BLASTX nr result

ID: Coptis23_contig00013507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013507
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530263.1| conserved hypothetical protein [Ricinus comm...   106   8e-21
ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254...   103   4e-20
emb|CBI21541.3| unnamed protein product [Vitis vinifera]              103   4e-20
ref|XP_002310623.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
emb|CAN81506.1| hypothetical protein VITISV_035404 [Vitis vinifera]    95   2e-17

>ref|XP_002530263.1| conserved hypothetical protein [Ricinus communis]
           gi|223530229|gb|EEF32133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score =  106 bits (264), Expect = 8e-21
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = -1

Query: 516 DEAMVWTLSGPDEVSELSSKQMEIAYVLLVYEAVEFCNLVINESLMRHVSGVQSHYSSYI 337
           ++++VWT+S P+ +S+LS K  E+ YVLLVYEA EFCNLVINESL+ HVS ++S Y SY 
Sbjct: 138 EKSIVWTMSVPEHISQLSPKGTEVQYVLLVYEAEEFCNLVINESLLDHVSRIRSRYPSYT 197

Query: 336 VCYLTNKLMSYINKSD 289
           VCYLTN+LM+YINK +
Sbjct: 198 VCYLTNRLMAYINKRE 213


>ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254360 [Vitis vinifera]
          Length = 678

 Score =  103 bits (258), Expect = 4e-20
 Identities = 46/74 (62%), Positives = 63/74 (85%)
 Frame = -1

Query: 510 AMVWTLSGPDEVSELSSKQMEIAYVLLVYEAVEFCNLVINESLMRHVSGVQSHYSSYIVC 331
           ++VWT++ P+++S+LS + MEI YVLL+YEA EFCNLV NESLM HV GV+SHY S+ VC
Sbjct: 321 SIVWTMTVPEQISQLSPEGMEIPYVLLIYEAEEFCNLVTNESLMDHVLGVRSHYPSHTVC 380

Query: 330 YLTNKLMSYINKSD 289
           YLTN+LM+YI++ +
Sbjct: 381 YLTNRLMAYIHRRE 394


>emb|CBI21541.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  103 bits (258), Expect = 4e-20
 Identities = 46/74 (62%), Positives = 63/74 (85%)
 Frame = -1

Query: 510 AMVWTLSGPDEVSELSSKQMEIAYVLLVYEAVEFCNLVINESLMRHVSGVQSHYSSYIVC 331
           ++VWT++ P+++S+LS + MEI YVLL+YEA EFCNLV NESLM HV GV+SHY S+ VC
Sbjct: 183 SIVWTMTVPEQISQLSPEGMEIPYVLLIYEAEEFCNLVTNESLMDHVLGVRSHYPSHTVC 242

Query: 330 YLTNKLMSYINKSD 289
           YLTN+LM+YI++ +
Sbjct: 243 YLTNRLMAYIHRRE 256


>ref|XP_002310623.1| predicted protein [Populus trichocarpa] gi|222853526|gb|EEE91073.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 45/88 (51%), Positives = 65/88 (73%), Gaps = 5/88 (5%)
 Frame = -1

Query: 543 ADEGKNIRK-----DEAMVWTLSGPDEVSELSSKQMEIAYVLLVYEAVEFCNLVINESLM 379
           AD+G   R      + +++WT+S P+ +S+LS +  +I YV LVYEA EFCNLV++ESL+
Sbjct: 277 ADKGLTYRVTSNPIERSILWTMSAPEHISQLSREATDIRYVALVYEAEEFCNLVMSESLL 336

Query: 378 RHVSGVQSHYSSYIVCYLTNKLMSYINK 295
            HVS V+SHY S+ +CYLT +LM+Y+NK
Sbjct: 337 DHVSSVRSHYPSHTICYLTIRLMAYVNK 364


>emb|CAN81506.1| hypothetical protein VITISV_035404 [Vitis vinifera]
          Length = 454

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
 Frame = -1

Query: 510 AMVWTLSGPDEVSELSSKQMEIAYVLLVYEAVEFCNLVINESLMRHVSGVQSHYSSYIVC 331
           ++VWT++ P+++S+LS + MEI YVLL+YEA EFC+LV NESLM HV GV+SHY S+ VC
Sbjct: 321 SIVWTMTVPEQISQLSPEGMEIPYVLLIYEAEEFCBLVTNESLMDHVXGVRSHYPSHTVC 380

Query: 330 YLTNKLMS-YINKSDAAK------EGIHGCLSLFFWFPH*R*YLAKEVRC*DQIELFLH 175
           YLTN+    Y N ++++       E +   L+  F   H R       +C D+ EL  H
Sbjct: 381 YLTNREQGHYKNPTBSSSWRRPPVEEVLSKLTTHFLRVHSR-------QCIDEAELAEH 432


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