BLASTX nr result

ID: Coptis23_contig00013504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013504
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]   487   e-135
ref|XP_002265800.2| PREDICTED: myb family transcription factor A...   476   e-132
gb|AAV85474.1| myb family transcription factor-related protein [...   467   e-129
ref|XP_002523053.1| transcription factor, putative [Ricinus comm...   457   e-126
ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125

>emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]
          Length = 356

 Score =  487 bits (1253), Expect = e-135
 Identities = 251/365 (68%), Positives = 289/365 (79%), Gaps = 10/365 (2%)
 Frame = +3

Query: 72   MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 248
            MFH KKP TMNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP
Sbjct: 1    MFHHKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 60

Query: 249  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 428
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAL+LQRN +SS+G+M R
Sbjct: 61   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNIASSSGVMSR 120

Query: 429  SMTDRNVHISEAYRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACQTLAGDNM 608
            +  +          MQMEVQRRLHEQLEVQ+HLQLRIEAQGKYMQ ILEKACQTLAG+NM
Sbjct: 121  NTNE----------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLAGENM 170

Query: 609  ASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPIN 788
            A G+YK  G Q V DM  MKD   S+ FPSLQDL+IYGG+ LD+QQ MDR SLDGF    
Sbjct: 171  ALGNYKGIGNQGVPDMGAMKDFGSSLNFPSLQDLNIYGGDQLDLQQSMDR-SLDGFIQNT 229

Query: 789  DNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVSLTIDG 956
            +N+CLG++RP+ Y  + KNPL W+DD+R+Q+LG     LGSQ+DPFK D IQ    ++D 
Sbjct: 230  ENMCLGKKRPSPYSGSGKNPLIWSDDLRMQELGTAASCLGSQDDPFKGDQIQIAPPSMDR 289

Query: 957  GNEMDPIGDVYETKPAFHGDSVGDRKYEAS-SAKLDRPSPQRGSLSMNRVNSMSKVG--- 1124
            G +MD I D+YETKP   GD +G++K++ S SAKL RPSP+R  L  +R+N M   G   
Sbjct: 290  GADMDSISDIYETKPILSGDPMGEKKFDGSGSAKLGRPSPRRAPLPTDRMNPMINAGAMP 349

Query: 1125 -GRNS 1136
             GR+S
Sbjct: 350  QGRSS 354


>ref|XP_002265800.2| PREDICTED: myb family transcription factor APL [Vitis vinifera]
          Length = 347

 Score =  476 bits (1225), Expect = e-132
 Identities = 244/356 (68%), Positives = 282/356 (79%), Gaps = 9/356 (2%)
 Frame = +3

Query: 96   MNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 275
            MNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV
Sbjct: 1    MNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 60

Query: 276  KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGRSMTDRNVHI 455
            KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAL+LQRN +SS+G+M R+  +     
Sbjct: 61   KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNIASSSGVMSRNTNE----- 115

Query: 456  SEAYRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACQTLAGDNMASGSYKSGG 635
                 MQMEVQRRLHEQLEVQ+HLQLRIEAQGKYMQ ILEKACQTLAG+NMA G+YK  G
Sbjct: 116  -----MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLAGENMALGNYKGIG 170

Query: 636  IQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPINDNICLGRRR 815
             Q V DM  MKD   S+ FPSLQDL+IYGG+ LD+QQ MDR SLDGF    +N+CLG++R
Sbjct: 171  NQGVPDMGAMKDFGSSLNFPSLQDLNIYGGDQLDLQQSMDR-SLDGFIQNTENMCLGKKR 229

Query: 816  PNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVSLTIDGGNEMDPIGD 983
            P+ Y  + KNPL W+DD+R+Q+LG     LGSQ+DPFK D IQ    ++D G +MD I D
Sbjct: 230  PSPYSGSGKNPLIWSDDLRMQELGTAASCLGSQDDPFKGDQIQIAPPSMDRGADMDSISD 289

Query: 984  VYETKPAFHGDSVGDRKYEAS-SAKLDRPSPQRGSLSMNRVNSMSKVG----GRNS 1136
            +YETKP   GD +G++K++ S SAKL RPSP+R  L  +R+N M   G    GR+S
Sbjct: 290  IYETKPILSGDPMGEKKFDGSGSAKLGRPSPRRAPLPTDRMNPMINAGAMPQGRSS 345


>gb|AAV85474.1| myb family transcription factor-related protein [Populus tomentosa]
          Length = 356

 Score =  467 bits (1201), Expect = e-129
 Identities = 244/367 (66%), Positives = 286/367 (77%), Gaps = 10/367 (2%)
 Frame = +3

Query: 72   MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 248
            MFH+KKP TMNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP
Sbjct: 1    MFHTKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 60

Query: 249  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 428
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQP K+F+DHSIKDASALDLQR+A+SS+G+M R
Sbjct: 61   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPLKDFSDHSIKDASALDLQRSAASSSGMMSR 120

Query: 429  SMTDRNVHISEAYRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACQTLAGD-N 605
            SM +          MQMEVQRRLHEQLEVQ+HLQLR EAQGKY+Q++LEKACQTLAGD N
Sbjct: 121  SMNE----------MQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAGDQN 170

Query: 606  MASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPI 785
            +ASGSYK  G Q +  M  MK+   S+ FP+ QDL+IYGG+ LD+Q  MDR SLDGF   
Sbjct: 171  LASGSYKGLGNQGIPGMGAMKEFG-SLNFPAFQDLNIYGGDQLDLQHNMDRPSLDGFMAN 229

Query: 786  NDNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVSLTID 953
            NDNICLG++RP+ Y  + K+PL W DD+RLQ LG     L  Q+DPFK D IQ    ++D
Sbjct: 230  NDNICLGKKRPSPYDGSGKSPLIWPDDLRLQDLGSGPACLEPQDDPFKGDQIQMAPPSMD 289

Query: 954  GGNEMDPIGDVYETKPAFHGDSVGDRKYEASSAKLDRPSPQRGSLSMNRVNSMSKVG--- 1124
             G ++D I D+YE KPA  GD + ++K+EA SAKL RPSP+R  L+  R++ M   G   
Sbjct: 290  RGTDLDSISDMYEMKPALQGDGLDEKKFEA-SAKLKRPSPRRSPLAAERMSPMINTGAMP 348

Query: 1125 -GRNSNY 1142
             GRNS +
Sbjct: 349  QGRNSPF 355


>ref|XP_002523053.1| transcription factor, putative [Ricinus communis]
            gi|223537710|gb|EEF39332.1| transcription factor,
            putative [Ricinus communis]
          Length = 346

 Score =  457 bits (1176), Expect = e-126
 Identities = 235/357 (65%), Positives = 279/357 (78%), Gaps = 8/357 (2%)
 Frame = +3

Query: 96   MNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 275
            MNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV
Sbjct: 1    MNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 60

Query: 276  KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGRSMTDRNVHI 455
            KGLTLYHLKSHLQKFRLGKQPHKEF+D SIKD  ALDLQR+A+S++ +MGRSM +     
Sbjct: 61   KGLTLYHLKSHLQKFRLGKQPHKEFSDPSIKDGPALDLQRSAASTSAMMGRSMNE----- 115

Query: 456  SEAYRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACQTLAGDNMASGSYKSGG 635
                 MQMEVQRRLHEQLEVQ+HLQLRIEA GKYMQN+LEKA QTLAG+NMASGSYK  G
Sbjct: 116  -----MQMEVQRRLHEQLEVQRHLQLRIEAHGKYMQNMLEKAYQTLAGENMASGSYKGIG 170

Query: 636  IQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPINDNICLGRRR 815
             Q V D+  MKD  P + FP  QDL+IYGG+ LD+QQ MDR SLDGF P ND+ICLG++R
Sbjct: 171  NQGVPDLGAMKDFGP-LNFPQFQDLNIYGGDQLDLQQNMDRPSLDGFMPNNDHICLGKKR 229

Query: 816  PNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVSLTIDGGNEMDPIGD 983
             + Y  + K+PL W+DD+RLQ LG     LG  +D FK+D IQ    ++D G ++D I D
Sbjct: 230  SSPYSGSGKSPLIWSDDLRLQDLGSAPTCLGPPDDLFKSDQIQIAPPSMDRGTDLDSISD 289

Query: 984  VYETKPAFHGDSVGDRKYEASSAKLDRPSPQRGSLSMNRVNSMSKVGG----RNSNY 1142
            +YETKP   GD++G++K++AS+ KL+RPSP+R  L  +R++ M   G     RNS +
Sbjct: 290  IYETKPMLQGDAMGEKKFDAST-KLERPSPRRAPLPTDRMSPMINSGAMPQDRNSPF 345


>ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|222852047|gb|EEE89594.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  454 bits (1169), Expect = e-125
 Identities = 243/368 (66%), Positives = 284/368 (77%), Gaps = 11/368 (2%)
 Frame = +3

Query: 72   MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 248
            MFH+KKP TMNSH+R MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATP
Sbjct: 1    MFHTKKPSTMNSHDRPMCVQ-DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 59

Query: 249  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 428
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQ HKEFNDHSIKDASALDLQR+A+SS+G++ R
Sbjct: 60   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQLHKEFNDHSIKDASALDLQRSAASSSGMISR 119

Query: 429  SMTDRNVHISEAYRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACQTLAGD-N 605
            SM D N H+  A RMQMEVQRRLHEQLEVQ+HLQLR EAQGKY+Q++LEKACQTLAGD +
Sbjct: 120  SMND-NSHMIYAIRMQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAGDQD 178

Query: 606  MASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPI 785
            +ASGSYK  G Q V DM  MKD  P + FP  QDL+IYG   LD+   MDR SLDGF   
Sbjct: 179  LASGSYKGIGNQGVPDMGAMKDFGP-LNFPPFQDLNIYGSGQLDLLHNMDRPSLDGFMSN 237

Query: 786  N-DNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVSLTI 950
            N D+ICLG++R N Y  + K+PL W+DD+RLQ LG     LG Q+DP K D IQ     +
Sbjct: 238  NHDDICLGKKRTNPYAGSGKSPLIWSDDLRLQDLGSGLSCLGPQDDPLKGDQIQIAPPLM 297

Query: 951  DGGNEMDPIGDVYETKPAFHGDSVGDRKYEASSAKLDRPSPQRGSLSMNRVNSMSKVG-- 1124
            D G ++D +  +Y TKP   GD++ ++K EA SAK +RPSP+R  L+ +R++ M   G  
Sbjct: 298  DSGTDLDSLSGLYGTKPVHQGDALDEKKLEA-SAKTERPSPRRAPLAADRMSPMINTGVM 356

Query: 1125 --GRNSNY 1142
              GRNS +
Sbjct: 357  PQGRNSPF 364


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