BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013604
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              485   e-135
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   485   e-135
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   465   e-128
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   463   e-128
ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding pro...   453   e-125

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  485 bits (1249), Expect = e-135
 Identities = 239/328 (72%), Positives = 285/328 (86%)
 Frame = +1

Query: 4    KVDKGYMSPHFINNPDKSIVEFENAKVLVTDQRISSIKEIIPLLEKTAQLSVPLLIIAED 183
            K+DKGYMSPHFI N DKSIVEFENAKVLVTDQ+IS+IK I+PLLEKT QLSVPLLIIAED
Sbjct: 235  KIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAED 294

Query: 184  VTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTGADFXXXXXXXXXXXXX 363
            ++++VL TL++NK++GI NVA ++CPGFGEGKKA+LQDIAL+TGADF             
Sbjct: 295  ISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSAT 354

Query: 364  SDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETDSSYLSKKLSERVAKLS 543
            SDQLG+A+K+ I+S+STT VADP+TK EI+ARI QIKKDL+ETDSSYLS+KLSER+AKLS
Sbjct: 355  SDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKLS 414

Query: 544  GGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGVTFIHLSKYIPAIKDCM 723
            GGVAIIKVGA TE ELEDRKLRIEDAKNATFAAMDEGI PGGG T+IHL + IP IK  M
Sbjct: 415  GGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHSM 474

Query: 724  EDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQTGYNALTDKYEDLFDA 903
            EDPDE++GADI++KAL  PA +IA+NAGVDG+VV+EK+  C W+TGY+A+T +Y+DL +A
Sbjct: 475  EDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLNA 534

Query: 904  GVIDPCRVSRCALQNAASIAGILLLTQA 987
            GV+DPCRVSRCALQNA S+AGI+L TQA
Sbjct: 535  GVVDPCRVSRCALQNAVSVAGIVLTTQA 562


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
            vinifera]
          Length = 602

 Score =  485 bits (1249), Expect = e-135
 Identities = 239/328 (72%), Positives = 285/328 (86%)
 Frame = +1

Query: 4    KVDKGYMSPHFINNPDKSIVEFENAKVLVTDQRISSIKEIIPLLEKTAQLSVPLLIIAED 183
            K+DKGYMSPHFI N DKSIVEFENAKVLVTDQ+IS+IK I+PLLEKT QLSVPLLIIAED
Sbjct: 254  KIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAED 313

Query: 184  VTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTGADFXXXXXXXXXXXXX 363
            ++++VL TL++NK++GI NVA ++CPGFGEGKKA+LQDIAL+TGADF             
Sbjct: 314  ISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSAT 373

Query: 364  SDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETDSSYLSKKLSERVAKLS 543
            SDQLG+A+K+ I+S+STT VADP+TK EI+ARI QIKKDL+ETDSSYLS+KLSER+AKLS
Sbjct: 374  SDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKLS 433

Query: 544  GGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGVTFIHLSKYIPAIKDCM 723
            GGVAIIKVGA TE ELEDRKLRIEDAKNATFAAMDEGI PGGG T+IHL + IP IK  M
Sbjct: 434  GGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHSM 493

Query: 724  EDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQTGYNALTDKYEDLFDA 903
            EDPDE++GADI++KAL  PA +IA+NAGVDG+VV+EK+  C W+TGY+A+T +Y+DL +A
Sbjct: 494  EDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLNA 553

Query: 904  GVIDPCRVSRCALQNAASIAGILLLTQA 987
            GV+DPCRVSRCALQNA S+AGI+L TQA
Sbjct: 554  GVVDPCRVSRCALQNAVSVAGIVLTTQA 581


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
            subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis]
          Length = 556

 Score =  465 bits (1197), Expect = e-128
 Identities = 228/328 (69%), Positives = 283/328 (86%)
 Frame = +1

Query: 4    KVDKGYMSPHFINNPDKSIVEFENAKVLVTDQRISSIKEIIPLLEKTAQLSVPLLIIAED 183
            K+DKGYMSP FI N +KS+VEF NA+VLVTDQRI+++KEI+PLLEKT QLSVPLLI AED
Sbjct: 208  KIDKGYMSPQFITNQEKSLVEFNNARVLVTDQRIATVKEIVPLLEKTMQLSVPLLIFAED 267

Query: 184  VTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTGADFXXXXXXXXXXXXX 363
            ++ +VL TL++NK++G+ NVA ++CPGFGEGKKA+LQDIALMTGADF             
Sbjct: 268  MSKQVLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDFGLTLMGAT 327

Query: 364  SDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETDSSYLSKKLSERVAKLS 543
            SDQLG+AQK+ I+S+STTIVAD +TKAEI+ARI Q+KKDL+ETD+ YLS+KLSER+AKLS
Sbjct: 328  SDQLGIAQKVTITSNSTTIVADSSTKAEIQARILQMKKDLAETDNKYLSRKLSERIAKLS 387

Query: 544  GGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGVTFIHLSKYIPAIKDCM 723
            GGVA+IKVGA TE ELEDRKLRIEDAKNAT+AAMDEGI PGGG  ++HLS+ I  I+D M
Sbjct: 388  GGVALIKVGAHTETELEDRKLRIEDAKNATYAAMDEGIVPGGGAAYVHLSEQISTIQDSM 447

Query: 724  EDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQTGYNALTDKYEDLFDA 903
            ED +E++GADI++KALL+PA +IA+NAGVDG+VVVEK+ +  W+ G+NA+T +YEDL DA
Sbjct: 448  EDENEQIGADIVAKALLVPAKTIATNAGVDGAVVVEKIRSSDWRIGFNAMTGEYEDLLDA 507

Query: 904  GVIDPCRVSRCALQNAASIAGILLLTQA 987
            GV+DPCRVSRCALQ+AASIAG++L TQA
Sbjct: 508  GVVDPCRVSRCALQSAASIAGLVLTTQA 535


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Cucumis
            sativus]
          Length = 587

 Score =  463 bits (1192), Expect = e-128
 Identities = 233/328 (71%), Positives = 275/328 (83%)
 Frame = +1

Query: 4    KVDKGYMSPHFINNPDKSIVEFENAKVLVTDQRISSIKEIIPLLEKTAQLSVPLLIIAED 183
            K+DKGYMSP FI N DKSIVEF+NAKVLVTDQRISS+KEI+PLLEKT QLS+PLLI AED
Sbjct: 239  KIDKGYMSPQFITNQDKSIVEFDNAKVLVTDQRISSVKEIVPLLEKTVQLSLPLLIFAED 298

Query: 184  VTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTGADFXXXXXXXXXXXXX 363
            ++ +VL TL++NK++G+ NVA ++CPG GE KKA+LQDIALMTGADF             
Sbjct: 299  ISIKVLETLVVNKIQGLVNVAVVKCPGVGERKKALLQDIALMTGADFLSGDLGLGLEGAT 358

Query: 364  SDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETDSSYLSKKLSERVAKLS 543
            SDQLG+A+K++I+S+STTIVADP+TK EI+ARI+QIKKDL ETD+  LS+KLSER+AKLS
Sbjct: 359  SDQLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLVETDNPNLSRKLSERIAKLS 418

Query: 544  GGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGVTFIHLSKYIPAIKDCM 723
            GGVA+IKVGA TEVELEDRKLRIEDAKNA FAAM+EGI PGGG T++HL + +P IK  M
Sbjct: 419  GGVAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMNEGIVPGGGATYVHLYELLPTIKQSM 478

Query: 724  EDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQTGYNALTDKYEDLFDA 903
            ED DE +GADI+ KALL PA  IASNAG DG VVVEK  AC W+ GYNA+TDKYEDLF+A
Sbjct: 479  EDQDELIGADIVGKALLAPAKLIASNAGDDGVVVVEKTRACDWRHGYNAMTDKYEDLFNA 538

Query: 904  GVIDPCRVSRCALQNAASIAGILLLTQA 987
            GV+DPC VSRCALQ AAS+ GI+L TQA
Sbjct: 539  GVVDPCLVSRCALQIAASVTGIVLTTQA 566


>ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Brachypodium distachyon]
          Length = 590

 Score =  453 bits (1166), Expect = e-125
 Identities = 218/328 (66%), Positives = 274/328 (83%)
 Frame = +1

Query: 4    KVDKGYMSPHFINNPDKSIVEFENAKVLVTDQRISSIKEIIPLLEKTAQLSVPLLIIAED 183
            K+DKGY+SPHFI NPDK+IVEFENA+VL+TDQR++ I+EI+PLLEKT QLSVPLLIIAED
Sbjct: 235  KIDKGYISPHFITNPDKAIVEFENARVLLTDQRVNEIQEILPLLEKTTQLSVPLLIIAED 294

Query: 184  VTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTGADFXXXXXXXXXXXXX 363
            V+  V +TL++NKL G+ NVA ++CPG G+ KKAILQDIA+MTGADF             
Sbjct: 295  VSHTVYSTLVLNKLNGLLNVAVVKCPGLGDEKKAILQDIAIMTGADFFVSDLGWGLQAIT 354

Query: 364  SDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETDSSYLSKKLSERVAKLS 543
            SDQLG+AQKI I+S+STTI+A P+ + EI ARI Q+KKDL ET S+YL ++ S R+AKLS
Sbjct: 355  SDQLGMAQKITITSESTTIIAHPSMRPEIEARIMQLKKDLEETTSAYLKERFSARIAKLS 414

Query: 544  GGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGVTFIHLSKYIPAIKDCM 723
             GVA+IKVGA TE ELEDRKLR+EDAKNATFAA+ EGIAPGGGVT++ LSK+IP+I D +
Sbjct: 415  RGVAVIKVGAATEAELEDRKLRVEDAKNATFAAISEGIAPGGGVTYVQLSKHIPSIMDLV 474

Query: 724  EDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQTGYNALTDKYEDLFDA 903
            +DP+E++G +I+ KALL+PA  IA NAG DGS +VEKLL  +W+ GYNA+TDK+EDL DA
Sbjct: 475  DDPEEKIGVNIVGKALLVPAMMIARNAGADGSAIVEKLLESEWRVGYNAMTDKFEDLVDA 534

Query: 904  GVIDPCRVSRCALQNAASIAGILLLTQA 987
            GV+DPCRV+RC LQN+ASI+G++L+TQA
Sbjct: 535  GVVDPCRVARCVLQNSASISGLILMTQA 562