BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013481
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    72   4e-11
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    65   6e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    65   7e-09
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    63   2e-08

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
 Frame = +1

Query: 1    VVLTYPKNPSEDCIAVSLSKN---IAIARPGDKTWTTIQNIAF-VMDVIYFKQQLYGICA 168
            V+ + P +P  DC  + +  +   +A  +PG +TWT +++ +  V D+IYF      +  
Sbjct: 1067 VLSSAPSSP--DCAVMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNL 1124

Query: 169  NRKLYILDIKSNPPKASEVNVSYSLNRVSSV---ARYLVEWSGELLQVLRHVFPKEVGGI 339
            + +++I DI  +  K      + +L  V  +   A+YLVE  GE+  V R+++      I
Sbjct: 1125 SWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDI 1184

Query: 340  KKLCTIAFDVFKLDFAYNKWHPVKSLGQHALFLGINTSVSVLASVETIFKR 492
              + T  F V KLD    +W  V++L   + FLG N S S  AS    F++
Sbjct: 1185 PYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRK 1235


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
 Frame = +1

Query: 61  NIAIARPGDKTWTTIQNI-AFVMDVIYFKQQLYGICANRKLYILDIKSNPPKASEVNVSY 237
           ++A  + GD+ W  ++N  +F  DVIYF    Y +    ++ + D+  N PK S +    
Sbjct: 192 DLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETP- 250

Query: 238 SLNRVSSVARYLVEWSGELLQVLRHVFPKEVGGIKKLCTIAFDVFKLDFAYNKWHPVKSL 417
              ++    +YLV     LL V R++       I    T  F+VFKLD    +W  V SL
Sbjct: 251 --RQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308

Query: 418 GQHALFLGINTSVSVLAS 471
           G   LF+G N+S+++ AS
Sbjct: 309 GDMMLFIGENSSLALSAS 326


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
 Frame = +1

Query: 1   VVLTYPKNPSEDCIAVSLSK--NIAIARPGDKTWTTIQNI-AFVMDVIYFKQQLYGICAN 171
           ++ + P N S+    V L++  ++A+ R  D +WT +++  ++  DVI+ +   Y +   
Sbjct: 166 ILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKY 225

Query: 172 RKLYILDIKSNPPKASEVNVSYSLNRVSSVARYLVEWSGELLQVLRH------VFPKEVG 333
             + + D+  + P+ S + +     +     +YLVE   ELL V R+      V P +  
Sbjct: 226 GSIAVCDVSGSSPRVSIIEMP---QQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTS 282

Query: 334 GIKKLCTIAFDVFKLDFAYNKWHPVKSLGQHALFLGINTSVSVLASVE 477
            I +  T  F V +LD    +W  V SLG  ALFLG N S+S L+SV+
Sbjct: 283 LIYR--TTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLS-LSSVD 327


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
 Frame = +1

Query: 61  NIAIARPGDKTWTTIQNI-AFVMDVIYFKQQLYGICANRKLYILDIKSNPPKASEVNVSY 237
           ++A  R GDK+W+ ++N  +F  DVI+     Y +    ++ I DI S+ P+ S +    
Sbjct: 191 DLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETP- 249

Query: 238 SLNRVSSVARYLVEWSGELLQVLRHVFPK------EVGGIKKLCTIAFDVFKLDFAYNKW 399
              +     +YLV    ELL V R++  +      ++       TI F+VF+LD+   +W
Sbjct: 250 --RQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQW 307

Query: 400 HPVKSLGQHALFLGINTSVSVLAS 471
             + +LG  ALF+G N+S+S+ A+
Sbjct: 308 LRMSTLGDKALFIGENSSLSLSAT 331


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
 Frame = +1

Query: 1   VVLTYPKNPSE-DCIAVSLSKN---IAIARPGDKTWTTIQNIAF-VMDVIYFKQQLYGIC 165
           VVL+   +PS  +C+ +++  N   +A  +PGDK W T+++      D++Y+K   Y I 
Sbjct: 150 VVLSSTPSPSNANCVIMAIHSNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAI- 208

Query: 166 ANRKLYILDIKSNP---PKASEVNVSYSLNRVSSVARYLVEWSGELLQVLRHVFPK---- 324
              K+   DI  +P   P A    + Y   R      YLVE SG LL VLR++  K    
Sbjct: 209 GRSKVVQCDIGDDPRVIPFALLPKMGYFQYR------YLVESSGCLLYVLRYMDLKDNED 262

Query: 325 ------EVGGIK-------------KLCTIAFDVFKLDFAYNKWHPVKSLGQHALFLGIN 447
                 E  G K             +  T  F V+  DF   KW  +K++ + AL LG N
Sbjct: 263 PLKLRYETTGFKVFDLDSDKRKFSYRYETTTFKVYNFDFDQKKWKLIKNIKEKALLLGHN 322

Query: 448 TSVSV 462
            ++S+
Sbjct: 323 QAISI 327