BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013578
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
emb|CBI23729.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   103   2e-20
ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...    93   3e-17
ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    92   6e-17

>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
 Frame = -1

Query: 298  RTHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSNLS 125
            R+HRSKEG  N +FLY IVPGKSIAC LETLLINQLP +GF+L N++DGKHRNFGT+NLS
Sbjct: 1064 RSHRSKEGMDNAAFLYFIVPGKSIACLLETLLINQLPIKGFKLTNVSDGKHRNFGTTNLS 1123

Query: 124  LESLTLH 104
            LES+T+H
Sbjct: 1124 LESVTVH 1130


>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = -1

Query: 298  RTHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSNLS 125
            R HRSKEG    SFLY +VPGKS+ACQLETLLINQLP QGFQL+N ADGKHRNFGT + S
Sbjct: 1047 RAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLDHS 1106

Query: 124  LESLTLHQ 101
            +E +TLHQ
Sbjct: 1107 VEVVTLHQ 1114


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = -1

Query: 298  RTHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSNLS 125
            R HRSKEG    SFLY +VPGKS+ACQLETLLINQLP QGFQL+N ADGKHRNFGT + S
Sbjct: 1077 RAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLDHS 1136

Query: 124  LESLTLHQ 101
            +E +TLHQ
Sbjct: 1137 VEVVTLHQ 1144


>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/59 (74%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
 Frame = -1

Query: 298  RTHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSNL 128
            R HRSKEG  + SFLY +VPGKS+ACQ+ETLLINQLP +GF L N+ADGKHRNFGTSN+
Sbjct: 1170 RAHRSKEGMQDASFLYFLVPGKSLACQIETLLINQLPNRGFLLSNIADGKHRNFGTSNV 1228


>ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 675

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/66 (65%), Positives = 57/66 (86%), Gaps = 2/66 (3%)
 Frame = -1

Query: 298 RTHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSNLS 125
           ++HR KEG  + +FLY++VPGKS+ACQLETLLIN+LP  GFQL N+ADGKHRNFGT+NL 
Sbjct: 608 QSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINRLPDHGFQLTNVADGKHRNFGTANLL 667

Query: 124 LESLTL 107
            +++T+
Sbjct: 668 SDNVTV 673