BLASTX nr result

ID: Coptis23_contig00013536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013536
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27297.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-bin...    78   7e-13
emb|CAN80261.1| hypothetical protein VITISV_043950 [Vitis vinifera]    72   4e-11
emb|CBI15315.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-a...    67   1e-09

>emb|CBI27297.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   FVLNDIFKYVDEYE--MVESDAVAIAVNGVTENVTLTPVTPDPEPSHIPEHPMPENTTPE 174
           FVLND+F+Y+DE E  MVE+    IAVN V EN  + P+TP+PE +H+ +HP   NT+P 
Sbjct: 125 FVLNDVFRYMDERESLMVET----IAVNDVNENSPVAPLTPEPESTHVLDHPKSNNTSP- 179

Query: 175 VEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXXHSGQDEVLPVTEPASTV-PEDTPKKSYA 351
           VE    + E V + ++N                    +V PV+E  S V  ED PKKSYA
Sbjct: 180 VEEDAADDEEVCDLTENEGVPVSEEKVVCEIPVDPSKDVHPVSETVSAVINEDAPKKSYA 239


>ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
           [Vitis vinifera]
          Length = 486

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   FVLNDIFKYVDEYE--MVESDAVAIAVNGVTENVTLTPVTPDPEPSHIPEHPMPENTTPE 174
           FVLND+F+Y+DE E  MVE+    IAVN V EN  + P+TP+PE +H+ +HP   NT+P 
Sbjct: 125 FVLNDVFRYMDERESLMVET----IAVNDVNENSPVAPLTPEPESTHVLDHPKSNNTSP- 179

Query: 175 VEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXXHSGQDEVLPVTEPASTV-PEDTPKKSYA 351
           VE    + E V + ++N                    +V PV+E  S V  ED PKKSYA
Sbjct: 180 VEEDAADDEEVCDLTENEGVPVSEEKVVCEIPVDPSKDVHPVSETVSAVINEDAPKKSYA 239


>emb|CAN80261.1| hypothetical protein VITISV_043950 [Vitis vinifera]
          Length = 1124

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   FVLNDIFKYVDEYEMVESDAVAIAVNGVTENVTLTPVTPDPEPSHIPEHPMPENTTP--E 174
           FVLNDIF Y++E + ++ + V   V+G+ E      +TPDPE +H+P+H + +  TP  E
Sbjct: 172 FVLNDIFTYIEEKKSLQENFVX--VDGINETAPTAALTPDPEANHVPDHLVVDPATPSFE 229

Query: 175 VEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXXH-SGQDEVLPVTEPASTVPEDTPKKSYA 351
            E    N   V +PSDN                 S ++E+  V + A    ED PKKSYA
Sbjct: 230 EEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPKKSYA 289


>emb|CBI15315.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   FVLNDIFKYVDEYEMVESDAVAIAVNGVTENVTLTPVTPDPEPSHIPEHPMPENTTP--E 174
           FVLNDIF Y++E + ++ +     V+G+ E      +TPDPE +H+P+H + +  TP  E
Sbjct: 158 FVLNDIFTYIEEKKSLQENFAP--VDGINETAPTAALTPDPEANHVPDHLVVDPATPSFE 215

Query: 175 VEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXXH-SGQDEVLPVTEPASTVPEDTPKKSYA 351
            E    N   V +PSDN                 S ++E+  V + A    ED PKKSYA
Sbjct: 216 EEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPKKSYA 275


>ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-activating
           protein-binding protein 1-like [Cucumis sativus]
          Length = 472

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FVLNDIFKYVDEYEMVESDAVAIAVNGVTENVTLTPVTPDPEPSHIPEHPMPENTTPEVE 180
           +VLND+ +YV+E E + S++ +   + + +N      TP+PEPSH+P H   E  T   E
Sbjct: 126 YVLNDVLRYVEETESIRSNSSS--GDAIKDNTVTVTSTPEPEPSHVPNHLTVEPPTALEE 183

Query: 181 VSYGNGEVVHEPSDNGXXXXXXXXXXXXXXHSGQDE-VLPVTEPASTVPEDTPKKSYA 351
               N   V +PS N               H  + E V+   + A    ED PKKSYA
Sbjct: 184 EDMNNVPEVCDPSSNDEGSVIEEEVVVEAPHPSEHEVVVTAVDAAPVAQEDAPKKSYA 241


Top