BLASTX nr result

ID: Coptis23_contig00013560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013560
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524111.1| d-lactate dehydrogenase, putative [Ricinus c...   642   0.0  
ref|XP_002322755.1| predicted protein [Populus trichocarpa] gi|2...   636   e-180
ref|XP_002267321.1| PREDICTED: D-lactate dehydrogenase [cytochro...   630   e-178
ref|XP_003521508.1| PREDICTED: D-lactate dehydrogenase [cytochro...   619   e-175
ref|XP_004136541.1| PREDICTED: D-lactate dehydrogenase [cytochro...   615   e-174

>ref|XP_002524111.1| d-lactate dehydrogenase, putative [Ricinus communis]
            gi|223536679|gb|EEF38321.1| d-lactate dehydrogenase,
            putative [Ricinus communis]
          Length = 555

 Score =  642 bits (1656), Expect = 0.0
 Identities = 310/371 (83%), Positives = 340/371 (91%)
 Frame = +1

Query: 1    DKMTMDYEERYFHGKPQNSFHKAVNIPDXXXXXXXXXXXXKIVASCNKHKVAIVPYGGAT 180
            D MT+DY+ERYFHGKPQNSFHKAVN+PD             IV  C+K+KV IVPYGGAT
Sbjct: 108  DDMTLDYDERYFHGKPQNSFHKAVNVPDVVVFPRSEEDVSNIVKCCDKYKVPIVPYGGAT 167

Query: 181  SIEGHTLSPNGGVCIDMSSMKNVKALHVEDMDVVVEPGIGWMDLNEYLEPYGLFFPLDPG 360
            SIEGHTLSP+GGVCIDMS MK+VKALH+EDMDVVVEPGIGWM+LNEYLEPYGLFFPLDPG
Sbjct: 168  SIEGHTLSPHGGVCIDMSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG 227

Query: 361  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTGSRARKSAAGYDLTRLM 540
            PGATIGGMCATRCSGSLAVRYGTMRDNVISLKV+LANGDVVKT SRARKSAAGYDLTRL+
Sbjct: 228  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVILANGDVVKTASRARKSAAGYDLTRLV 287

Query: 541  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELLDEV 720
            IGSEGTLG+ITE+TLRLQKIPQHSVVAMCNFPT+KDAADVAIATMLSGIQVSRVELLDEV
Sbjct: 288  IGSEGTLGIITEITLRLQKIPQHSVVAMCNFPTIKDAADVAIATMLSGIQVSRVELLDEV 347

Query: 721  QLKAINLASGKKFPEVPTLMFEFIGTEAYSREQTVIVQNIVSQHNGSGFVFAEDPEAKKE 900
            Q++AIN+A+GK  PEVPTLMFEF+GTEAY+REQT+IVQ I S+HNGS F+FAE PEAKKE
Sbjct: 348  QVRAINIANGKNLPEVPTLMFEFVGTEAYAREQTLIVQKIASEHNGSDFIFAEQPEAKKE 407

Query: 901  LWKTRKEALWALFALKPTYEAMIADVCVPLSRLAEVISRSKQEIDASPLECAVIAHAGDG 1080
            LWK RKEALWA FA++P YEAMI+DVCVPLSRLAE+ISRSKQE+DASPL C VIAHAGDG
Sbjct: 408  LWKIRKEALWACFAMEPKYEAMISDVCVPLSRLAELISRSKQELDASPLVCTVIAHAGDG 467

Query: 1081 NFHALMLFDPN 1113
            NFH ++LFDPN
Sbjct: 468  NFHTVILFDPN 478


>ref|XP_002322755.1| predicted protein [Populus trichocarpa] gi|222867385|gb|EEF04516.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  636 bits (1640), Expect = e-180
 Identities = 311/371 (83%), Positives = 338/371 (91%)
 Frame = +1

Query: 1    DKMTMDYEERYFHGKPQNSFHKAVNIPDXXXXXXXXXXXXKIVASCNKHKVAIVPYGGAT 180
            D M+MDY+ERYFHGKPQ+SFHKAVNIPD             IV SC+KHKV IVPYGGAT
Sbjct: 32   DNMSMDYDERYFHGKPQHSFHKAVNIPDVVVFPRSEEEVSNIVKSCDKHKVPIVPYGGAT 91

Query: 181  SIEGHTLSPNGGVCIDMSSMKNVKALHVEDMDVVVEPGIGWMDLNEYLEPYGLFFPLDPG 360
            SIEGHTLSP+GG+CIDMS M+NVKALHVEDMDVVVEPGIGWM+LNEYLEP+GLFFPLDPG
Sbjct: 92   SIEGHTLSPHGGICIDMSLMQNVKALHVEDMDVVVEPGIGWMELNEYLEPHGLFFPLDPG 151

Query: 361  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTGSRARKSAAGYDLTRLM 540
            PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVL NGDVVKT SRARKSAAGYDLTRL+
Sbjct: 152  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLV 211

Query: 541  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELLDEV 720
            IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVEL+DEV
Sbjct: 212  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELMDEV 271

Query: 721  QLKAINLASGKKFPEVPTLMFEFIGTEAYSREQTVIVQNIVSQHNGSGFVFAEDPEAKKE 900
            Q++AIN+A+ K  PE PTLMFEFIGTEAY+REQT+IVQ I+S+H GS FVFAEDPEAKKE
Sbjct: 272  QVRAINIANDKNLPEFPTLMFEFIGTEAYAREQTLIVQKIISEHRGSDFVFAEDPEAKKE 331

Query: 901  LWKTRKEALWALFALKPTYEAMIADVCVPLSRLAEVISRSKQEIDASPLECAVIAHAGDG 1080
            LWK RKEALWA FA++P YEAMI+DVCVPLS LAE+ISRSK+E+DASPL C VIAHAGDG
Sbjct: 332  LWKIRKEALWACFAMEPKYEAMISDVCVPLSHLAELISRSKKELDASPLVCTVIAHAGDG 391

Query: 1081 NFHALMLFDPN 1113
            NFH ++LFDPN
Sbjct: 392  NFHTVILFDPN 402


>ref|XP_002267321.1| PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Vitis
            vinifera] gi|296089322|emb|CBI39094.3| unnamed protein
            product [Vitis vinifera]
          Length = 566

 Score =  630 bits (1625), Expect = e-178
 Identities = 308/370 (83%), Positives = 336/370 (90%)
 Frame = +1

Query: 1    DKMTMDYEERYFHGKPQNSFHKAVNIPDXXXXXXXXXXXXKIVASCNKHKVAIVPYGGAT 180
            D MTMDYEERY HGKPQNSFHKAVNIPD            KIV SC+ HKV IVPYGGAT
Sbjct: 119  DDMTMDYEERYIHGKPQNSFHKAVNIPDVVVFPRSEEEVSKIVKSCDMHKVPIVPYGGAT 178

Query: 181  SIEGHTLSPNGGVCIDMSSMKNVKALHVEDMDVVVEPGIGWMDLNEYLEPYGLFFPLDPG 360
            SIEGHTLSP+GGVCIDM+ MK+VKALHVEDMDVVVEPGIGW++LNEYLEPYGLFFPLDPG
Sbjct: 179  SIEGHTLSPHGGVCIDMTLMKSVKALHVEDMDVVVEPGIGWLELNEYLEPYGLFFPLDPG 238

Query: 361  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTGSRARKSAAGYDLTRLM 540
            PGATIGGMCATRCSGSLAVRYGTMRDNVI+LKVVLANGDVVKTGSRARKSAAGYDLTRL+
Sbjct: 239  PGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTGSRARKSAAGYDLTRLV 298

Query: 541  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELLDEV 720
            IGSEGTLGVITEVTLRLQKIPQ+SVVAMCNFPT+KDAADVAIATMLSGIQVSRVELLDEV
Sbjct: 299  IGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPTIKDAADVAIATMLSGIQVSRVELLDEV 358

Query: 721  QLKAINLASGKKFPEVPTLMFEFIGTEAYSREQTVIVQNIVSQHNGSGFVFAEDPEAKKE 900
            Q+KAIN+A+GK  PE PTLMFEFIGTEAYSREQ +IVQ I S+HN S FVF EDP+AKKE
Sbjct: 359  QVKAINIANGKSLPEAPTLMFEFIGTEAYSREQALIVQRIASEHNSSDFVFTEDPQAKKE 418

Query: 901  LWKTRKEALWALFALKPTYEAMIADVCVPLSRLAEVISRSKQEIDASPLECAVIAHAGDG 1080
            LWK RKEALWA FA++P++EAMI+DVCVPLS LAE+IS+SKQ++DAS L C V+AHAGDG
Sbjct: 419  LWKIRKEALWACFAMEPSFEAMISDVCVPLSHLAELISKSKQQLDASSLICPVVAHAGDG 478

Query: 1081 NFHALMLFDP 1110
            NFH ++LFDP
Sbjct: 479  NFHTIILFDP 488


>ref|XP_003521508.1| PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial-like
            [Glycine max]
          Length = 569

 Score =  619 bits (1597), Expect = e-175
 Identities = 303/371 (81%), Positives = 330/371 (88%)
 Frame = +1

Query: 1    DKMTMDYEERYFHGKPQNSFHKAVNIPDXXXXXXXXXXXXKIVASCNKHKVAIVPYGGAT 180
            D +++DY+ERY HGKPQNSFHKAVNIPD            KIV  CN HKV IVPYGGAT
Sbjct: 122  DNISLDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKLCNSHKVPIVPYGGAT 181

Query: 181  SIEGHTLSPNGGVCIDMSSMKNVKALHVEDMDVVVEPGIGWMDLNEYLEPYGLFFPLDPG 360
            SIEGHTLSP+GGVCIDMS MK VK LHV DMDVVVEPGIGWM+LNEYLEPYGLFFPLDPG
Sbjct: 182  SIEGHTLSPHGGVCIDMSLMKRVKELHVNDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG 241

Query: 361  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTGSRARKSAAGYDLTRLM 540
            PGA+IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGD+VKT SRARKSAAGYDLTRLM
Sbjct: 242  PGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLM 301

Query: 541  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELLDEV 720
            IGSEGTLGVITEVTLRLQKIPQ+SVVAMCNFP+VKDAADVAIATM+SGIQVSRVELLDEV
Sbjct: 302  IGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSVKDAADVAIATMMSGIQVSRVELLDEV 361

Query: 721  QLKAINLASGKKFPEVPTLMFEFIGTEAYSREQTVIVQNIVSQHNGSGFVFAEDPEAKKE 900
            Q+KAIN+A+GK  PE PTLMFEFIGTEAY+REQT IV+ +VS+HNGS FVFAE+PEAKKE
Sbjct: 362  QVKAINIANGKNLPECPTLMFEFIGTEAYAREQTQIVRKLVSEHNGSDFVFAEEPEAKKE 421

Query: 901  LWKTRKEALWALFALKPTYEAMIADVCVPLSRLAEVISRSKQEIDASPLECAVIAHAGDG 1080
            LWK RKEALWA FA++P   AM  DVCVPLS L ++ISRSK+E+DASPL C VIAHAGDG
Sbjct: 422  LWKVRKEALWACFAMEPNLVAMTTDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDG 481

Query: 1081 NFHALMLFDPN 1113
            NFH ++LFDPN
Sbjct: 482  NFHTVILFDPN 492


>ref|XP_004136541.1| PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial-like
            [Cucumis sativus]
          Length = 566

 Score =  615 bits (1587), Expect = e-174
 Identities = 301/372 (80%), Positives = 331/372 (88%)
 Frame = +1

Query: 1    DKMTMDYEERYFHGKPQNSFHKAVNIPDXXXXXXXXXXXXKIVASCNKHKVAIVPYGGAT 180
            D MT+DY+ERYFHGKPQNSFH AVNIPD            +I+  C+++KV IVPYGGAT
Sbjct: 119  DNMTLDYDERYFHGKPQNSFHVAVNIPDVVVFPRSEEEVSEIIKLCDQYKVPIVPYGGAT 178

Query: 181  SIEGHTLSPNGGVCIDMSSMKNVKALHVEDMDVVVEPGIGWMDLNEYLEPYGLFFPLDPG 360
            SIEGHTL+PNGG+CIDMS M  VKALHVEDMDV VEPGIGWM+LNEYLEPYGLFFPLDPG
Sbjct: 179  SIEGHTLAPNGGLCIDMSLMNKVKALHVEDMDVTVEPGIGWMELNEYLEPYGLFFPLDPG 238

Query: 361  PGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTGSRARKSAAGYDLTRLM 540
            PGATIGGMCATRCSGSLAVRYGTMRDNVI+LK VLANGDVVKT SRARKSAAGYDLTRLM
Sbjct: 239  PGATIGGMCATRCSGSLAVRYGTMRDNVINLKAVLANGDVVKTASRARKSAAGYDLTRLM 298

Query: 541  IGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTVKDAADVAIATMLSGIQVSRVELLDEV 720
            IGSEGTLGVITE+TLRLQK+P++SVVAMCNFP++KDAADVAIATMLSGIQVSR+ELLDEV
Sbjct: 299  IGSEGTLGVITEITLRLQKLPEYSVVAMCNFPSIKDAADVAIATMLSGIQVSRMELLDEV 358

Query: 721  QLKAINLASGKKFPEVPTLMFEFIGTEAYSREQTVIVQNIVSQHNGSGFVFAEDPEAKKE 900
            Q++AIN A+GK  PE PTLMFEFIGTEAYSREQT+IVQ IVS+HNGS FVFAEDPEAKKE
Sbjct: 359  QVRAINNANGKNLPESPTLMFEFIGTEAYSREQTLIVQQIVSEHNGSDFVFAEDPEAKKE 418

Query: 901  LWKTRKEALWALFALKPTYEAMIADVCVPLSRLAEVISRSKQEIDASPLECAVIAHAGDG 1080
            LWK RKEALWA FAL P +EAMI DVCVPLS LAE+IS SK+E+DAS L C VIAHAGDG
Sbjct: 419  LWKIRKEALWACFALVPHFEAMITDVCVPLSHLAELISSSKRELDASSLVCTVIAHAGDG 478

Query: 1081 NFHALMLFDPND 1116
            NFH ++LFDP +
Sbjct: 479  NFHTVILFDPKE 490


Top