BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013565
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   182   1e-43
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   173   6e-41
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...   169   1e-39
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...   169   1e-39
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  182 bits (462), Expect = 1e-43
 Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 12/305 (3%)
 Frame = +2

Query: 53  MSSLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDNPNFVKLHLNQATENNNISLMVCD 232
           MS LP E+I  IL RLP K LL  R VSKPWC+LID PNFVKLHL  + + ++   ++  
Sbjct: 1   MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILR 60

Query: 233 DNENLYSVDYS-----TSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNP 394
              +++ +D+        C    E+++P     +G++++GS NGLLCI     D+ +WNP
Sbjct: 61  TTSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNP 120

Query: 395 CTNEYKKLPIAPAVAESIEDWESHITY--GFCYDSTVDDYKVVKVAFLHGGFDYEELDDD 568
            T +++ +P  P   +     +S   Y  GF YDS  DDYK+V++A   GG         
Sbjct: 121 STRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGG--------- 171

Query: 569 KNNEILGSVVEVYSLGTNSWHRIENSQY--YMCSNSALCVNQRLNWLATKKASSDVPTLI 742
                  S V+VYSL   SW RI +  Y  +    + +  N  L+W+  +   S+V  ++
Sbjct: 172 -GKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIV 230

Query: 743 VSFDFVAEQFREV--PHPKCVCSIMDARVLGGQLCILYRPSGGGADMWVMKDYGVIDSWN 916
           V+ D   E +REV  P  K     +D  VL G LC L    G   D+W+MK+YGV +SW 
Sbjct: 231 VALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWT 290

Query: 917 CLFTI 931
            LF++
Sbjct: 291 KLFSV 295


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  173 bits (438), Expect = 6e-41
 Identities = 103/304 (33%), Positives = 163/304 (53%), Gaps = 11/304 (3%)
 Frame = +2

Query: 53  MSSLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDNPNFVKLHLNQATENNNISLMVCD 232
           M+ LP E+ T ILSR+P K LL+ R   K W +LID+ +F+ LHL+++ +    S+++  
Sbjct: 1   MADLPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLHLSKSRD----SVIILR 56

Query: 233 DNENLYSVDYSTSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEY 409
            +  LY +D + S     E+D+P     N ++++GSCNGLLCI     D+  WNP   ++
Sbjct: 57  QHSRLYELDLN-SMDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKH 115

Query: 410 KKLPIAPAVAESIEDWESHIT------YGFCYDSTVDDYKVVKVAFLHGGFDYEELDDDK 571
           + +P  P + +   +  +  T      YGF YDS  DDYK+V +++            D 
Sbjct: 116 RIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYF----------VDL 165

Query: 572 NNEILGSVVEVYSLGTNSWHRIENSQYYMC--SNSALCVNQRLNWLATKKASSDVPTLIV 745
           +N    S V++Y++ T+ W  + +  Y +C      + V+  L+W+ T+    +   LIV
Sbjct: 166 HNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIV 225

Query: 746 SFDFVAEQFREVPHPKCVCS--IMDARVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNC 919
           +FD   E FREV  P  V     MD  +L G LCI+      G D+WVM++YG  DSW  
Sbjct: 226 AFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCK 285

Query: 920 LFTI 931
           +FT+
Sbjct: 286 MFTV 289


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score =  169 bits (427), Expect = 1e-39
 Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
 Frame = +2

Query: 53  MSSLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDNPNFVKLHLNQATENNNISLMVCD 232
           M++LP E++T ILSRLPVKS+++ R   K W S+ID+ +FV  HLN++      S ++  
Sbjct: 2   MANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFVLFHLNKSH-----SSLILR 56

Query: 233 DNENLYSVDYSTSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEY 409
              +LYS+D  +     VE+ +P     N ++++GS NGLLCI     D+ +WNP   ++
Sbjct: 57  HRSHLYSLDLKSPEQNPVELSHPLMCYSNSIKVLGSSNGLLCISNVADDIALWNPFLRKH 116

Query: 410 KKLPIAPAVAESIEDWESHI----TYGFCYDSTVDDYKVVKVAFLHGGFDYEELDDDKNN 577
           + LP     A+     +S +     YGF + S  +DYK++ + +            D   
Sbjct: 117 RILP-----ADRFHRPQSSLFAARVYGFGHHSPSNDYKLLSITYF----------VDLQK 161

Query: 578 EILGSVVEVYSLGTNSWHRIENSQYYMC--SNSALCVNQRLNWLATKKASSDVPTLIVSF 751
               S V++Y+L ++SW  + +  Y +C      + V+  L+WL T+K     P LIVSF
Sbjct: 162 RTFDSQVQLYTLKSDSWKNLPSMPYALCCARTMGVFVSGSLHWLVTRKLQPHEPDLIVSF 221

Query: 752 DFVAEQFREVPHPKCVCSIMDARV--LGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLF 925
           D   E F EVP P  V    D +V  LGG LC++    G G D+WVM+ YG  +SW  LF
Sbjct: 222 DLTRETFHEVPLPVTVNGDFDMQVALLGGCLCVV-EHRGTGFDVWVMRVYGSRNSWEKLF 280

Query: 926 TI 931
           T+
Sbjct: 281 TL 282


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score =  169 bits (427), Expect = 1e-39
 Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 12/305 (3%)
 Frame = +2

Query: 53  MSSLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDNPNFVKLHLNQATENNNISLMVCD 232
           M+ LP EI+T ILS LPV+SLL+FR  SK   SLID+ +F+KLHL+ +   +    ++  
Sbjct: 1   MTDLPPEILTGILSLLPVQSLLRFRSTSKSLQSLIDSHSFIKLHLHNSFNRS----LILR 56

Query: 233 DNENLYSVDYSTSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDVIWNPCTNEYK 412
            N + Y ++  ++ T AV+++ P KGS N + +VGSCNGLLC+ +D     WNP   +++
Sbjct: 57  HNSDFYQINDFSNLTTAVKLNPPFKGSNNFISLVGSCNGLLCLFSDGEIAFWNPTICKHR 116

Query: 413 KLPI----APAVAESIEDWESHITYGFCYDSTVDDYKVVKVAFLHGGFDYEELDDDKNNE 580
            +P      P  +E    +     YGF +D   DDYK++ +      F + E+    +  
Sbjct: 117 IIPSLPIPTPQHSEPNNIYADFCVYGFGFDPLTDDYKLLTI------FCFVEIQQSTSE- 169

Query: 581 ILGSVVEVYSLGTNSWHRIENSQY--YMCSNSALCVNQRLNWLATKKASSDVPTLIVSFD 754
              S   ++S  TNSW  +    Y  Y      + V   L+W+ T+K     P +IV+F+
Sbjct: 170 ---SHARLFSSKTNSWKELPTMPYTLYYAQTMGVFVENSLHWIMTEKLDPLKPRVIVAFN 226

Query: 755 FVAEQFREVPHPKCVCSI------MDARVLGGQLCILYRPSGGGADMWVMKDYGVIDSWN 916
              E F EVP P+    +      +   VL G LC+         D+W+MK+YG  DSW 
Sbjct: 227 LTHEIFNEVPFPEIGEEVNSESFEIGVAVLEGCLCMTVNYQTVKIDVWLMKEYGCRDSWC 286

Query: 917 CLFTI 931
            LFT+
Sbjct: 287 KLFTL 291


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  169 bits (427), Expect = 1e-39
 Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 23/310 (7%)
 Frame = +2

Query: 71  EIITSILSRLPVKSLLKFRCVSKPWCSLIDNPNFVKLHLNQATENNNISLMVCDDNENLY 250
           EI   ILSRLPVKSL +FRCVSK WC  ID+P F+  HL ++++ +    ++  D  NL 
Sbjct: 6   EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLC 65

Query: 251 SVDYSTSCTEAVEI-DYPGKGSFNGVEIVGSCNGLLC-IHTDFFDVIWNPCTNEYKKLPI 424
           +VD  +    ++E+ + P K      E++GSCNGLL  +++DF   ++NP T E K +P+
Sbjct: 66  TVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPV 125

Query: 425 APAVAESIEDWESHIT-----YGFCYDSTVDDYKVVKVAFLHGGFDYEELDDDKNNEILG 589
           +P    +  D +S ++     YGF +D   +DYKVV+    +G         D  +    
Sbjct: 126 SPLELPNDLD-DSKVSSLFNFYGFGHDPINEDYKVVRFIHFYG---------DSPDGFFH 175

Query: 590 SVVEVYSLGTNSWHRIENSQYYM-----------CSNS-ALCVNQRLNWLAT--KKASSD 727
             V+VYSL +NSW RI++  Y +           C     +  N  ++W AT   K   +
Sbjct: 176 CEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKEN 235

Query: 728 VPTLIVSFDFVAEQFREVPHPKCVCS--IMDARVLGGQLCILYRPSGGGADMWVMKDYGV 901
              LIV+FD  AE+F+ +P P    +   M+  VLGG LC+    +    ++WVMK+YGV
Sbjct: 236 GSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGV 295

Query: 902 IDSWNCLFTI 931
            +SW  L T+
Sbjct: 296 KESWTHLCTV 305