BLASTX nr result

ID: Coptis23_contig00013486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013486
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN67104.1| CMP-sialic acid transporter-like protein [Vitis v...   550   e-154
ref|XP_004139975.1| PREDICTED: CMP-sialic acid transporter 4-lik...   547   e-153
emb|CBI37728.3| unnamed protein product [Vitis vinifera]              547   e-153
ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis v...   544   e-152
gb|ACN31005.1| unknown [Zea mays]                                     532   e-149

>gb|AFN67104.1| CMP-sialic acid transporter-like protein [Vitis vinifera]
          Length = 354

 Score =  550 bits (1417), Expect = e-154
 Identities = 279/354 (78%), Positives = 308/354 (87%), Gaps = 4/354 (1%)
 Frame = +1

Query: 55   MEYRKVKDEDKDTGLVEDDVERLHGNPLLGPASN----VGSNFGDRSKWRVKSVVTLALT 222
            MEYRK+KD DKD G V DD+E L G  L G  +N    +G +  DR+KW+ KS+VTLALT
Sbjct: 1    MEYRKLKDLDKDDGAVGDDIESLRGKALSGAHTNNMATLGGHSIDRTKWKRKSIVTLALT 60

Query: 223  VLTSSQAILIVWSKRAGKYEYSVTTANFSVEXXXXXXXXXXXXRIWSIEGVTEDNKLSTS 402
            VLTSSQAILIVWSKRAGKYEYSVTTANF VE            RIW  EGVT+DN+LS+S
Sbjct: 61   VLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALVRIWGNEGVTDDNRLSSS 120

Query: 403  FNEVIVYPIPAVLYLVKNLLQYYIFAYVDAPSYQILKNLNIISTGVLYRIILKRKLSEIQ 582
             +EVIV+PIPA LYLVKNLLQYYIFAYVDAP YQILKNLNIISTGVLYRIILK+KLSEIQ
Sbjct: 121  LDEVIVFPIPAALYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQ 180

Query: 583  WAAFILLCAGCTTAQLDSSSDRVLQTPYQGWMMAIVMALLSGFAGVYTEAIMKKRPSRNV 762
            WAAFILLCAGCTTAQL+ SSD VLQ P+QGWMMAIVMALLSGFAGVYTEAI+KKRPSRN+
Sbjct: 181  WAAFILLCAGCTTAQLNPSSDHVLQAPFQGWMMAIVMALLSGFAGVYTEAIIKKRPSRNI 240

Query: 763  NVQNFWLYVFGMGFNAIAIFVQDFDAVLNKGFFHGYTFITACMILNHALSGIAVSMVMKY 942
            NVQNFWLYVFGM FNA+AI +QDFDAV+NKGFFHGY+ IT  MI+NHALSGIAVSMVMKY
Sbjct: 241  NVQNFWLYVFGMVFNAVAIVIQDFDAVMNKGFFHGYSLITVLMIVNHALSGIAVSMVMKY 300

Query: 943  ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSISVYLHSVSKVQK 1104
            ADNIVKVYSTSVAMLLTA+VSVFLFGFHLSLAFFLGSTVVS+S+YLHS+ K+Q+
Sbjct: 301  ADNIVKVYSTSVAMLLTALVSVFLFGFHLSLAFFLGSTVVSVSIYLHSIGKLQR 354


>ref|XP_004139975.1| PREDICTED: CMP-sialic acid transporter 4-like [Cucumis sativus]
          Length = 360

 Score =  547 bits (1410), Expect = e-153
 Identities = 278/360 (77%), Positives = 311/360 (86%), Gaps = 10/360 (2%)
 Frame = +1

Query: 55   MEYRKVKDEDKDTG--------LVEDDVERLH-GNPLLGP-ASNVGSNFGDRSKWRVKSV 204
            MEYR++KD++KD           V DD+E L  G P+ G   + +G+N  DRSKW+ KS+
Sbjct: 1    MEYRRIKDQEKDGNGDGSGVGVAVADDIESLRAGKPISGSNVAKLGANSFDRSKWQQKSI 60

Query: 205  VTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFSVEXXXXXXXXXXXXRIWSIEGVTED 384
            VTLALTVLTSSQAILIVWSKRAGKYEYSVTTANF VE            RIW  EGVTED
Sbjct: 61   VTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCVLSLAALSRIWGSEGVTED 120

Query: 385  NKLSTSFNEVIVYPIPAVLYLVKNLLQYYIFAYVDAPSYQILKNLNIISTGVLYRIILKR 564
            N+LST+++EVIVYPIPA LYLVKNLLQYYIFAYVDAP YQILKN NIISTG+LYRIILK+
Sbjct: 121  NRLSTTYDEVIVYPIPAALYLVKNLLQYYIFAYVDAPGYQILKNFNIISTGILYRIILKK 180

Query: 565  KLSEIQWAAFILLCAGCTTAQLDSSSDRVLQTPYQGWMMAIVMALLSGFAGVYTEAIMKK 744
            KLSEIQWAAFILLCAGCTTAQL+S+SD VLQTP+QGW+MAI+MALLSGFAGVYTEAI+KK
Sbjct: 181  KLSEIQWAAFILLCAGCTTAQLNSNSDHVLQTPFQGWVMAIIMALLSGFAGVYTEAIIKK 240

Query: 745  RPSRNVNVQNFWLYVFGMGFNAIAIFVQDFDAVLNKGFFHGYTFITACMILNHALSGIAV 924
            RPSRNVNVQNFWLYVFGM FNAIA+ +QDFDA+ NKGFFHGY+FIT  MILNHALSGIAV
Sbjct: 241  RPSRNVNVQNFWLYVFGMAFNAIAMVIQDFDAIANKGFFHGYSFITVLMILNHALSGIAV 300

Query: 925  SMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSISVYLHSVSKVQK 1104
            SMV+KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVS++VYLHS+ K+Q+
Sbjct: 301  SMVLKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVAVYLHSIGKLQR 360


>emb|CBI37728.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  547 bits (1409), Expect = e-153
 Identities = 278/354 (78%), Positives = 307/354 (86%), Gaps = 4/354 (1%)
 Frame = +1

Query: 55   MEYRKVKDEDKDTGLVEDDVERLHGNPLLGPASN----VGSNFGDRSKWRVKSVVTLALT 222
            MEYRK+KD DKD G   DD+E L G  L G  +N    +G +  DR+KW+ KS+VTLALT
Sbjct: 1    MEYRKLKDLDKDGGAGGDDIESLRGKALSGAHTNNMATLGGHSIDRTKWKRKSIVTLALT 60

Query: 223  VLTSSQAILIVWSKRAGKYEYSVTTANFSVEXXXXXXXXXXXXRIWSIEGVTEDNKLSTS 402
            VLTSSQAILIVWSKRAGKYEYSVTTANF VE            RIW  EGVT+DN+LS+S
Sbjct: 61   VLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALVRIWGNEGVTDDNRLSSS 120

Query: 403  FNEVIVYPIPAVLYLVKNLLQYYIFAYVDAPSYQILKNLNIISTGVLYRIILKRKLSEIQ 582
             +EVIV+PIPA LYLVKNLLQYYIFAYVDAP YQILKNLNIISTGVLYRIILK+KLSEIQ
Sbjct: 121  LDEVIVFPIPAALYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQ 180

Query: 583  WAAFILLCAGCTTAQLDSSSDRVLQTPYQGWMMAIVMALLSGFAGVYTEAIMKKRPSRNV 762
            WAAFILLCAGCTTAQL+ SSD VLQ P+QGWMMAIVMALLSGFAGVYTEAI+KKRPSRN+
Sbjct: 181  WAAFILLCAGCTTAQLNPSSDHVLQAPFQGWMMAIVMALLSGFAGVYTEAIIKKRPSRNI 240

Query: 763  NVQNFWLYVFGMGFNAIAIFVQDFDAVLNKGFFHGYTFITACMILNHALSGIAVSMVMKY 942
            NVQNFWLYVFGM FNA+AI +QDFDAV+NKGFFHGY+ IT  MI+NHALSGIAVSMVMKY
Sbjct: 241  NVQNFWLYVFGMVFNAVAIVIQDFDAVMNKGFFHGYSLITVLMIVNHALSGIAVSMVMKY 300

Query: 943  ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSISVYLHSVSKVQK 1104
            ADNIVKVYSTSVAMLLTA+VSVFLFGFHLSLAFFLGSTVVS+S+YLHS+ K+Q+
Sbjct: 301  ADNIVKVYSTSVAMLLTALVSVFLFGFHLSLAFFLGSTVVSVSIYLHSIGKLQR 354


>ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  544 bits (1402), Expect = e-152
 Identities = 277/352 (78%), Positives = 305/352 (86%), Gaps = 4/352 (1%)
 Frame = +1

Query: 55   MEYRKVKDEDKDTGLVEDDVERLHGNPLLGPASN----VGSNFGDRSKWRVKSVVTLALT 222
            MEYRK+KD DKD G   DD+E L G  L G  +N    +G +  DR+KW+ KS+VTLALT
Sbjct: 1    MEYRKLKDLDKDGGAGGDDIESLRGKALSGAHTNNMATLGGHSIDRTKWKRKSIVTLALT 60

Query: 223  VLTSSQAILIVWSKRAGKYEYSVTTANFSVEXXXXXXXXXXXXRIWSIEGVTEDNKLSTS 402
            VLTSSQAILIVWSKRAGKYEYSVTTANF VE            RIW  EGVT+DN+LS+S
Sbjct: 61   VLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALVRIWGNEGVTDDNRLSSS 120

Query: 403  FNEVIVYPIPAVLYLVKNLLQYYIFAYVDAPSYQILKNLNIISTGVLYRIILKRKLSEIQ 582
             +EVIV+PIPA LYLVKNLLQYYIFAYVDAP YQILKNLNIISTGVLYRIILK+KLSEIQ
Sbjct: 121  LDEVIVFPIPAALYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQ 180

Query: 583  WAAFILLCAGCTTAQLDSSSDRVLQTPYQGWMMAIVMALLSGFAGVYTEAIMKKRPSRNV 762
            WAAFILLCAGCTTAQL+ SSD VLQ P+QGWMMAIVMALLSGFAGVYTEAI+KKRPSRN+
Sbjct: 181  WAAFILLCAGCTTAQLNPSSDHVLQAPFQGWMMAIVMALLSGFAGVYTEAIIKKRPSRNI 240

Query: 763  NVQNFWLYVFGMGFNAIAIFVQDFDAVLNKGFFHGYTFITACMILNHALSGIAVSMVMKY 942
            NVQNFWLYVFGM FNA+AI +QDFDAV+NKGFFHGY+ IT  MI+NHALSGIAVSMVMKY
Sbjct: 241  NVQNFWLYVFGMVFNAVAIVIQDFDAVMNKGFFHGYSLITVLMIVNHALSGIAVSMVMKY 300

Query: 943  ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSISVYLHSVSKV 1098
            ADNIVKVYSTSVAMLLTA+VSVFLFGFHLSLAFFLGSTVVS+S+YLHS+ K+
Sbjct: 301  ADNIVKVYSTSVAMLLTALVSVFLFGFHLSLAFFLGSTVVSVSIYLHSIGKL 352


>gb|ACN31005.1| unknown [Zea mays]
          Length = 355

 Score =  532 bits (1370), Expect = e-149
 Identities = 274/354 (77%), Positives = 304/354 (85%), Gaps = 5/354 (1%)
 Frame = +1

Query: 55   MEYRKVKDEDKDTGLVEDDVERLHGNPL-----LGPASNVGSNFGDRSKWRVKSVVTLAL 219
            MEYR+VKD++    L + DVE L G  L     +GPAS  G+     S W++KSVVTLAL
Sbjct: 1    MEYRRVKDQEIYDDLSQKDVESLSGRTLSSANTIGPASAGGAKAN--SSWKLKSVVTLAL 58

Query: 220  TVLTSSQAILIVWSKRAGKYEYSVTTANFSVEXXXXXXXXXXXXRIWSIEGVTEDNKLST 399
            T+LTSSQAILIVWSKRAGKYEYSVTTANFSVE            R W+  GVT+DN+L+T
Sbjct: 59   TLLTSSQAILIVWSKRAGKYEYSVTTANFSVEALKCLLSLAALFRTWNCHGVTDDNRLTT 118

Query: 400  SFNEVIVYPIPAVLYLVKNLLQYYIFAYVDAPSYQILKNLNIISTGVLYRIILKRKLSEI 579
            SF+EV VYPIPAVLY+VKNLLQYYIF YVDAP+YQILKNLNIISTGVLYRIILK+KLSEI
Sbjct: 119  SFDEVGVYPIPAVLYMVKNLLQYYIFVYVDAPAYQILKNLNIISTGVLYRIILKKKLSEI 178

Query: 580  QWAAFILLCAGCTTAQLDSSSDRVLQTPYQGWMMAIVMALLSGFAGVYTEAIMKKRPSRN 759
            QWAAF+LLCAGCTTAQL+ SSD VLQTP QGWMMAIVMALLSGFAGVYTEAI+KKRPSRN
Sbjct: 179  QWAAFVLLCAGCTTAQLNPSSDHVLQTPIQGWMMAIVMALLSGFAGVYTEAIIKKRPSRN 238

Query: 760  VNVQNFWLYVFGMGFNAIAIFVQDFDAVLNKGFFHGYTFITACMILNHALSGIAVSMVMK 939
            +NVQNFWLY+FG+ FN +AI VQD+DAV+NKGFFHGY+FIT  MILNHALSGIAVSMVMK
Sbjct: 239  INVQNFWLYIFGVIFNLVAICVQDYDAVMNKGFFHGYSFITVLMILNHALSGIAVSMVMK 298

Query: 940  YADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSISVYLHSVSKVQ 1101
            YADNIVKVYSTSVAMLLTAVVSVFLF FHLSLAFFLGSTVVS+SVYLHS+ K+Q
Sbjct: 299  YADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSIGKLQ 352


Top