BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013506
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...   451   e-124
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...   435   e-119
ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arab...   430   e-118
ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana] g...   427   e-117

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  451 bits (1159), Expect = e-124
 Identities = 220/278 (79%), Positives = 245/278 (88%)
 Frame = +1

Query: 19  KNKKVLEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIG 198
           K +K ++IEGYP+EGLSIGGQETC+I P+LKLAFDIGRCPQRAISQDFLFI+H HMDHIG
Sbjct: 52  KKEKGIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIG 111

Query: 199 GLPMYVATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELR 378
           GLPMYVATRGLY+M+PP +IVP  IKENVE L QVHR+MD+SELK  LIGL++GEEF LR
Sbjct: 112 GLPMYVATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLR 171

Query: 379 KGIKVRAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIA 558
           K +KVRAFRTYH IPSQGY+VYS+KQKLKQEYVG PGNEIKNLKLSGVEIT T+T PEIA
Sbjct: 172 KDLKVRAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIA 231

Query: 559 FTGDTTSDFIVDPNNADVLRAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCN 738
           FTGDT SDFI+D  N D L A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  N
Sbjct: 232 FTGDTMSDFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQN 291

Query: 739 KAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 852
           KAILLIHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 292 KAILLIHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 329


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score =  451 bits (1159), Expect = e-124
 Identities = 220/278 (79%), Positives = 245/278 (88%)
 Frame = +1

Query: 19  KNKKVLEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIG 198
           K +K ++IEGYP+EGLSIGGQETC+I P+LKLAFDIGRCPQRAISQDFLFI+H HMDHIG
Sbjct: 12  KKEKGIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIG 71

Query: 199 GLPMYVATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELR 378
           GLPMYVATRGLY+M+PP +IVP  IKENVE L QVHR+MD+SELK  LIGL++GEEF LR
Sbjct: 72  GLPMYVATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLR 131

Query: 379 KGIKVRAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIA 558
           K +KVRAFRTYH IPSQGY+VYS+KQKLKQEYVG PGNEIKNLKLSGVEIT T+T PEIA
Sbjct: 132 KDLKVRAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIA 191

Query: 559 FTGDTTSDFIVDPNNADVLRAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCN 738
           FTGDT SDFI+D  N D L A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  N
Sbjct: 192 FTGDTMSDFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQN 251

Query: 739 KAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 852
           KAILLIHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 252 KAILLIHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 289


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score =  435 bits (1118), Expect = e-119
 Identities = 212/275 (77%), Positives = 242/275 (88%)
 Frame = +1

Query: 28  KVLEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLP 207
           K LEIEGY + GLSIGG ETCVIFPTLK+AFDIGRCP RA+SQ+FL ITHAHMDHIGGLP
Sbjct: 4   KDLEIEGYTVGGLSIGGHETCVIFPTLKVAFDIGRCPPRAVSQNFLLITHAHMDHIGGLP 63

Query: 208 MYVATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGI 387
           MYVATRGLY+M+PPT+IVP+ +KE+VEKL ++HR MDQSELK  LIGLD+GEEF LRK +
Sbjct: 64  MYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGLDVGEEFYLRKDL 123

Query: 388 KVRAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTG 567
           KV+AFRTYH IPSQGYI+YS KQKLK EYVG  GNEIKNLK SGVEIT T+T PEIAFTG
Sbjct: 124 KVKAFRTYHVIPSQGYILYSEKQKLKPEYVGLSGNEIKNLKSSGVEITYTLTEPEIAFTG 183

Query: 568 DTTSDFIVDPNNADVLRAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAI 747
           DT SDFIVD NN DVLRA+IL++E TFV+N+ TVEHARDYGHTHLSEI+ +A+ L N+AI
Sbjct: 184 DTMSDFIVDENNTDVLRARILVLECTFVNNSITVEHARDYGHTHLSEIISYAESLQNRAI 243

Query: 748 LLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 852
           LLIHFSARY  +EI+ AVSALPP+L+GR FALTEG
Sbjct: 244 LLIHFSARYTVEEIQHAVSALPPSLSGRTFALTEG 278


>ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arabidopsis lyrata subsp.
           lyrata] gi|297333394|gb|EFH63812.1| hypothetical protein
           ARALYDRAFT_476606 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  430 bits (1106), Expect = e-118
 Identities = 204/278 (73%), Positives = 240/278 (86%)
 Frame = +1

Query: 19  KNKKVLEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIG 198
           + KK ++IEGYPIEGLSIGG ETC+IFP+L++AFDIGRCP RAISQDFLFI+H+HMDHIG
Sbjct: 2   EKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIG 61

Query: 199 GLPMYVATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELR 378
           GLPMYVATRGLYKM+PPT+IVP  IKE VE L +VHR +D SELK  L+GLDIGEEF +R
Sbjct: 62  GLPMYVATRGLYKMKPPTIIVPKSIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIR 121

Query: 379 KGIKVRAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIA 558
           K +KV+AF+TYH I SQGY+VYS K KLKQEY+G  GNEIKNLK SGVEITD++T PE+A
Sbjct: 122 KDLKVKAFKTYHVIQSQGYVVYSTKHKLKQEYIGLSGNEIKNLKASGVEITDSITTPEVA 181

Query: 559 FTGDTTSDFIVDPNNADVLRAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCN 738
           FTGDTT+DF+VD +NAD L+AK+L++ESTF+D++ +VEHARDYGH HLSEIV HA +  N
Sbjct: 182 FTGDTTADFVVDESNADALKAKVLVMESTFLDDSVSVEHARDYGHIHLSEIVNHAAKFEN 241

Query: 739 KAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 852
           KAILLIHFSARY   EI  AVSALPP L GRVFALT+G
Sbjct: 242 KAILLIHFSARYTVKEIEDAVSALPPPLEGRVFALTQG 279


>ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana]
           gi|88984765|sp|Q8LGU7.3|RNZN_ARATH RecName: Full=Nuclear
           ribonuclease Z; Short=RNase Z; AltName: Full=Zinc
           phosphodiesterase NUZ; AltName: Full=tRNA 3
           endonuclease; AltName: Full=tRNase Z
           gi|20975609|emb|CAD22100.1| RNase Z [Arabidopsis
           thaliana] gi|90962972|gb|ABE02410.1| At1g74700
           [Arabidopsis thaliana] gi|332197502|gb|AEE35623.1|
           nuclear ribonuclease Z [Arabidopsis thaliana]
          Length = 280

 Score =  427 bits (1099), Expect = e-117
 Identities = 201/278 (72%), Positives = 240/278 (86%)
 Frame = +1

Query: 19  KNKKVLEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIG 198
           + KK ++IEGYPIEGLSIGG ETC+IFP+L++AFDIGRCP RAISQDFLFI+H+HMDHIG
Sbjct: 2   EKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIG 61

Query: 199 GLPMYVATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELR 378
           GLPMYVATRGLYKM+PPT+IVP  IKE VE L +VHR +D SELK  L+GLDIGEEF +R
Sbjct: 62  GLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIR 121

Query: 379 KGIKVRAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIA 558
           K +KV+AF+T+H I SQGY+VYS K KLK+EY+G  GNEIKNLK+SGVEITD++  PE+A
Sbjct: 122 KDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVA 181

Query: 559 FTGDTTSDFIVDPNNADVLRAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCN 738
           FTGDTTSDF+VD  NAD L+AK+L++ESTF+D++ +VEHARDYGH H+SEIV HA++  N
Sbjct: 182 FTGDTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVNHAEKFEN 241

Query: 739 KAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 852
           KAILLIHFSARY   EI  AVSALPP L GRVFALT+G
Sbjct: 242 KAILLIHFSARYTVKEIEDAVSALPPPLEGRVFALTQG 279