BLASTX nr result

ID: Coptis23_contig00013419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013419
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26218.1| unknown [Picea sitchensis]                              61   2e-07

>gb|ABK26218.1| unknown [Picea sitchensis]
          Length = 176

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
 Frame = -3

Query: 544 ALLNKLQTTMILVLFLLYTFFQLSHSADKNSSYY--YNQCLQSTCGNSILQFPFNKNPLC 371
           +L++ +   M+L+L  + +    S    K +  Y  Y  C   TCGNS +++PF     C
Sbjct: 4   SLVSPVFPIMLLLLTSIISAIPSSIILVKAAGDYPSYEDCAPETCGNSTIRYPFG---TC 60

Query: 370 STAYTRIHCENNSVYLTDDENPSIKFKFLQSLTKEVYSNTSVRLVDSSLIGCGPIPLSGS 191
              Y      N ++  T   +   ++  +  +TK  Y   ++++         P  +  +
Sbjct: 61  GPLYADCSEANQTILSTQSGS---RWGVVGDITKSSYFTQTLQIT--------PYDIYSN 109

Query: 190 SPNAEKWLMLGSVHYTTD-YRTGTLFNCTKEPDSGTLLNLRKVPCLECVETSNLCYFY 20
           S ++  WL+ G     +D Y  GT+ NCT+ P    + N +K   L+C E++  C+FY
Sbjct: 110 SEDSYDWLLKGVFFNLSDAYMVGTIVNCTQPPGDILVNNSKK---LDCTESNRYCFFY 164


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