BLASTX nr result

ID: Coptis23_contig00013434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013434
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   313   3e-83
ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   303   2e-80
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   290   2e-76

>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score =  313 bits (802), Expect = 3e-83
 Identities = 149/174 (85%), Positives = 163/174 (93%)
 Frame = +2

Query: 2   ALGFQSVHVISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVG 181
           ALGFQSVHV+SCDS+KRYRDNRHVSMGAEKWLDIE+W+S QECF VL+SRGYRIATTHVG
Sbjct: 160 ALGFQSVHVVSCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVG 219

Query: 182 IDVVSVYDMDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMH 361
           +D VS+YDMDWSCPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH
Sbjct: 220 MDAVSIYDMDWSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMH 279

Query: 362 QAVCDRTSRLGCHGDLTMKESQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPK 523
           QAVCDRTSRLG HGDLT+ ES++L AEFSLRHS SAI IAHEYAKRKA   +PK
Sbjct: 280 QAVCDRTSRLGSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPK 333


>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score =  303 bits (777), Expect = 2e-80
 Identities = 144/174 (82%), Positives = 161/174 (92%)
 Frame = +2

Query: 2   ALGFQSVHVISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVG 181
           ALGFQSVHV+SCDS+KRY+DNRHVSMGAEKWLDIE+WNS QECF VL+SRGYRIATTHVG
Sbjct: 198 ALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVG 257

Query: 182 IDVVSVYDMDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMH 361
           +D VS+YDMDW+CPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH
Sbjct: 258 MDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMH 317

Query: 362 QAVCDRTSRLGCHGDLTMKESQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPK 523
            AVCDRTSRLG HGDL+++ES+IL AEFSLRHS SA  IAHE+AKRKA   + K
Sbjct: 318 HAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSK 371


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  303 bits (777), Expect = 2e-80
 Identities = 144/174 (82%), Positives = 161/174 (92%)
 Frame = +2

Query: 2   ALGFQSVHVISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVG 181
           ALGFQSVHV+SCDS+KRY+DNRHVSMGAEKWLDIE+WNS QECF VL+SRGYRIATTHVG
Sbjct: 195 ALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVG 254

Query: 182 IDVVSVYDMDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMH 361
           +D VS+YDMDW+CPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH
Sbjct: 255 MDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMH 314

Query: 362 QAVCDRTSRLGCHGDLTMKESQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPK 523
            AVCDRTSRLG HGDL+++ES+IL AEFSLRHS SA  IAHE+AKRKA   + K
Sbjct: 315 HAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSK 368


>ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  303 bits (775), Expect = 4e-80
 Identities = 145/175 (82%), Positives = 163/175 (93%)
 Frame = +2

Query: 2   ALGFQSVHVISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVG 181
           ALGFQSVHVISCDS+KRY++NRHVSMGAEKWLDIE+W+S ++CF+VL+SRGYRIATTHVG
Sbjct: 95  ALGFQSVHVISCDSSKRYKENRHVSMGAEKWLDIELWDSAKDCFQVLKSRGYRIATTHVG 154

Query: 182 IDVVSVYDMDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMH 361
           ID VS+YDMDWSCPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH
Sbjct: 155 IDAVSIYDMDWSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMH 214

Query: 362 QAVCDRTSRLGCHGDLTMKESQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKP 526
            AVCDRTSRLG HGDLT +E+QIL AEFSLRHS + I IAH+YAKRKA  + PKP
Sbjct: 215 HAVCDRTSRLGSHGDLTPEETQILLAEFSLRHSKNMISIAHDYAKRKA--ATPKP 267


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 370

 Score =  290 bits (743), Expect = 2e-76
 Identities = 137/167 (82%), Positives = 154/167 (92%)
 Frame = +2

Query: 2   ALGFQSVHVISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVG 181
           ALGFQSVHV+SCD++KRYR+NRHVSMGAEKWLDIE+WNS  ECF++L+SRGYRI +TH+G
Sbjct: 193 ALGFQSVHVVSCDASKRYRENRHVSMGAEKWLDIELWNSTPECFKILKSRGYRIVSTHLG 252

Query: 182 IDVVSVYDMDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMH 361
            + VSVYDMDWSCPTAIVVGNESRGIS+EAL+LSDLHCSIPM GMVDSFNVSVAAGI+MH
Sbjct: 253 ANAVSVYDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMH 312

Query: 362 QAVCDRTSRLGCHGDLTMKESQILRAEFSLRHSSSAIGIAHEYAKRK 502
            AVC+RTSRLGCHGDLT +E QIL AEFSLRHS SAI IA+E AKRK
Sbjct: 313 HAVCNRTSRLGCHGDLTSEERQILLAEFSLRHSKSAISIANELAKRK 359


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