BLASTX nr result

ID: Coptis23_contig00013628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013628
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264...   238   2e-60
emb|CBI33696.3| unnamed protein product [Vitis vinifera]              238   2e-60
emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]   236   7e-60
ref|XP_002525267.1| conserved hypothetical protein [Ricinus comm...   218   2e-54
ref|XP_002303400.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51

>ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264215 [Vitis vinifera]
          Length = 1295

 Score =  238 bits (607), Expect = 2e-60
 Identities = 126/323 (39%), Positives = 190/323 (58%), Gaps = 8/323 (2%)
 Frame = -3

Query: 1052 DKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFTSAYLQVIIPTLRKHCHD-ISL 876
            + K + N++KM T VLKF+VDA  +  +  N G  L+FT+ Y+Q  I  +R+H  D +  
Sbjct: 974  EPKRISNVMKMLTAVLKFIVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQF 1032

Query: 875  LHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXLPDAFXXXXXXXXXLVSIESYFGS 696
              +D++GT LCLKSS TY AK                P+A+         ++S+ESY GS
Sbjct: 1033 NDDDLRGTFLCLKSSLTYTAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGS 1092

Query: 695  RNAISLVPAVKPWVSDLILALGSSHIMTASPDNRAPPAAMNNSTSSFLPWLKVLGKLELC 516
              A+ LV A+KPW+ DL+LALG+ HIM  + +          S      W  +L K+EL 
Sbjct: 1093 VYAVRLVTALKPWLPDLVLALGARHIMKQTSEEGTQFTESEQSELQLPSWTSILAKIELD 1152

Query: 515  VISKLDQDEEVS------DFTVFKDIMDMVVLILRRNQKVLDSVGSIFLSGLVMLLERQE 354
             ++ +  +EE          + FK ++ M+ L+LR N  +LD+VG IF++   + LER++
Sbjct: 1153 ELANISPNEEAERVSEPGKLSSFKKLIGMMTLLLRGNSSILDAVGKIFMTASAVALERED 1212

Query: 353  YGLVLGIVHFVCVRLVQHEHGEWEDLQVMLASLQELYPQIENSIKD-STSEDGRQMLDRA 177
            +GL+LG++HFVCV+LV HEH  WE L +MLASL+ +YP+IE  +++ S +E G+Q L +A
Sbjct: 1213 FGLLLGLIHFVCVKLVGHEHRGWEGLDMMLASLEGIYPEIERQVEEPSGNEHGKQKLQKA 1272

Query: 176  MTLLGPVWAKYVFKDGGGSVMEE 108
              LL P+W  Y  +  G S+MEE
Sbjct: 1273 RALLEPIWINYTCESEGPSMMEE 1295


>emb|CBI33696.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score =  238 bits (607), Expect = 2e-60
 Identities = 126/323 (39%), Positives = 190/323 (58%), Gaps = 8/323 (2%)
 Frame = -3

Query: 1052 DKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFTSAYLQVIIPTLRKHCHD-ISL 876
            + K + N++KM T VLKF+VDA  +  +  N G  L+FT+ Y+Q  I  +R+H  D +  
Sbjct: 527  EPKRISNVMKMLTAVLKFIVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQF 585

Query: 875  LHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXLPDAFXXXXXXXXXLVSIESYFGS 696
              +D++GT LCLKSS TY AK                P+A+         ++S+ESY GS
Sbjct: 586  NDDDLRGTFLCLKSSLTYTAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGS 645

Query: 695  RNAISLVPAVKPWVSDLILALGSSHIMTASPDNRAPPAAMNNSTSSFLPWLKVLGKLELC 516
              A+ LV A+KPW+ DL+LALG+ HIM  + +          S      W  +L K+EL 
Sbjct: 646  VYAVRLVTALKPWLPDLVLALGARHIMKQTSEEGTQFTESEQSELQLPSWTSILAKIELD 705

Query: 515  VISKLDQDEEVS------DFTVFKDIMDMVVLILRRNQKVLDSVGSIFLSGLVMLLERQE 354
             ++ +  +EE          + FK ++ M+ L+LR N  +LD+VG IF++   + LER++
Sbjct: 706  ELANISPNEEAERVSEPGKLSSFKKLIGMMTLLLRGNSSILDAVGKIFMTASAVALERED 765

Query: 353  YGLVLGIVHFVCVRLVQHEHGEWEDLQVMLASLQELYPQIENSIKD-STSEDGRQMLDRA 177
            +GL+LG++HFVCV+LV HEH  WE L +MLASL+ +YP+IE  +++ S +E G+Q L +A
Sbjct: 766  FGLLLGLIHFVCVKLVGHEHRGWEGLDMMLASLEGIYPEIERQVEEPSGNEHGKQKLQKA 825

Query: 176  MTLLGPVWAKYVFKDGGGSVMEE 108
              LL P+W  Y  +  G S+MEE
Sbjct: 826  RALLEPIWINYTCESEGPSMMEE 848


>emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]
          Length = 1268

 Score =  236 bits (602), Expect = 7e-60
 Identities = 125/323 (38%), Positives = 190/323 (58%), Gaps = 8/323 (2%)
 Frame = -3

Query: 1052 DKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFTSAYLQVIIPTLRKHCHD-ISL 876
            + K + N++KM T VLKF+VDA  +  +  N G  L+FT+ Y+Q  I  +R+H  D +  
Sbjct: 947  EPKRISNVMKMLTAVLKFIVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQF 1005

Query: 875  LHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXLPDAFXXXXXXXXXLVSIESYFGS 696
              +D++GT LCLKSS TY AK                P+A+         ++S+ESY GS
Sbjct: 1006 NDDDLRGTFLCLKSSLTYTAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGS 1065

Query: 695  RNAISLVPAVKPWVSDLILALGSSHIMTASPDNRAPPAAMNNSTSSFLPWLKVLGKLELC 516
              A+ LV A+KPW+ DL+LALG+ HIM  + +          S      W  +L K+EL 
Sbjct: 1066 VYAVRLVTALKPWLPDLVLALGARHIMKQTSEEGTQFTESEQSELQLPSWTSILAKIELD 1125

Query: 515  VISKLDQDEEVS------DFTVFKDIMDMVVLILRRNQKVLDSVGSIFLSGLVMLLERQE 354
             ++ +  +EE          + FK ++ M+ L+LR N  +LD+VG IF++   + LER++
Sbjct: 1126 ELANISPNEEAERVSEPGKLSSFKKLIGMMTLLLRGNSSILDAVGKIFMTASAVALERED 1185

Query: 353  YGLVLGIVHFVCVRLVQHEHGEWEDLQVMLASLQELYPQIENSIKD-STSEDGRQMLDRA 177
            +GL+LG++HFVCV+LV HEH  W+ L +MLASL+ +YP+IE  +++ S +E G+Q L +A
Sbjct: 1186 FGLLLGLLHFVCVKLVGHEHRGWQGLDMMLASLEGIYPEIERQVEEPSGNEHGKQKLQKA 1245

Query: 176  MTLLGPVWAKYVFKDGGGSVMEE 108
              LL P+W  Y  +  G S+MEE
Sbjct: 1246 RALLEPIWINYTCESEGPSMMEE 1268


>ref|XP_002525267.1| conserved hypothetical protein [Ricinus communis]
            gi|223535425|gb|EEF37095.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1216

 Score =  218 bits (555), Expect = 2e-54
 Identities = 122/321 (38%), Positives = 186/321 (57%), Gaps = 7/321 (2%)
 Frame = -3

Query: 1049 KKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFTSAYLQVIIPTLRKHCHD-ISLL 873
            +K M N +K+ T VLKF+VD+  +  + +    CL FTS+Y++ +I  L K  ++ +   
Sbjct: 896  EKIMSNKVKLLTTVLKFIVDSTAMGFLSNTHRRCLSFTSSYIKYVIHVLGKQSNERVQFK 955

Query: 872  HEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXLPDAFXXXXXXXXXLVSIESYFGSR 693
             +++K  +LCLKSSF+YAAK                 + F         + SIE   GS 
Sbjct: 956  EDNLKECILCLKSSFSYAAKLLNLILKDTNEASPPPTETFNLANDMLDLITSIELSLGSN 1015

Query: 692  NAISLVPAVKPWVSDLILALGSSHIMTASPDNRAPPAAMNNSTSSFLPWLKVLGKLELCV 513
             A  L    K W+ DLILALGS  I   +P       A+++    F  W  +L ++ELC 
Sbjct: 1016 FAARLAAGAKSWLPDLILALGSRCIFQQTPAESTYLTALSHVKLHFPSWPLILAEIELCE 1075

Query: 512  ISKL------DQDEEVSDFTVFKDIMDMVVLILRRNQKVLDSVGSIFLSGLVMLLERQEY 351
            ISK       D+D E  +F +F+  ++M++ +L+ N KVLD+VG IFL+  ++ LER+++
Sbjct: 1076 ISKDSPEKEDDRDSEPDEFPLFEKFIEMILSLLKGNPKVLDAVGVIFLTYSIVGLERKDF 1135

Query: 350  GLVLGIVHFVCVRLVQHEHGEWEDLQVMLASLQELYPQIENSIKDSTSEDGRQMLDRAMT 171
            GLVLG++HFV V+LV  E  EW +L++ML+SL ++YPQIE   ++  +ED RQ L+ A  
Sbjct: 1136 GLVLGLLHFVRVKLVGQEDREWTELEMMLSSLPDIYPQIERESEEQINEDARQKLESARA 1195

Query: 170  LLGPVWAKYVFKDGGGSVMEE 108
            LL PVW  +V++ G  + MEE
Sbjct: 1196 LLEPVWLYHVYETGRFTAMEE 1216


>ref|XP_002303400.1| predicted protein [Populus trichocarpa] gi|222840832|gb|EEE78379.1|
            predicted protein [Populus trichocarpa]
          Length = 1219

 Score =  208 bits (529), Expect = 2e-51
 Identities = 126/324 (38%), Positives = 183/324 (56%), Gaps = 7/324 (2%)
 Frame = -3

Query: 1058 SCDKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFTSAYLQVIIPTLRKHCHD-I 882
            S  ++ M N +KM T VLK +VD+  +  +    G CL FTSAYL+ II  L     + +
Sbjct: 896  STKERGMSNKVKMLTAVLKLIVDSIAMGLLSRIHGRCLNFTSAYLKHIIFALEHQSSEKL 955

Query: 881  SLLHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXLPDAFXXXXXXXXXLVSIESYF 702
                +++K   LCLKSSF+YAAK               LP+AF         + SIE + 
Sbjct: 956  QFKEDELKDFFLCLKSSFSYAAKLLNLILRDTSETSPLLPEAFDLVNDMLDLITSIELHL 1015

Query: 701  GSRNAISLVPAVKPWVSDLILALGSSHIMTASPDNRAPPAAMNNSTSSFLPWLKVLGKLE 522
            GS  A  LV A K W+ DLILALGS  ++  +    A   A++   S +  W  +L K E
Sbjct: 1016 GSGFAAGLVAAAKSWLPDLILALGSPCMLNKTQVASAYITALDCIKSGYPSWPIILAKTE 1075

Query: 521  LCVISKLDQDE------EVSDFTVFKDIMDMVVLILRRNQKVLDSVGSIFLSGLVMLLER 360
            L  I + + +E      E  +F  FK  M+M+V +L+    +LD+VG I L+G V+ LER
Sbjct: 1076 LYEIREANPEEVDDITSEPEEFRAFKKFMEMIVSLLKGKFNILDAVGVILLTGSVVGLER 1135

Query: 359  QEYGLVLGIVHFVCVRLVQHEHGEWEDLQVMLASLQELYPQIENSIKDSTSEDGRQMLDR 180
            +++G+VLG++HFVCV+LV  E  EW +L +MLASL ++YPQIE  I++ + E+ RQ L  
Sbjct: 1136 KDFGVVLGLLHFVCVKLVGEEDREWNELDMMLASLPDIYPQIERGIEEQSDENARQKLCS 1195

Query: 179  AMTLLGPVWAKYVFKDGGGSVMEE 108
            A  LL  VW  ++++ G  S M+E
Sbjct: 1196 ARMLLDHVWFYHLYETGRFSAMKE 1219


Top