BLASTX nr result

ID: Coptis23_contig00013618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013618
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ...   502   e-140
ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release ...   501   e-140
ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
ref|XP_002304621.1| predicted protein [Populus trichocarpa] gi|2...   498   e-139
gb|ADE75663.1| unknown [Picea sitchensis]                             497   e-138

>ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Glycine max]
          Length = 437

 Score =  502 bits (1293), Expect = e-140
 Identities = 250/260 (96%), Positives = 256/260 (98%)
 Frame = +2

Query: 2   DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTID 181
           DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTID
Sbjct: 53  DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTID 112

Query: 182 FDPFRPINVSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFS 361
           F+PFRPIN SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFS
Sbjct: 113 FEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFS 172

Query: 362 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINATTSRPNVSGLILAGSAD 541
           VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYIN  TS+PNVSGLILAGSAD
Sbjct: 173 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSAD 232

Query: 542 FKTELSQSDMFDPRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFVQEKRLIGKYF 721
           FKTELSQSDMFDPRLQAKILNV DVSYGGENGFNQAIELSAEILSNVKF+QEKRLIGKYF
Sbjct: 233 FKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYF 292

Query: 722 EEISQDTGKYVFGIDDTLKA 781
           EEISQDTGKYVFG+DDTLKA
Sbjct: 293 EEISQDTGKYVFGVDDTLKA 312


>ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Glycine max]
          Length = 437

 Score =  501 bits (1291), Expect = e-140
 Identities = 250/260 (96%), Positives = 256/260 (98%)
 Frame = +2

Query: 2   DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTID 181
           DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTID
Sbjct: 53  DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTID 112

Query: 182 FDPFRPINVSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFS 361
           F+PFRPIN SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFS
Sbjct: 113 FEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFS 172

Query: 362 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINATTSRPNVSGLILAGSAD 541
           VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE ATQFYINA TS+PNVSGLILAGSAD
Sbjct: 173 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGSAD 232

Query: 542 FKTELSQSDMFDPRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFVQEKRLIGKYF 721
           FKTELSQSDMFDPRLQAKILNV DVSYGGENGFNQAIELSAEILSNVKF+QEKRLIGKYF
Sbjct: 233 FKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYF 292

Query: 722 EEISQDTGKYVFGIDDTLKA 781
           EEISQDTGKYVFG+DDTLKA
Sbjct: 293 EEISQDTGKYVFGVDDTLKA 312


>ref|XP_002297898.1| predicted protein [Populus trichocarpa] gi|222845156|gb|EEE82703.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  499 bits (1286), Expect = e-139
 Identities = 248/260 (95%), Positives = 256/260 (98%)
 Frame = +2

Query: 2   DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTID 181
           DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTID
Sbjct: 53  DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTID 112

Query: 182 FDPFRPINVSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFS 361
           F+PFRPIN SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+
Sbjct: 113 FEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFT 172

Query: 362 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINATTSRPNVSGLILAGSAD 541
           VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYIN  TS+PNVSGLILAGSAD
Sbjct: 173 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSAD 232

Query: 542 FKTELSQSDMFDPRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFVQEKRLIGKYF 721
           FKTELSQSDMFDPRLQAKILNV DVSYGGENGFNQAIELSAEILSNVKF+QEKRLIGKYF
Sbjct: 233 FKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYF 292

Query: 722 EEISQDTGKYVFGIDDTLKA 781
           EEISQDTGKYVFG+DDTLKA
Sbjct: 293 EEISQDTGKYVFGVDDTLKA 312


>ref|XP_002304621.1| predicted protein [Populus trichocarpa] gi|222842053|gb|EEE79600.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  498 bits (1281), Expect = e-139
 Identities = 247/260 (95%), Positives = 256/260 (98%)
 Frame = +2

Query: 2   DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTID 181
           DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+T+DGKEKKVTID
Sbjct: 53  DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTID 112

Query: 182 FDPFRPINVSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFS 361
           F+PFRPIN SLYLCDNKFHTEAL+ELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+
Sbjct: 113 FEPFRPINASLYLCDNKFHTEALSELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFT 172

Query: 362 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINATTSRPNVSGLILAGSAD 541
           VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYIN  TS+PNVSGLILAGSAD
Sbjct: 173 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSAD 232

Query: 542 FKTELSQSDMFDPRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFVQEKRLIGKYF 721
           FKTELSQSDMFDPRLQAKILNV DVSYGGENGFNQAIELSAEILSNVKF+QEKRLIGKYF
Sbjct: 233 FKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYF 292

Query: 722 EEISQDTGKYVFGIDDTLKA 781
           EEISQDTGKYVFG+DDTLKA
Sbjct: 293 EEISQDTGKYVFGVDDTLKA 312


>gb|ADE75663.1| unknown [Picea sitchensis]
          Length = 437

 Score =  497 bits (1280), Expect = e-138
 Identities = 246/260 (94%), Positives = 256/260 (98%)
 Frame = +2

Query: 2   DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTID 181
           DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TDDGKEKKVTID
Sbjct: 53  DEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTID 112

Query: 182 FDPFRPINVSLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFS 361
           F+PF+PIN SLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+
Sbjct: 113 FEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFT 172

Query: 362 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINATTSRPNVSGLILAGSAD 541
           VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYIN  TS+PNVSGLILAGSAD
Sbjct: 173 VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSAD 232

Query: 542 FKTELSQSDMFDPRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFVQEKRLIGKYF 721
           FKTELSQSDMFDPRLQAKILNV DVSYGGENGFNQAIELS+EILSNVKF+QEKRLIGKYF
Sbjct: 233 FKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYF 292

Query: 722 EEISQDTGKYVFGIDDTLKA 781
           EEISQDTGKYVFG++DTLKA
Sbjct: 293 EEISQDTGKYVFGVEDTLKA 312


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