sbjct: 61   IWCLVIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPS 120

Query: 572  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 751
            GPSMWLAGMIFGYG+GFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+KA++IRLAG
Sbjct: 121  GPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRLAG 180

Query: 752  EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 931
            EGSW HQF+VVAIFR+SPFPYTIFNYAIVVT+MRFWPY+ GS++GM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFKVVAIFRVSPFPYTIFNYAIVVTSMRFWPYLWGSVSGMVPEAFIYIYSGRLI 240

Query: 932  RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIS 1111
            RT ADV+YGN+HLTTVEI+YN IS             YAKRAL EL++ E   E     S
Sbjct: 241  RTFADVKYGNYHLTTVEIIYNIISFIIAIVTTVAFTIYAKRALKELERAEATEE--VPPS 298

Query: 1112 GLDSFEIEKLPLERPKHLGTFTFPL 1186
              +S E+ KLPLERPK  G  +F L
Sbjct: 299  HQESHEMGKLPLERPKRAGLSSFSL 323


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