BLASTX nr result

ID: Coptis23_contig00013539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013539
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29...   173   2e-41
ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]      171   9e-41
ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|2235...   165   7e-39
ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago...   162   4e-38
gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK...   161   1e-37

>ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3|
           unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  173 bits (438), Expect = 2e-41
 Identities = 92/163 (56%), Positives = 119/163 (73%), Gaps = 2/163 (1%)
 Frame = +2

Query: 131 SEIYQNSQRLKIRVRSGIEKXXXXXXXXXXXXXXXXEQLEFTSAP--STPELSYSINKDI 304
           SEIYQNS++L +R R G+E+                E+LEF+S+    +PEL++++ KDI
Sbjct: 9   SEIYQNSKKLLLRTRDGLERL---------------ERLEFSSSNPVDSPELAFAVKKDI 53

Query: 305 DQIRSLCADMERLSRSIPSKPQRDLWNRKIENVAQDVEQLKKSLENYTERNNKRMMEARQ 484
            QI+SLC +M+RL RSI +K QRDLW RK+E VA++ E LK+SL+ Y  R+ KRMMEA++
Sbjct: 54  SQIQSLCVEMDRLWRSISAKSQRDLWKRKVEQVAEESESLKESLDKYFLRHQKRMMEAKE 113

Query: 485 RAELLERVNGESSHVLRIFDNEAQAMQSARNSSKMLEEALDTG 613
           RAELL R NG+S+HVLRIFD EAQAMQSARNSS MLEEA   G
Sbjct: 114 RAELLGRANGDSAHVLRIFDEEAQAMQSARNSSMMLEEAYSKG 156


>ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]
          Length = 228

 Score =  171 bits (433), Expect = 9e-41
 Identities = 91/172 (52%), Positives = 122/172 (70%), Gaps = 2/172 (1%)
 Frame = +2

Query: 104 MEXXXXXXLSEIYQNSQRLKIRVRSGIEKXXXXXXXXXXXXXXXXEQLEFTSAPS--TPE 277
           +E      LSEIYQ+++RL +R R G+EK                E+LE+++A    +PE
Sbjct: 4   LEGGGGGTLSEIYQSAKRLLLRTRDGLEKL---------------ERLEYSAASGMDSPE 48

Query: 278 LSYSINKDIDQIRSLCADMERLSRSIPSKPQRDLWNRKIENVAQDVEQLKKSLENYTERN 457
           LS+SI KDI QI+SLC +M+RL RSI +K QRDLW RK+E VA++ + +K+SL+ Y  RN
Sbjct: 49  LSFSIKKDITQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRN 108

Query: 458 NKRMMEARQRAELLERVNGESSHVLRIFDNEAQAMQSARNSSKMLEEALDTG 613
            KRM EA++RAELL R +G+S+H+LRIFD+EAQAM S RNSS+MLEEA  TG
Sbjct: 109 QKRMTEAKERAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATG 160


>ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|223535001|gb|EEF36684.1|
           membrin, putative [Ricinus communis]
          Length = 229

 Score =  165 bits (417), Expect = 7e-39
 Identities = 86/165 (52%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
 Frame = +2

Query: 128 LSEIYQNSQRLKIRVRSGIEKXXXXXXXXXXXXXXXXEQLEFTSAPS---TPELSYSINK 298
           LSEI+Q+S++  +R R GIE+                E+LE +++     +PELS+++ K
Sbjct: 12  LSEIFQSSKKALLRARDGIERL---------------ERLENSTSNGGLDSPELSFAVKK 56

Query: 299 DIDQIRSLCADMERLSRSIPSKPQRDLWNRKIENVAQDVEQLKKSLENYTERNNKRMMEA 478
           DI QI+SLCA+++RL RSI +KPQRDLW RK+E VA++ E LK+SL+ Y  RN +R  EA
Sbjct: 57  DISQIQSLCAELDRLWRSIAAKPQRDLWKRKVEQVAEEAESLKQSLDRYFSRNQRRTREA 116

Query: 479 RQRAELLERVNGESSHVLRIFDNEAQAMQSARNSSKMLEEALDTG 613
           ++RAELL R NGES+HVLRIFD EAQAMQ+  NS  M+EE+L TG
Sbjct: 117 QERAELLGRANGESAHVLRIFDEEAQAMQAVHNSKSMMEESLSTG 161


>ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago truncatula]
           gi|355518672|gb|AET00296.1| Golgi SNAP receptor complex
           member [Medicago truncatula]
          Length = 222

 Score =  162 bits (410), Expect = 4e-38
 Identities = 80/157 (50%), Positives = 116/157 (73%)
 Frame = +2

Query: 131 SEIYQNSQRLKIRVRSGIEKXXXXXXXXXXXXXXXXEQLEFTSAPSTPELSYSINKDIDQ 310
           SEI+Q +++L +R R G+E+                E+LE++++ S+ +LS++++KDI Q
Sbjct: 9   SEIHQTARKLLLRTRDGLERL---------------ERLEYSNSSSSSDLSFAVSKDITQ 53

Query: 311 IRSLCADMERLSRSIPSKPQRDLWNRKIENVAQDVEQLKKSLENYTERNNKRMMEARQRA 490
           I+SLC +M +LSRSI +K QRDLWNRK+E +A++ E L++SLE Y  RN+KRMMEA++R 
Sbjct: 54  IQSLCVEMSQLSRSIGAKSQRDLWNRKVEQIAEEAESLRESLEKYNSRNHKRMMEAKERE 113

Query: 491 ELLERVNGESSHVLRIFDNEAQAMQSARNSSKMLEEA 601
           ELL RVNG+ SHVLRIFD++ QAM S RNS++ LE A
Sbjct: 114 ELLGRVNGDPSHVLRIFDDDTQAMLSVRNSARELENA 150


>gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK45862.1| unknown
           [Medicago truncatula]
          Length = 222

 Score =  161 bits (407), Expect = 1e-37
 Identities = 79/157 (50%), Positives = 116/157 (73%)
 Frame = +2

Query: 131 SEIYQNSQRLKIRVRSGIEKXXXXXXXXXXXXXXXXEQLEFTSAPSTPELSYSINKDIDQ 310
           SEI+Q +++L +R R G+E+                E+LE++++ S+ +LS++++KDI Q
Sbjct: 9   SEIHQTARKLLLRTRDGLERL---------------ERLEYSNSSSSSDLSFAVSKDITQ 53

Query: 311 IRSLCADMERLSRSIPSKPQRDLWNRKIENVAQDVEQLKKSLENYTERNNKRMMEARQRA 490
           I+SLC +M +LSRSI +K QRDLWNRK+E +A++ E L++SLE Y  RN+KRMMEA++R 
Sbjct: 54  IQSLCVEMSQLSRSIGAKSQRDLWNRKVEQIAEEAESLRESLEKYNSRNHKRMMEAKERE 113

Query: 491 ELLERVNGESSHVLRIFDNEAQAMQSARNSSKMLEEA 601
           ELL RVNG+ SHVL+IFD++ QAM S RNS++ LE A
Sbjct: 114 ELLGRVNGDPSHVLKIFDDDTQAMLSVRNSARELENA 150


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