BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013485
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]   106   1e-20
ref|XP_002509461.1| smg-7, putative [Ricinus communis] gi|223549...    95   3e-17
ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_003541733.1| PREDICTED: protein SMG7-like [Glycine max]         77   6e-12

>emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]
          Length = 931

 Score =  106 bits (264), Expect = 1e-20
 Identities = 81/253 (32%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
 Frame = +1

Query: 97   GQQDVKSTSSLQSPTSNIGHGSTYEGDSVIGHHNSSATIHHMXXXXXXXXXXXXXXXDDA 276
            G + V+ T       S IG       +SV    + S T+H+                DDA
Sbjct: 673  GLEPVEETVEETLSASFIGLSMDETKNSVTASEHVSPTLHYSSPPYIAPMPSAPLLPDDA 732

Query: 277  TWFSGNLSKYP--KDSYLDGVKPLIPVASQVSSYSNLTGIQVPPNFSPNIPRFNDGYTAY 450
             WFSG  S +P  K   +         AS +S YSN T    P +++P+IP    G++  
Sbjct: 733  VWFSGVPSSFPECKSPGVINETGAFMGASPLSGYSNWTATHGPVDYTPSIPGLIYGHSPL 792

Query: 451  PAQNNSAQWLHQYPVNHDRPQDXXXXXXXXXXXXGR---FQDHSVSRVAPFDQSTNPSDV 621
                +S +W H Y  N +  Q             G    F  +  SR   FD+  NP   
Sbjct: 793  LGARSSPEWFHHYNYNQNFEQANIHMRPVQFSAAGNLGDFHGYDASRFDLFDRWGNPLAS 852

Query: 622  NSRRYLEDLPYHPG--FYSGTDT---------YPGPSPYGRGAVRDLRSEQQLFLKYLKE 768
            N   YLE  P H G     G D          Y  P PYG GA  DLR EQQ  L+YLKE
Sbjct: 853  NPLIYLESPPLHSGSTLVYGVDEQRREKLFHGYQRPFPYGYGAATDLRDEQQQLLQYLKE 912

Query: 769  KEWHLLQEAQLRG 807
            KE  L Q+ Q+RG
Sbjct: 913  KELRLPQDPQVRG 925


>ref|XP_002509461.1| smg-7, putative [Ricinus communis] gi|223549360|gb|EEF50848.1| smg-7,
            putative [Ricinus communis]
          Length = 1008

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 77/228 (33%), Positives = 95/228 (41%), Gaps = 17/228 (7%)
 Frame = +1

Query: 175  DSVIGHHNSSATIHHMXXXXXXXXXXXXXXXDDATWFSG---NLSKYPKDSYLDGVKPLI 345
            +SVI   +   TIH+                DDA W +G    LS Y     L+    L 
Sbjct: 781  NSVISSGHEPVTIHNSSIAYSAPVPSAPFLPDDAVWINGIQSTLSNYNGAGNLNRTNNLF 840

Query: 346  PVASQVSSYSNLTGIQVPPNFSPNIPRFNDGYTAYPAQNNSAQWLHQYPVNHD---RPQD 516
              ASQVS YSN TG   P ++  NIP F DG      +  S++WL QY  NH+    P  
Sbjct: 841  D-ASQVSGYSNRTGSYQPLDYGLNIPGFIDGCPPM-RRMTSSEWLRQYRENHNLERTPSH 898

Query: 517  XXXXXXXXXXXXGRFQDHSVSRVAPFDQSTNPSDVNSRRYLEDLPYHPGFYSGTDT---- 684
                        G    + +S+   F+Q   P   N   Y E    H GF  G  T    
Sbjct: 899  VWPGNAYAAVNTGNLYGNDMSKSGLFEQFGVPLVANPLIYEESSSLHSGFPPGYGTVEHR 958

Query: 685  -------YPGPSPYGRGAVRDLRSEQQLFLKYLKEKEWHLLQEAQLRG 807
                   Y  PSPYG GA     +E Q  L+YLKEKEW L Q+  LRG
Sbjct: 959  REKLYHGYQRPSPYGCGAA----NEPQPLLQYLKEKEWLLQQDPTLRG 1002


>ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|222870849|gb|EEF07980.1|
            predicted protein [Populus trichocarpa]
          Length = 1035

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 76/254 (29%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
 Frame = +1

Query: 91   GVGQQDVKSTSSLQSPTS-NIGHGSTYEGDSVIGHHNSSATIHHMXXXXXXXXXXXXXXX 267
            G G     S + +Q   S ++   S  E DSVI   +   T H+                
Sbjct: 781  GKGDMSRHSLAPIQEMASASMNDLSISETDSVISSTHEHLTPHYSSPPYSAPVPSAPFLP 840

Query: 268  DDATWFSG---NLSKYPKDSYLDGVKPLIPVASQVSSYSNLTGIQVPPNFSPNIPRFNDG 438
            DDA W +G     + Y     ++         SQVS YSN TG   P +  P IP F D 
Sbjct: 841  DDAVWLNGIQYTFTDYNSSGTINRTNSNYFDTSQVSGYSNWTGSHQPLHHGPGIPGFMDA 900

Query: 439  YTAYPAQNNSAQWLHQYPVNHDRPQDXXXXXXXXXXXXGRFQD-HSVSRVAPFDQSTNPS 615
            YT    Q  S++WL QY  + +  +             G   + H +SR   F+Q   P 
Sbjct: 901  YTPV-RQMTSSEWLRQYRESQNPERTTSHLWPVHSYTIGNTGNFHDISRSGLFNQWATPV 959

Query: 616  DVNSRRYLEDLPYHPGF--YSGTDT--------YPGPSPYGRGAVRDLRSEQQLFLKYLK 765
              N   Y    P  PGF    GTD         Y  P+PYG G +    +E +  L++LK
Sbjct: 960  ASNQLVYEGSPPMLPGFPPVHGTDDQRNKFFYGYQRPNPYGCGGM----NEPEPLLQHLK 1015

Query: 766  EKEWHLLQEAQLRG 807
            EKEW L Q+ + RG
Sbjct: 1016 EKEWLLQQDPKFRG 1029


>ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|222848753|gb|EEE86300.1|
            predicted protein [Populus trichocarpa]
          Length = 1028

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 79/262 (30%), Positives = 102/262 (38%), Gaps = 23/262 (8%)
 Frame = +1

Query: 91   GVGQQDVKSTSSLQ----SPTSNIGHGSTY-----EGDSVIGHHNSSATIHHMXXXXXXX 243
            G+  + VK  S +     +P   I   S       E DSVI   + S T HH        
Sbjct: 766  GLSNERVKGKSDMSKHSLAPIQEIASASMNDLCISETDSVISLGHESMTPHHSFRPYSAP 825

Query: 244  XXXXXXXXDDATWFSGNLSK---YPKDSYLDGVKPLIPVASQVSSYSNLTGIQVPPNFSP 414
                    DDA   +G  S    Y     ++          QVS Y N TG   P ++ P
Sbjct: 826  VPSAPFLPDDAVPLNGRQSTFTDYNSAGTINRTNSNYFETPQVSGYLNWTGSHQPLDYGP 885

Query: 415  NIPRFNDGYTAYPAQNNSAQWLHQYPVNHDRPQDXXXXXXXXXXXXGRFQD-HSVSRVAP 591
             IP F D YT    +  S++WL QY  + +  +             G   + H +S    
Sbjct: 886  GIPGFMDAYTPV-RRMTSSEWLRQYRESQNLERSTSHLWPVHSYAIGNTGNFHDMSSSGL 944

Query: 592  FDQSTNPSDVNSRRYLEDLPYHPGF---YSGTDT-------YPGPSPYGRGAVRDLRSEQ 741
            FDQ   P   N   Y    P HPGF   Y   D        Y  PSPYG G    + +E 
Sbjct: 945  FDQRGIPWASNQLIYEGSPPLHPGFPPVYETVDQRNKFIYGYQRPSPYGCG----VTNEP 1000

Query: 742  QLFLKYLKEKEWHLLQEAQLRG 807
            +  L+YLKEKEW L Q+  LRG
Sbjct: 1001 EPLLQYLKEKEWLLQQDPTLRG 1022


>ref|XP_003541733.1| PREDICTED: protein SMG7-like [Glycine max]
          Length = 987

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 69/249 (27%), Positives = 98/249 (39%), Gaps = 18/249 (7%)
 Frame = +1

Query: 115  STSSLQSPTSNIGHGSTYEG--DSVIGHHNSSATIHHMXXXXXXXXXXXXXXXDDATWFS 288
            ++SSL S + N    S      +S   H++SSAT                   D+A WF+
Sbjct: 748  ASSSLASISINKAENSVTSSMVESSNFHYSSSATYS-------LPVPSAPLLPDNAAWFT 800

Query: 289  GNLSKYPKDSYLDGVKPLIPVASQVSSYSNLTGIQVPPNFSPNIPRFNDGYTAYPAQNNS 468
               S      + D   P        S Y + +    P  + P  P  + GYT  P +  S
Sbjct: 801  DAQSSLSSPLFPDNSVPK-------SGYPDWSSTYGPHGYDPRFPVLSSGYTP-PGRMTS 852

Query: 469  AQWLHQYPVNH--DRPQDXXXXXXXXXXXXGRFQD---HSVSRVAPFDQSTNPSDVNSRR 633
            ++WL  Y  N+  +R  +            G   +   H   R   FD+ +NP   N   
Sbjct: 853  SEWLRWYRENYKPERTNNYMQPTHLNSPGPGNHVNVPYHDTYRFGQFDRWSNPLPSNQYT 912

Query: 634  YLEDL---PYHPGFYSGTDTYPG--------PSPYGRGAVRDLRSEQQLFLKYLKEKEWH 780
            Y+E     P  PGF S    + G        P+PY  G V D R+E Q  L+ LKEKEW 
Sbjct: 913  YMESPGPPPLQPGFLSAFGEHKGSVYNNFQRPTPYACGVVTDPRNEPQSLLECLKEKEWR 972

Query: 781  LLQEAQLRG 807
            L  +  +RG
Sbjct: 973  LQPDPNVRG 981