BLASTX nr result

ID: Coptis23_contig00013467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013467
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    47   4e-08
ref|XP_002890947.1| hypothetical protein ARALYDRAFT_473357 [Arab...    48   2e-07
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    47   8e-07
ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...    47   4e-06
gb|AFK40283.1| unknown [Lotus japonicus]                               44   7e-06

>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 47.4 bits (111), Expect(2) = 4e-08
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +3

Query: 189 EFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGN 317
           EFKRSK KD+KL+G  C+L  S AF LGV A   L  A I+GN
Sbjct: 30  EFKRSKKKDVKLNGKLCYLAESGAFQLGVAALICLFIAHILGN 72



 Score = 35.0 bits (79), Expect(2) = 4e-08
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 59  VIIFFGLVAFSACIASEFKRSK 124
           +I F GL+AF  C+A+EFKRSK
Sbjct: 14  IIAFLGLMAFGLCVAAEFKRSK 35


>ref|XP_002890947.1| hypothetical protein ARALYDRAFT_473357 [Arabidopsis lyrata subsp.
           lyrata] gi|297336789|gb|EFH67206.1| hypothetical protein
           ARALYDRAFT_473357 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = +3

Query: 189 EFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGN 317
           EF+++K KD+K DG SC+LP + AF LG+ A   +  AQI+GN
Sbjct: 37  EFQKAKGKDLKWDGESCYLPENRAFGLGIAALACVSVAQIVGN 79



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 14  LQAQMKKRQHGLMYFVIIF-----FGLVAFSACIASEFKRSK 124
           ++ Q +  ++GL  F I F     FGLVAF  C+++EF+++K
Sbjct: 1   MEVQEQYNRNGLPKFSIFFMFIFLFGLVAFFLCLSAEFQKAK 42


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 46.6 bits (109), Expect(2) = 8e-07
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = +3

Query: 189 EFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGN 317
           E KR+K  D++ +G  CHLP SPAF LG+ +   L+ +QI+GN
Sbjct: 36  ETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLSQIVGN 78



 Score = 31.2 bits (69), Expect(2) = 8e-07
 Identities = 14/28 (50%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
 Frame = +2

Query: 47  LMYFVIIF--FGLVAFSACIASEFKRSK 124
           L++F+++    GLV+F+ CIASE KR+K
Sbjct: 14  LIFFIVVSHSLGLVSFTLCIASETKRNK 41


>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = +3

Query: 189 EFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGN 317
           E KR+K  D++ +G  CHLP SPAF LGV +   L+ +QI+GN
Sbjct: 36  ETKRNKKGDLRWNGKLCHLPSSPAFGLGVASLVCLVLSQIVGN 78



 Score = 28.5 bits (62), Expect(2) = 4e-06
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
 Frame = +2

Query: 47  LMYFVIIF--FGLVAFSACIASEFKRSK 124
           L++ ++I    GLV+F+ CIASE KR+K
Sbjct: 14  LIFCIVISHSLGLVSFTLCIASETKRNK 41


>gb|AFK40283.1| unknown [Lotus japonicus]
          Length = 142

 Score = 44.3 bits (103), Expect(2) = 7e-06
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +3

Query: 189 EFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGN 317
           EFKR+K +D++ +G  C+LP S AF LG+ A  S   AQ+I N
Sbjct: 33  EFKRNKKEDLRWNGKLCYLPSSQAFGLGIAALVSFFVAQVIVN 75



 Score = 30.4 bits (67), Expect(2) = 7e-06
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 47  LMYFVIIFFGLVAFSACIASEFKRSK 124
           L   + +  GLV+F  CI SEFKR+K
Sbjct: 13  LSIIISLLLGLVSFILCIVSEFKRNK 38


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