BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013468
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   184   1e-44
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   178   7e-43
ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab...   167   2e-39
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   166   3e-39

>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  184 bits (468), Expect = 1e-44
 Identities = 102/189 (53%), Positives = 119/189 (62%), Gaps = 6/189 (3%)
 Frame = -2

Query: 634 MSAPSRFLTGNNXXXXXXXXXXPLAVDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYT 455
           M+ PSRFL G N            AVDSDF                    ARCAWLRR +
Sbjct: 1   MTHPSRFLGGVNSSATASQESA--AVDSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58

Query: 454 GDALR---SQLHVSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICLTEFVDGDEIR 284
           G A     S     ANKGLKKKILRS+P++T+     E  G L DCAICLTEFV GDEIR
Sbjct: 59  GAANLPGGSAPQTPANKGLKKKILRSLPKVTY---AAETAGNLTDCAICLTEFVGGDEIR 115

Query: 283 VLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSATS---SRAVIEAR 113
           VLPQCGHGFHVGCID WLGSH SCPSCR++LV  RC+KCGGVP +S+++   + + ++ R
Sbjct: 116 VLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPASSSSTGAETESRLKER 175

Query: 112 EDHVNSFLP 86
           ED VN FLP
Sbjct: 176 EDDVNRFLP 184


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  178 bits (452), Expect = 7e-43
 Identities = 99/185 (53%), Positives = 116/185 (62%), Gaps = 6/185 (3%)
 Frame = -2

Query: 634 MSAPSRFLTGNNXXXXXXXXXXPLAVDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYT 455
           M+ PSRFL G N            AVDSDF                    ARCAWLRR +
Sbjct: 1   MTHPSRFLGGVNSSATASQESA--AVDSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58

Query: 454 GDALR---SQLHVSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICLTEFVDGDEIR 284
           G A     S     ANKGLKKKILRS+P++T+     E  G L DCAICLTEFV GDEIR
Sbjct: 59  GAANLPGGSAPQTPANKGLKKKILRSLPKVTY---AAETAGNLTDCAICLTEFVGGDEIR 115

Query: 283 VLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSATS---SRAVIEAR 113
           VLPQCGHGFHVGCID WLGSH SCPSCR++LV  RC+KCGGVP +S+++   + + ++ R
Sbjct: 116 VLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPASSSSTGAETESRLKER 175

Query: 112 EDHVN 98
           ED VN
Sbjct: 176 EDDVN 180


>ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|222843629|gb|EEE81176.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  167 bits (424), Expect = 1e-39
 Identities = 90/175 (51%), Positives = 107/175 (61%), Gaps = 17/175 (9%)
 Frame = -2

Query: 559 VDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYTGDALRSQLHVS----ANKGLKKKIL 392
           VDSDF                    ARCAWLRR++       +       ANKGLKKK+L
Sbjct: 29  VDSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVL 88

Query: 391 RSIPRLTFNGNGEEVNGKLVDCAICLTEFVDGDEIRVLPQCGHGFHVGCIDMWLGSHSSC 212
           RS+P+ TF+   E+ +GKL DCAICLTEF  GDEIRVLPQCGHGFHV CID WLGSHSSC
Sbjct: 89  RSLPKQTFS---EDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSC 145

Query: 211 PSCRRVLVFKRCKKCGGVPETSA-------------TSSRAVIEAREDHVNSFLP 86
           PSCR++LV  RC+KCGG+P  S+             T + A ++ RED  N FLP
Sbjct: 146 PSCRQILVVARCQKCGGLPSGSSSSNGGGGGGGGAETETEASLKEREDGANRFLP 200


>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
           lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
           ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  167 bits (423), Expect = 2e-39
 Identities = 82/138 (59%), Positives = 98/138 (71%), Gaps = 6/138 (4%)
 Frame = -2

Query: 481 RCAWLRRYTGDALRSQLH----VSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICL 314
           RCAWLRR        Q H     +ANKGLKKK+LRS+P+LT++ +      KLV+CAICL
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAE-KLVECAICL 108

Query: 313 TEFVDGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSATSS 134
           TEF  GDE+RVLPQCGHGFHV CID WLGSHSSCPSCR++LV  RC KCGG+P +S + S
Sbjct: 109 TEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSTSGS 168

Query: 133 R--AVIEAREDHVNSFLP 86
                I+ RED   +FLP
Sbjct: 169 EPDTRIKQREDDPANFLP 186


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  166 bits (421), Expect = 3e-39
 Identities = 81/138 (58%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
 Frame = -2

Query: 481 RCAWLRRYTGDALRSQLH----VSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICL 314
           RCAWLRR        Q H     +ANKGLKKK+LRS+P+LT++ +      KLV+CAICL
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAE-KLVECAICL 108

Query: 313 TEFVDGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSATSS 134
           TEF  GDE+RVLPQCGHGFHV CID WLGSHSSCPSCR++LV  RC KCGG+P +S++  
Sbjct: 109 TEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGP 168

Query: 133 R--AVIEAREDHVNSFLP 86
                I+ RED  ++FLP
Sbjct: 169 EPDTRIKQREDGPDNFLP 186