BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013475
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    87   1e-15
emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    87   1e-15
ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    72   6e-11
ref|XP_004138220.1| PREDICTED: translation initiation factor eIF...    67   1e-09

>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 63/138 (45%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
 Frame = -3

Query: 395 RTTSRMVIDPKIRQVGFFTSNESQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVMIPPP 216
           R  +R+VIDPK+RQVGFF    S     RT S P E                 PVMIPPP
Sbjct: 4   RRGARVVIDPKVRQVGFFAPGAS---PGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 60

Query: 215 RHVSDNMTFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGDGDFLEG 42
           RH SDN+    P    PLRR   GD +  GSYNPSE F  +    S  S KVGDG+F E 
Sbjct: 61  RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYS-KVGDGEFSED 117

Query: 41  RKGKG------GGKVASS 6
             G G       GKVASS
Sbjct: 118 ASGAGWTHRGNSGKVASS 135


>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 63/138 (45%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
 Frame = -3

Query: 395 RTTSRMVIDPKIRQVGFFTSNESQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVMIPPP 216
           R  +R+VIDPK+RQVGFF    S     RT S P E                 PVMIPPP
Sbjct: 69  RRGARVVIDPKVRQVGFFAPGAS---PGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 125

Query: 215 RHVSDNMTFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGDGDFLEG 42
           RH SDN+    P    PLRR   GD +  GSYNPSE F  +    S  S KVGDG+F E 
Sbjct: 126 RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYS-KVGDGEFSED 182

Query: 41  RKGKG------GGKVASS 6
             G G       GKVASS
Sbjct: 183 ASGAGWTHRGNSGKVASS 200


>ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 54/131 (41%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
 Frame = -3

Query: 407 METRRTTSRMVIDPKIRQVGFFTSNESQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 228
           M+ RR T+ +   P++RQVGFFT N      +RT SFP                   PVM
Sbjct: 1   MDARRATTTV---PRVRQVGFFTPNAPPAQPSRTQSFP-RDSSSPPLSNSPASNSLSPVM 56

Query: 227 IPPPRHVSDNMTFKFPMSPL---------RRLSSGDNVLHGSYNPSELFLSSGAGLSSES 75
           IPPPRH+SDN+  +   SPL         R + S    + GSYNPSE  L S   L+S S
Sbjct: 57  IPPPRHLSDNLVHR-ATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSSPPLASPS 115

Query: 74  NKV-GDGDFLE 45
           ++V GDGDF E
Sbjct: 116 SRVIGDGDFSE 126


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 57/146 (39%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
 Frame = -3

Query: 407 METRRTTSRMVIDPKIRQVGFFTSNESQIPANRTHSFPVE-XXXXXXXXXXXXXXXXXPV 231
           ME RRT SR+ IDPK+RQVGFF     +   +R+ S P+                   PV
Sbjct: 1   MEARRT-SRIPIDPKVRQVGFFAPGALR---DRSQSGPLGFSSSPPVSNISPTGNSLSPV 56

Query: 230 MIPPPRHVSDNMTFKFPM------SPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNK 69
           MIPPPRH SDN     P+      S LR  +  D +  GSY+ SEL L + A     S++
Sbjct: 57  MIPPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSA-----SSR 111

Query: 68  VGDGDFLEGR----KGKGGGKVASSL 3
           +GDG+F E      +    GK ASSL
Sbjct: 112 IGDGEFSEDYSVFFRRSSSGKFASSL 137


>ref|XP_004138220.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Cucumis sativus] gi|449477114|ref|XP_004154933.1|
           PREDICTED: translation initiation factor eIF-2B subunit
           delta-like [Cucumis sativus]
          Length = 643

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
 Frame = -3

Query: 407 METRRTTSRMVIDPKIRQVGFFTSNESQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 228
           M+ RR +   V++PKIRQVGFFT +    P  R+ S P +                  VM
Sbjct: 1   MDARRGSR--VVNPKIRQVGFFTLDPPN-PPGRSLSGPADCTPSQQSLSPPSNSLSP-VM 56

Query: 227 IPPPRHVSDNMTFK---FPM-SPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGD 60
           IPPPRH+SDN+  +   FP+  P     S D++  GSYNPSE+ L+     +S S ++GD
Sbjct: 57  IPPPRHLSDNLASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLA-----TSPSGRIGD 111

Query: 59  GDFLEGR--------KGKGGGKVASS 6
            +             +  G GK+ASS
Sbjct: 112 EELDMSEDSFTSVPYRRSGSGKIASS 137